Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19260 and AO356_19265 are separated by 144 nucleotides AO356_19265 and AO356_19270 are separated by 160 nucleotides AO356_19270 and AO356_19275 are separated by 19 nucleotides AO356_19275 and AO356_19280 are separated by 173 nucleotides AO356_19280 and AO356_19285 are separated by 17 nucleotides AO356_19285 and AO356_19290 are separated by 92 nucleotides
AO356_19260: AO356_19260 - sodium transporter, at 4,324,529 to 4,325,494
_19260
AO356_19265: AO356_19265 - recombination-associated protein RdgC, at 4,325,639 to 4,326,559
_19265
AO356_19270: AO356_19270 - tRNA-Val, at 4,326,720 to 4,326,795
_19270
AO356_19275: AO356_19275 - tRNA-Asp, at 4,326,815 to 4,326,891
_19275
AO356_19280: AO356_19280 - tRNA-Val, at 4,327,065 to 4,327,140
_19280
AO356_19285: AO356_19285 - tRNA-Asp, at 4,327,158 to 4,327,234
_19285
AO356_19290: AO356_19290 - catalase, at 4,327,327 to 4,328,463
_19290
Position (kb)
4325
4326
4327 Strain fitness (log2 ratio)
-1
0
1 at 4324.774 kb on - strand, within AO356_19260 at 4324.774 kb on - strand, within AO356_19260 at 4324.892 kb on + strand, within AO356_19260 at 4324.892 kb on + strand, within AO356_19260 at 4324.893 kb on - strand, within AO356_19260 at 4325.190 kb on - strand, within AO356_19260 at 4325.190 kb on - strand, within AO356_19260 at 4325.446 kb on - strand at 4325.455 kb on + strand at 4325.455 kb on + strand at 4325.455 kb on + strand at 4325.456 kb on - strand at 4325.456 kb on - strand at 4325.456 kb on - strand at 4325.456 kb on - strand at 4325.456 kb on - strand at 4325.456 kb on - strand at 4325.506 kb on + strand at 4325.506 kb on + strand at 4325.507 kb on - strand at 4325.507 kb on - strand at 4325.509 kb on + strand at 4325.509 kb on + strand at 4325.509 kb on + strand at 4325.510 kb on - strand at 4325.510 kb on - strand at 4325.512 kb on + strand at 4325.512 kb on + strand at 4325.512 kb on + strand at 4325.512 kb on + strand at 4325.513 kb on - strand at 4325.526 kb on - strand at 4325.526 kb on - strand at 4325.526 kb on - strand at 4325.589 kb on + strand at 4325.589 kb on + strand at 4325.589 kb on + strand at 4325.627 kb on + strand at 4325.640 kb on + strand at 4325.640 kb on + strand at 4325.640 kb on + strand at 4325.640 kb on + strand at 4325.641 kb on - strand at 4325.641 kb on - strand at 4325.641 kb on - strand at 4325.876 kb on + strand, within AO356_19265 at 4325.876 kb on + strand, within AO356_19265 at 4325.876 kb on + strand, within AO356_19265 at 4325.876 kb on + strand, within AO356_19265 at 4325.876 kb on + strand, within AO356_19265 at 4325.876 kb on + strand, within AO356_19265 at 4325.876 kb on + strand, within AO356_19265 at 4325.877 kb on - strand, within AO356_19265 at 4326.259 kb on + strand, within AO356_19265 at 4326.260 kb on - strand, within AO356_19265 at 4326.328 kb on + strand, within AO356_19265 at 4326.435 kb on + strand, within AO356_19265 at 4326.435 kb on + strand, within AO356_19265 at 4326.436 kb on - strand, within AO356_19265 at 4326.534 