Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07420 and AO356_07425 are separated by 140 nucleotides AO356_07425 and AO356_07430 are separated by 97 nucleotides AO356_07430 and AO356_07435 are separated by 21 nucleotides AO356_07435 and AO356_07440 are separated by 4 nucleotides AO356_07440 and AO356_07445 are separated by 66 nucleotides
AO356_07420: AO356_07420 - ribosome maturation protein RimP, at 1,645,177 to 1,645,635
_07420
AO356_07425: AO356_07425 - tRNA-Met, at 1,645,776 to 1,645,852
_07425
AO356_07430: AO356_07430 - tRNA-Leu, at 1,645,950 to 1,646,035
_07430
AO356_07435: AO356_07435 - preprotein translocase subunit SecG, at 1,646,057 to 1,646,440
_07435
AO356_07440: AO356_07440 - triosephosphate isomerase, at 1,646,445 to 1,647,200
_07440
AO356_07445: AO356_07445 - phosphoglucosamine mutase, at 1,647,267 to 1,648,604
_07445
Position (kb)
1646
1647
1648 Strain fitness (log2 ratio)
-2
-1
0
1 at 1645.728 kb on - strand at 1645.730 kb on - strand at 1645.730 kb on - strand at 1645.743 kb on - strand at 1645.872 kb on - strand at 1645.874 kb on - strand at 1645.900 kb on + strand at 1645.900 kb on + strand at 1645.901 kb on - strand at 1645.901 kb on - strand at 1645.901 kb on - strand at 1645.901 kb on - strand at 1645.913 kb on + strand at 1645.947 kb on - strand at 1645.947 kb on - strand at 1645.947 kb on - strand at 1646.039 kb on - strand at 1646.059 kb on - strand at 1646.059 kb on - strand at 1646.059 kb on - strand at 1646.059 kb on - strand at 1646.153 kb on - strand, within AO356_07435 at 1646.187 kb on - strand, within AO356_07435 at 1647.206 kb on - strand at 1647.206 kb on - strand at 1647.206 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,645,728 - +0.3 1,645,730 - +0.1 1,645,730 - +0.3 1,645,743 - +0.3 1,645,872 - -0.8 1,645,874 - +0.9 1,645,900 + -2.7 1,645,900 + -0.9 1,645,901 - +0.5 1,645,901 - +0.5 1,645,901 - -0.4 1,645,901 - -0.6 1,645,913 + -2.1 1,645,947 - -0.3 1,645,947 - +0.1 1,645,947 - +1.3 1,646,039 - -0.4 1,646,059 - -0.2 1,646,059 - -1.1 1,646,059 - -0.2 1,646,059 - +1.4 1,646,153 - AO356_07435 0.25 +0.1 1,646,187 - AO356_07435 0.34 -1.5 1,647,206 - -2.2 1,647,206 - -2.2 1,647,206 - +0.1
Or see this region's nucleotide sequence