Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07465 and AO356_07470 are separated by 10 nucleotides AO356_07470 and AO356_07475 are separated by 28 nucleotides AO356_07475 and AO356_07480 are separated by 2 nucleotides AO356_07480 and AO356_07485 are separated by 105 nucleotides
AO356_07465: AO356_07465 - RNA-binding protein, at 1,652,343 to 1,652,651
_07465
AO356_07470: AO356_07470 - MFS transporter, at 1,652,662 to 1,653,066
_07470
AO356_07475: AO356_07475 - transcription elongation factor GreA, at 1,653,095 to 1,653,571
_07475
AO356_07480: AO356_07480 - carbamoyl phosphate synthase large subunit, at 1,653,574 to 1,656,795
_07480
AO356_07485: AO356_07485 - carbamoyl phosphate synthase small subunit, at 1,656,901 to 1,658,037
_07485
Position (kb)
1653
1654
1655
1656
1657 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1652.748 kb on - strand, within AO356_07470 at 1652.748 kb on - strand, within AO356_07470 at 1652.756 kb on - strand, within AO356_07470 at 1652.817 kb on - strand, within AO356_07470 at 1652.817 kb on - strand, within AO356_07470 at 1652.817 kb on - strand, within AO356_07470 at 1652.817 kb on - strand, within AO356_07470 at 1652.817 kb on - strand, within AO356_07470 at 1652.858 kb on - strand, within AO356_07470 at 1653.259 kb on - strand, within AO356_07475 at 1653.326 kb on - strand, within AO356_07475 at 1653.596 kb on - strand at 1653.596 kb on - strand at 1653.596 kb on - strand at 1653.596 kb on - strand at 1653.596 kb on - strand at 1653.596 kb on - strand at 1653.596 kb on - strand at 1653.596 kb on - strand at 1653.596 kb on - strand at 1653.614 kb on - strand at 1653.614 kb on - strand at 1653.614 kb on - strand at 1653.614 kb on - strand at 1653.684 kb on - strand at 1654.287 kb on - strand, within AO356_07480 at 1654.287 kb on - strand, within AO356_07480 at 1654.403 kb on + strand, within AO356_07480 at 1654.647 kb on - strand, within AO356_07480 at 1655.157 kb on - strand, within AO356_07480 at 1655.166 kb on - strand, within AO356_07480 at 1656.248 kb on + strand, within AO356_07480 at 1656.603 kb on - strand at 1656.776 kb on - strand at 1656.783 kb on + strand at 1656.830 kb on - strand at 1657.443 kb on - strand, within AO356_07485 at 1657.464 kb on - strand, within AO356_07485
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,652,748 - AO356_07470 0.21 +0.5 1,652,748 - AO356_07470 0.21 +0.0 1,652,756 - AO356_07470 0.23 +0.8 1,652,817 - AO356_07470 0.38 -0.2 1,652,817 - AO356_07470 0.38 +0.4 1,652,817 - AO356_07470 0.38 +0.1 1,652,817 - AO356_07470 0.38 -0.4 1,652,817 - AO356_07470 0.38 -1.7 1,652,858 - AO356_07470 0.48 -0.5 1,653,259 - AO356_07475 0.34 +0.0 1,653,326 - AO356_07475 0.48 -1.1 1,653,596 - +0.8 1,653,596 - -0.2 1,653,596 - +1.2 1,653,596 - -0.5 1,653,596 - -0.1 1,653,596 - -0.2 1,653,596 - +1.3 1,653,596 - +0.3 1,653,596 - -0.4 1,653,614 - -2.7 1,653,614 - -3.5 1,653,614 - -1.4 1,653,614 - -0.5 1,653,684 - -1.8 1,654,287 - AO356_07480 0.22 -1.2 1,654,287 - AO356_07480 0.22 -1.1 1,654,403 + AO356_07480 0.26 -0.9 1,654,647 - AO356_07480 0.33 -1.2 1,655,157 - AO356_07480 0.49 -1.7 1,655,166 - AO356_07480 0.49 -0.7 1,656,248 + AO356_07480 0.83 -0.4 1,656,603 - +0.3 1,656,776 - -1.4 1,656,783 + -1.1 1,656,830 - -0.2 1,657,443 - AO356_07485 0.48 -1.1 1,657,464 - AO356_07485 0.50 -2.2
Or see this region's nucleotide sequence