kb on + strand at 4326.535 kb on - strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.538 kb on + strand at 4326.539 kb on - strand at 4326.539 kb on - strand at 4326.539 kb on - strand at 4326.539 kb on - strand at 4326.539 kb on - strand at 4326.539 kb on - strand at 4326.539 kb on - strand at 4326.579 kb on + strand at 4326.580 kb on - strand at 4326.580 kb on - strand at 4326.580 kb on - strand at 4326.594 kb on + strand at 4326.613 kb on + strand at 4326.660 kb on + strand at 4326.693 kb on + strand at 4326.892 kb on + strand at 4327.010 kb on + strand at 4327.010 kb on + strand at 4327.073 kb on - strand, within AO356_19280 at 4327.154 kb on - strand at 4327.166 kb on - strand, within AO356_19285 at 4327.329 kb on - strand at 4327.373 kb on + strand at 4327.373 kb on + strand at 4327.374 kb on - strand at 4327.374 kb on - strand at 4327.374 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,324,774 - AO356_19260 0.25 +0.2 4,324,774 - AO356_19260 0.25 -0.9 4,324,892 + AO356_19260 0.38 -0.2 4,324,892 + AO356_19260 0.38 +0.7 4,324,893 - AO356_19260 0.38 -0.3 4,325,190 - AO356_19260 0.68 +0.3 4,325,190 - AO356_19260 0.68 -0.8 4,325,446 - -0.7 4,325,455 + +0.5 4,325,455 + -0.4 4,325,455 + +0.4 4,325,456 - -0.7 4,325,456 - +0.0 4,325,456 - -1.0 4,325,456 - +0.4 4,325,456 - +0.3 4,325,456 - +0.6 4,325,506 + +0.3 4,325,506 + +0.1 4,325,507 - +0.6 4,325,507 - +0.7 4,325,509 + -0.8 4,325,509 + +0.2 4,325,509 + +1.1 4,325,510 - +0.4 4,325,510 - -0.4 4,325,512 + +0.2 4,325,512 + -0.2 4,325,512 + -0.2 4,325,512 + -0.5 4,325,513 - -0.1 4,325,526 - +0.0 4,325,526 - +1.2 4,325,526 - +0.3 4,325,589 + +1.1 4,325,589 + -0.1 4,325,589 + -0.2 4,325,627 + +0.5 4,325,640 + +0.1 4,325,640 + +0.8 4,325,640 + +0.7 4,325,640 + -0.1 4,325,641 - +0.9 4,325,641 - +0.6 4,325,641 - -0.5 4,325,876 + AO356_19265 0.26 -0.7 4,325,876 + AO356_19265 0.26 -0.4 4,325,876 + AO356_19265 0.26 +0.8 4,325,876 + AO356_19265 0.26 +0.4 4,325,876 + AO356_19265 0.26 -1.1 4,325,876 + AO356_19265 0.26 +1.4 4,325,876 + AO356_19265 0.26 +1.4 4,325,877 - AO356_19265 0.26 -0.3 4,326,259 + AO356_19265 0.67 +0.9 4,326,260 - AO356_19265 0.67 +1.0 4,326,328 + AO356_19265 0.75 +0.7 4,326,435 + AO356_19265 0.86 -0.1 4,326,435 + AO356_19265 0.86 +0.4 4,326,436 - AO356_19265 0.87 +0.9 4,326,534 + +0.9 4,326,535 - +0.9 4,326,538 + +0.1 4,326,538 + +1.1 4,326,538 + -0.0 4,326,538 + +1.4 4,326,538 + +0.6 4,326,538 + +0.5 4,326,538 + +1.0 4,326,538 + +0.7 4,326,538 + +0.8 4,326,538 + +1.2 4,326,538 + +0.8 4,326,539 - -0.1 4,326,539 - +0.4 4,326,539 - -0.3 4,326,539 - +0.9 4,326,539 - +0.9 4,326,539 - +0.5 4,326,539 - -0.1 4,326,579 + +0.7 4,326,580 - -0.3 4,326,580 - +0.9 4,326,580 - -0.3 4,326,594 + +1.2 4,326,613 + +0.0 4,326,660 + +1.3 4,326,693 + -0.3 4,326,892 + -0.8 4,327,010 + +0.4 4,327,010 + +0.1 4,327,073 - AO356_19280 0.11 +1.2 4,327,154 - +0.5 4,327,166 - AO356_19285 0.10 +0.1 4,327,329 - +1.0 4,327,373 + +0.0 4,327,373 + -0.5 4,327,374 - -0.3 4,327,374 - -0.2 4,327,374 - +0.1
Or see this region's nucleotide sequence