Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21465 and AO356_21470 are separated by 55 nucleotides AO356_21470 and AO356_21475 overlap by 4 nucleotides AO356_21475 and AO356_21480 are separated by 103 nucleotides
AO356_21465: AO356_21465 - amidophosphoribosyltransferase, at 4,812,969 to 4,814,474
_21465
AO356_21470: AO356_21470 - O-succinylhomoserine sulfhydrylase, at 4,814,530 to 4,815,741
_21470
AO356_21475: AO356_21475 - oxidoreductase, at 4,815,738 to 4,816,511
_21475
AO356_21480: AO356_21480 - tRNA-Val, at 4,816,615 to 4,816,690
_21480
Position (kb) 4814
4815
4816 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4813.575 kb on + strand, within AO356_21465 at 4813.576 kb on - strand, within AO356_21465 at 4813.656 kb on + strand, within AO356_21465 at 4813.657 kb on - strand, within AO356_21465 at 4813.657 kb on - strand, within AO356_21465 at 4814.137 kb on - strand, within AO356_21465 at 4814.271 kb on + strand, within AO356_21465 at 4814.272 kb on - strand, within AO356_21465 at 4814.358 kb on + strand at 4814.359 kb on - strand at 4814.385 kb on + strand at 4814.411 kb on + strand at 4814.412 kb on - strand at 4814.464 kb on - strand at 4814.464 kb on - strand at 4814.476 kb on + strand at 4814.476 kb on + strand at 4814.579 kb on + strand at 4814.619 kb on + strand at 4814.655 kb on + strand, within AO356_21470 at 4814.655 kb on + strand, within AO356_21470 at 4814.655 kb on + strand, within AO356_21470 at 4814.665 kb on + strand, within AO356_21470 at 4814.665 kb on + strand, within AO356_21470 at 4814.665 kb on + strand, within AO356_21470 at 4814.666 kb on - strand, within AO356_21470 at 4814.666 kb on - strand, within AO356_21470 at 4814.666 kb on - strand, within AO356_21470 at 4814.728 kb on + strand, within AO356_21470 at 4814.737 kb on + strand, within AO356_21470 at 4814.804 kb on + strand, within AO356_21470 at 4814.953 kb on + strand, within AO356_21470 at 4814.953 kb on + strand, within AO356_21470 at 4814.954 kb on - strand, within AO356_21470 at 4814.954 kb on - strand, within AO356_21470 at 4814.954 kb on - strand, within AO356_21470 at 4815.222 kb on - strand, within AO356_21470 at 4815.418 kb on + strand, within AO356_21470 at 4816.072 kb on - strand, within AO356_21475 at 4816.138 kb on - strand, within AO356_21475 at 4816.215 kb on + strand, within AO356_21475 at 4816.216 kb on - strand, within AO356_21475 at 4816.216 kb on - strand, within AO356_21475 at 4816.399 kb on + strand, within AO356_21475 at 4816.503 kb on + strand at 4816.503 kb on + strand at 4816.572 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,813,575 + AO356_21465 0.40 -0.1 4,813,576 - AO356_21465 0.40 -2.3 4,813,656 + AO356_21465 0.46 -2.3 4,813,657 - AO356_21465 0.46 -3.2 4,813,657 - AO356_21465 0.46 -2.1 4,814,137 - AO356_21465 0.78 -0.8 4,814,271 + AO356_21465 0.86 -3.0 4,814,272 - AO356_21465 0.87 -1.7 4,814,358 + -2.7 4,814,359 - -3.4 4,814,385 + -3.5 4,814,411 + -1.0 4,814,412 - -1.7 4,814,464 - -3.8 4,814,464 - -2.8 4,814,476 + +0.3 4,814,476 + -1.0 4,814,579 + -4.4 4,814,619 + -2.8 4,814,655 + AO356_21470 0.10 -2.8 4,814,655 + AO356_21470 0.10 -1.3 4,814,655 + AO356_21470 0.10 -3.3 4,814,665 + AO356_21470 0.11 -4.4 4,814,665 + AO356_21470 0.11 -3.4 4,814,665 + AO356_21470 0.11 -1.3 4,814,666 - AO356_21470 0.11 -2.1 4,814,666 - AO356_21470 0.11 -4.1 4,814,666 - AO356_21470 0.11 -2.8 4,814,728 + AO356_21470 0.16 -4.1 4,814,737 + AO356_21470 0.17 -4.0 4,814,804 + AO356_21470 0.23 -3.7 4,814,953 + AO356_21470 0.35 -0.5 4,814,953 + AO356_21470 0.35 -4.3 4,814,954 - AO356_21470 0.35 -4.4 4,814,954 - AO356_21470 0.35 -1.8 4,814,954 - AO356_21470 0.35 -2.5 4,815,222 - AO356_21470 0.57 -3.7 4,815,418 + AO356_21470 0.73 -3.6 4,816,072 - AO356_21475 0.43 +1.5 4,816,138 - AO356_21475 0.52 +0.1 4,816,215 + AO356_21475 0.62 -0.4 4,816,216 - AO356_21475 0.62 -0.2 4,816,216 - AO356_21475 0.62 +0.4 4,816,399 + AO356_21475 0.85 +0.6 4,816,503 + +0.4 4,816,503 + -0.2 4,816,572 - -0.2
Or see this region's nucleotide sequence