Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07480 and AO356_07485 are separated by 105 nucleotides AO356_07485 and AO356_07490 are separated by 255 nucleotides
AO356_07480: AO356_07480 - carbamoyl phosphate synthase large subunit, at 1,653,574 to 1,656,795
_07480
AO356_07485: AO356_07485 - carbamoyl phosphate synthase small subunit, at 1,656,901 to 1,658,037
_07485
AO356_07490: AO356_07490 - 4-hydroxy-tetrahydrodipicolinate reductase, at 1,658,293 to 1,659,099
_07490
Position (kb)
1656
1657
1658
1659 Strain fitness (log2 ratio)
-2
-1
0
1 at 1656.248 kb on + strand, within AO356_07480 at 1656.603 kb on - strand at 1656.776 kb on - strand at 1656.783 kb on + strand at 1656.830 kb on - strand at 1657.443 kb on - strand, within AO356_07485 at 1657.464 kb on - strand, within AO356_07485 at 1657.942 kb on - strand at 1658.021 kb on - strand at 1658.055 kb on - strand at 1658.083 kb on - strand at 1658.083 kb on - strand at 1658.133 kb on - strand at 1658.168 kb on - strand at 1658.250 kb on + strand at 1658.250 kb on + strand at 1658.251 kb on - strand at 1658.265 kb on + strand at 1658.265 kb on + strand at 1658.265 kb on + strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand at 1658.266 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,656,248 + AO356_07480 0.83 -0.4 1,656,603 - +0.3 1,656,776 - -1.4 1,656,783 + -1.1 1,656,830 - -0.2 1,657,443 - AO356_07485 0.48 -1.1 1,657,464 - AO356_07485 0.50 -2.2 1,657,942 - -0.7 1,658,021 - -0.1 1,658,055 - -0.4 1,658,083 - -1.2 1,658,083 - -1.4 1,658,133 - -1.0 1,658,168 - -0.7 1,658,250 + -1.0 1,658,250 + -1.6 1,658,251 - +0.6 1,658,265 + -0.7 1,658,265 + -1.1 1,658,265 + -1.4 1,658,266 - -0.9 1,658,266 - +0.4 1,658,266 - +0.2 1,658,266 - -0.2 1,658,266 - -0.4 1,658,266 - -0.2 1,658,266 - +0.3 1,658,266 - +0.6 1,658,266 - -0.0 1,658,266 - +0.8 1,658,266 - -0.2
Or see this region's nucleotide sequence