Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07140 and AO356_07145 are separated by 10 nucleotides AO356_07145 and AO356_07150 are separated by 176 nucleotides AO356_07150 and AO356_07155 are separated by 49 nucleotides
AO356_07140: AO356_07140 - glutamyl-tRNA amidotransferase, at 1,574,037 to 1,575,488
_07140
AO356_07145: AO356_07145 - glutamyl-tRNA amidotransferase, at 1,575,499 to 1,576,944
_07145
AO356_07150: AO356_07150 - hypothetical protein, at 1,577,121 to 1,577,498
_07150
AO356_07155: AO356_07155 - conjugal transfer protein TraR, at 1,577,548 to 1,578,609
_07155
Position (kb)
1575
1576
1577 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1577.037 kb on + strand at 1577.037 kb on + strand at 1577.037 kb on + strand at 1577.037 kb on + strand at 1577.038 kb on - strand at 1577.053 kb on + strand at 1577.104 kb on + strand at 1577.104 kb on + strand at 1577.229 kb on + strand, within AO356_07150 at 1577.229 kb on + strand, within AO356_07150 at 1577.229 kb on + strand, within AO356_07150 at 1577.229 kb on + strand, within AO356_07150 at 1577.230 kb on - strand, within AO356_07150 at 1577.230 kb on - strand, within AO356_07150 at 1577.230 kb on - strand, within AO356_07150 at 1577.230 kb on - strand, within AO356_07150 at 1577.232 kb on + strand, within AO356_07150 at 1577.232 kb on + strand, within AO356_07150 at 1577.233 kb on - strand, within AO356_07150 at 1577.233 kb on - strand, within AO356_07150 at 1577.233 kb on - strand, within AO356_07150 at 1577.233 kb on - strand, within AO356_07150 at 1577.357 kb on + strand, within AO356_07150 at 1577.357 kb on + strand, within AO356_07150 at 1577.358 kb on - strand, within AO356_07150 at 1577.358 kb on - strand, within AO356_07150 at 1577.358 kb on - strand, within AO356_07150 at 1577.358 kb on - strand, within AO356_07150 at 1577.394 kb on + strand, within AO356_07150 at 1577.499 kb on + strand at 1577.500 kb on - strand at 1577.639 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,577,037 + -0.1 1,577,037 + +0.4 1,577,037 + +0.6 1,577,037 + +0.5 1,577,038 - +0.5 1,577,053 + +0.2 1,577,104 + +0.2 1,577,104 + +0.5 1,577,229 + AO356_07150 0.29 +0.4 1,577,229 + AO356_07150 0.29 +0.3 1,577,229 + AO356_07150 0.29 +0.6 1,577,229 + AO356_07150 0.29 +0.1 1,577,230 - AO356_07150 0.29 +0.2 1,577,230 - AO356_07150 0.29 +0.6 1,577,230 - AO356_07150 0.29 -0.3 1,577,230 - AO356_07150 0.29 -0.5 1,577,232 + AO356_07150 0.29 -0.1 1,577,232 + AO356_07150 0.29 +0.3 1,577,233 - AO356_07150 0.30 +0.9 1,577,233 - AO356_07150 0.30 -1.0 1,577,233 - AO356_07150 0.30 -1.0 1,577,233 - AO356_07150 0.30 +0.3 1,577,357 + AO356_07150 0.62 +0.9 1,577,357 + AO356_07150 0.62 +1.6 1,577,358 - AO356_07150 0.63 -2.9 1,577,358 - AO356_07150 0.63 -0.8 1,577,358 - AO356_07150 0.63 +0.5 1,577,358 - AO356_07150 0.63 +0.3 1,577,394 + AO356_07150 0.72 +0.7 1,577,499 + -0.3 1,577,500 - -0.2 1,577,639 + +0.5
Or see this region's nucleotide sequence