Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19210

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_19200 and AO356_19205 are separated by 145 nucleotidesAO356_19205 and AO356_19210 are separated by 276 nucleotidesAO356_19210 and AO356_19215 are separated by 951 nucleotides AO356_19200: AO356_19200 - Long-chain fatty acid transport protein, at 4,309,376 to 4,310,659 _19200 AO356_19205: AO356_19205 - hypothetical protein, at 4,310,805 to 4,311,287 _19205 AO356_19210: AO356_19210 - hypothetical protein, at 4,311,564 to 4,311,788 _19210 AO356_19215: AO356_19215 - hypothetical protein, at 4,312,740 to 4,313,063 _19215 Position (kb) 4311 4312Strain fitness (log2 ratio) -2 -1 0 1at 4310.717 kb on + strandat 4310.718 kb on - strandat 4310.718 kb on - strandat 4310.718 kb on - strandat 4310.719 kb on + strandat 4310.720 kb on - strandat 4310.727 kb on - strandat 4310.727 kb on - strandat 4310.782 kb on + strandat 4310.783 kb on - strandat 4310.783 kb on - strandat 4310.942 kb on + strand, within AO356_19205at 4310.943 kb on - strand, within AO356_19205at 4311.085 kb on + strand, within AO356_19205at 4311.085 kb on + strand, within AO356_19205at 4311.085 kb on + strand, within AO356_19205at 4311.086 kb on - strand, within AO356_19205at 4311.232 kb on + strand, within AO356_19205at 4311.256 kb on + strandat 4311.256 kb on + strandat 4311.257 kb on - strandat 4311.287 kb on + strandat 4311.287 kb on + strandat 4311.288 kb on - strandat 4311.288 kb on - strandat 4311.396 kb on - strandat 4311.396 kb on - strandat 4311.415 kb on - strandat 4311.452 kb on + strandat 4311.453 kb on - strandat 4311.459 kb on + strandat 4311.459 kb on + strandat 4311.459 kb on + strandat 4311.459 kb on + strandat 4311.459 kb on + strandat 4311.460 kb on - strandat 4311.460 kb on - strandat 4311.460 kb on - strandat 4311.460 kb on - strandat 4311.460 kb on - strandat 4311.460 kb on - strandat 4311.460 kb on - strandat 4311.462 kb on - strandat 4311.475 kb on + strandat 4311.510 kb on + strandat 4311.510 kb on + strandat 4311.511 kb on - strandat 4311.625 kb on + strand, within AO356_19210at 4311.625 kb on + strand, within AO356_19210at 4311.626 kb on - strand, within AO356_19210at 4311.637 kb on + strand, within AO356_19210at 4311.783 kb on - strandat 4311.792 kb on - strandat 4311.792 kb on - strandat 4311.792 kb on - strandat 4311.818 kb on + strandat 4311.818 kb on + strandat 4311.835 kb on + strandat 4311.911 kb on + strandat 4311.912 kb on - strandat 4311.912 kb on - strandat 4311.912 kb on - strandat 4311.912 kb on - strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.913 kb on + strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.914 kb on - strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.915 kb on + strandat 4311.916 kb on - strandat 4311.916 kb on - strandat 4311.916 kb on - strandat 4311.916 kb on - strandat 4311.916 kb on - strandat 4311.916 kb on - strandat 4311.916 kb on - strandat 4311.916 kb on - strandat 4311.916 kb on - strandat 4311.939 kb on + strandat 4311.939 kb on + strandat 4311.939 kb on + strandat 4311.940 kb on - strandat 4311.940 kb on - strandat 4311.940 kb on - strandat 4311.943 kb on + strandat 4311.943 kb on + strandat 4311.943 kb on + strandat 4311.943 kb on + strandat 4311.943 kb on + strandat 4311.944 kb on - strandat 4311.944 kb on - strandat 4311.944 kb on - strandat 4311.947 kb on + strandat 4311.947 kb on + strandat 4311.947 kb on + strandat 4311.947 kb on + strandat 4311.948 kb on - strandat 4311.948 kb on - strandat 4311.948 kb on - strandat 4311.948 kb on - strandat 4311.948 kb on - strandat 4311.948 kb on - strandat 4312.033 kb on + strandat 4312.034 kb on - strandat 4312.034 kb on - strandat 4312.196 kb on + strandat 4312.197 kb on - strandat 4312.199 kb on + strandat 4312.200 kb on - strandat 4312.215 kb on - strandat 4312.403 kb on + strandat 4312.403 kb on + strandat 4312.404 kb on - strandat 4312.404 kb on - strandat 4312.404 kb on - strandat 4312.404 kb on - strandat 4312.404 kb on - strandat 4312.404 kb on - strandat 4312.405 kb on + strandat 