Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23085 and AO356_23090 are separated by 0 nucleotides AO356_23090 and AO356_23095 are separated by 181 nucleotides
AO356_23085: AO356_23085 - Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) , at 5,165,485 to 5,166,759
_23085
AO356_23090: AO356_23090 - dihydropyrimidine dehydrogenase, at 5,166,760 to 5,168,127
_23090
AO356_23095: AO356_23095 - Dihydropyrimidinase (EC 3.5.2.2) (from data) , at 5,168,309 to 5,169,748
_23095
Position (kb)
5166
5167
5168
5169 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5165.760 kb on - strand, within AO356_23085 at 5165.774 kb on + strand, within AO356_23085 at 5165.774 kb on + strand, within AO356_23085 at 5165.774 kb on + strand, within AO356_23085 at 5166.260 kb on + strand, within AO356_23085 at 5166.260 kb on + strand, within AO356_23085 at 5166.260 kb on + strand, within AO356_23085 at 5166.261 kb on - strand, within AO356_23085 at 5166.261 kb on - strand, within AO356_23085 at 5166.294 kb on - strand, within AO356_23085 at 5166.294 kb on - strand, within AO356_23085 at 5166.569 kb on + strand, within AO356_23085 at 5166.570 kb on - strand, within AO356_23085 at 5166.674 kb on + strand at 5166.675 kb on - strand at 5166.675 kb on - strand at 5166.761 kb on + strand at 5166.777 kb on + strand at 5166.778 kb on - strand at 5167.214 kb on + strand, within AO356_23090 at 5167.355 kb on + strand, within AO356_23090 at 5167.355 kb on + strand, within AO356_23090 at 5167.355 kb on + strand, within AO356_23090 at 5167.355 kb on + strand, within AO356_23090 at 5167.356 kb on - strand, within AO356_23090 at 5167.571 kb on + strand, within AO356_23090 at 5167.572 kb on - strand, within AO356_23090 at 5167.586 kb on + strand, within AO356_23090 at 5167.994 kb on + strand at 5168.001 kb on - strand at 5168.394 kb on + strand at 5168.395 kb on - strand at 5168.614 kb on - strand, within AO356_23095 at 5168.892 kb on + strand, within AO356_23095 at 5168.971 kb on - strand, within AO356_23095 at 5168.997 kb on + strand, within AO356_23095 at 5168.997 kb on + strand, within AO356_23095 at 5169.042 kb on + strand, within AO356_23095 at 5169.042 kb on + strand, within AO356_23095 at 5169.043 kb on - strand, within AO356_23095 at 5169.043 kb on - strand, within AO356_23095
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 5,165,760 - AO356_23085 0.22 -0.2 5,165,774 + AO356_23085 0.23 +0.5 5,165,774 + AO356_23085 0.23 -0.7 5,165,774 + AO356_23085 0.23 +0.3 5,166,260 + AO356_23085 0.61 -0.8 5,166,260 + AO356_23085 0.61 +0.3 5,166,260 + AO356_23085 0.61 -0.7 5,166,261 - AO356_23085 0.61 +0.2 5,166,261 - AO356_23085 0.61 +1.0 5,166,294 - AO356_23085 0.63 -0.2 5,166,294 - AO356_23085 0.63 +0.3 5,166,569 + AO356_23085 0.85 +1.0 5,166,570 - AO356_23085 0.85 -1.2 5,166,674 + +0.0 5,166,675 - +0.7 5,166,675 - -0.1 5,166,761 + +0.1 5,166,777 + +0.2 5,166,778 - +0.3 5,167,214 + AO356_23090 0.33 +0.2 5,167,355 + AO356_23090 0.43 +0.9 5,167,355 + AO356_23090 0.43 -0.3 5,167,355 + AO356_23090 0.43 +0.9 5,167,355 + AO356_23090 0.43 +0.1 5,167,356 - AO356_23090 0.44 +0.3 5,167,571 + AO356_23090 0.59 +0.8 5,167,572 - AO356_23090 0.59 -0.3 5,167,586 + AO356_23090 0.60 +0.2 5,167,994 + +0.7 5,168,001 - -3.1 5,168,394 + +0.3 5,168,395 - -0.9 5,168,614 - AO356_23095 0.21 -0.4 5,168,892 + AO356_23095 0.40 +0.0 5,168,971 - AO356_23095 0.46 +0.3 5,168,997 + AO356_23095 0.48 -1.0 5,168,997 + AO356_23095 0.48 +1.0 5,169,042 + AO356_23095 0.51 +0.3 5,169,042 + AO356_23095 0.51 +1.2 5,169,043 - AO356_23095 0.51 +0.9 5,169,043 - AO356_23095 0.51 +0.5
Or see this region's nucleotide sequence