4312.421 kb on + strandat 4312.422 kb on - strandat 4312.422 kb on - strandat 4312.422 kb on - strandat 4312.422 kb on - strandat 4312.482 kb on - strandat 4312.530 kb on + strandat 4312.651 kb on + strandat 4312.652 kb on - strandat 4312.702 kb on + strandat 4312.702 kb on + strandat 4312.702 kb on + strandat 4312.703 kb on - strandat 4312.703 kb on - strandat 4312.703 kb on - strandat 4312.739 kb on + strandat 4312.739 kb on + strandat 4312.757 kb on - strandat 4312.757 kb on - strandat 4312.769 kb on + strandat 4312.769 kb on + strandat 4312.770 kb on - strandat 4312.770 kb on - strandat 4312.770 kb on - strandat 4312.770 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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4,310,717 + +0.5
4,310,718 - +1.0
4,310,718 - -0.1
4,310,718 - +0.6
4,310,719 + +0.2
4,310,720 - -0.0
4,310,727 - +0.4
4,310,727 - +0.1
4,310,782 + +0.8
4,310,783 - +0.5
4,310,783 - +1.1
4,310,942 + AO356_19205 0.28 +0.6
4,310,943 - AO356_19205 0.29 -0.3
4,311,085 + AO356_19205 0.58 +0.1
4,311,085 + AO356_19205 0.58 +0.1
4,311,085 + AO356_19205 0.58 +0.4
4,311,086 - AO356_19205 0.58 -0.2
4,311,232 + AO356_19205 0.88 -0.3
4,311,256 + -0.6
4,311,256 + -0.0
4,311,257 - +0.2
4,311,287 + -0.3
4,311,287 + -0.2
4,311,288 - +0.2
4,311,288 - +0.3
4,311,396 - +0.3
4,311,396 - +0.8
4,311,415 - -0.8
4,311,452 + -0.6
4,311,453 - +0.6
4,311,459 + +0.1
4,311,459 + -0.1
4,311,459 + -0.1
4,311,459 + -0.0
4,311,459 + -0.3
4,311,460 - +0.8
4,311,460 - -0.2
4,311,460 - -1.9
4,311,460 - -0.5
4,311,460 - -0.1
4,311,460 - +0.5
4,311,460 - +0.6
4,311,462 - -0.2
4,311,475 + -0.9
4,311,510 + +1.1
4,311,510 + -0.1
4,311,511 - +0.4
4,311,625 + AO356_19210 0.27 +0.1
4,311,625 + AO356_19210 0.27 +0.7
4,311,626 - AO356_19210 0.28 +0.7
4,311,637 + AO356_19210 0.32 -0.4
4,311,783 - +0.3
4,311,792 - +0.3
4,311,792 - -1.0
4,311,792 - -0.3
4,311,818 + -0.2
4,311,818 + -0.6
4,311,835 + +0.1
4,311,911 + -0.3
4,311,912 - +0.4
4,311,912 - -0.0
4,311,912 - -0.1
4,311,912 - -0.4
4,311,913 + -0.1
4,311,913 + +0.4
4,311,913 + +1.3
4,311,913 + +0.8
4,311,913 + +0.1
4,311,913 + +0.2
4,311,913 + +0.2
4,311,913 + +0.5
4,311,913 + -0.1
4,311,913 + -0.3
4,311,913 + -0.7
4,311,913 + -0.5
4,311,913 + +0.2
4,311,914 - +0.4
4,311,914 - +0.7
4,311,914 - +0.4
4,311,914 - -0.3
4,311,914 - +0.6
4,311,914 - +0.6
4,311,914 - +0.9
4,311,914 - -0.7
4,311,914 - -0.3
4,311,914 - +0.5
4,311,914 - +0.4
4,311,914 - -1.3
4,311,914 - +0.2
4,311,915 + -0.0
4,311,915 + +0.3
4,311,915 + +0.3
4,311,915 + +0.6
4,311,915 + +0.5
4,311,915 + +0.3
4,311,915 + -0.1
4,311,915 + -0.3
4,311,915 + +0.7
4,311,915 + +0.5
4,311,915 + +0.6
4,311,915 + -0.5
4,311,915 + -0.3
4,311,915 + +0.8
4,311,915 + -0.1
4,311,915 + -1.0
4,311,915 + -0.0
4,311,915 + +0.9
4,311,916 - +0.7
4,311,916 - +1.1
4,311,916 - -0.1
4,311,916 - +0.4
4,311,916 - +0.8
4,311,916 - +0.3
4,311,916 - +0.8
4,311,916 - +0.9
4,311,916 - +0.1
4,311,939 + +0.5
4,311,939 + +0.2
4,311,939 + +0.6
4,311,940 - +0.2
4,311,940 - +0.4
4,311,940 - +0.6
4,311,943 + -1.8
4,311,943 + +0.3
4,311,943 + +0.2
4,311,943 + +0.7
4,311,943 + +0.4
4,311,944 - -0.3
4,311,944 - +0.8
4,311,944 - -0.2
4,311,947 + +0.3
4,311,947 + +0.9
4,311,947 + +0.1
4,311,947 + -0.2
4,311,948 - -0.3
4,311,948 - +0.6
4,311,948 - +0.1
4,311,948 - +0.4
4,311,948 - +1.0
4,311,948 - +1.0
4,312,033 + -0.0
4,312,034 - -1.0
4,312,034 - +0.3
4,312,196 + +0.4
4,312,197 - -0.2
4,312,199 + +0.7
4,312,200 - +0.8
4,312,215 - -0.1
4,312,403 + -0.1
4,312,403 + +0.3
4,312,404 - -0.2
4,312,404 - -0.0
4,312,404 - +0.0
4,312,404 - -0.4
4,312,404 - -0.1
4,312,404 - -0.0
4,312,405 + -0.9
4,312,421 + +0.4
4,312,422 - +0.1
4,312,422 - +0.5
4,312,422 - +0.8
4,312,422 - +0.2
4,312,482 - -0.7
4,312,530 + +0.1
4,312,651 + -0.5
4,312,652 - -0.3
4,312,702 + +0.1
4,312,702 + +0.5
4,312,702 + -0.3
4,312,703 - +0.8
4,312,703 - +0.6
4,312,703 - -0.3
4,312,739 + +0.6
4,312,739 + -0.5
4,312,757 - +0.7
4,312,757 - +0.6
4,312,769 + -0.1
4,312,769 + -0.1
4,312,770 - +1.0
4,312,770 - +0.3
4,312,770 - -0.2
4,312,770 - +0.6

Or see this region's nucleotide sequence