Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05940

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_05930 and AO356_05935 overlap by 4 nucleotidesAO356_05935 and AO356_05940 are separated by 171 nucleotidesAO356_05940 and AO356_05945 are separated by 246 nucleotides AO356_05930: AO356_05930 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,312,791 to 1,313,498 _05930 AO356_05935: AO356_05935 - cell division protein FtsB, at 1,313,495 to 1,313,773 _05935 AO356_05940: AO356_05940 - enolase, at 1,313,945 to 1,315,234 _05940 AO356_05945: AO356_05945 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 1,315,481 to 1,316,326 _05945 Position (kb) 1313 1314 1315 1316Strain fitness (log2 ratio) -2 -1 0 1at 1313.493 kb on - strandat 1313.867 kb on - strandat 1313.880 kb on - strandat 1313.940 kb on - strandat 1313.940 kb on - strandat 1313.974 kb on - strandat 1315.460 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,313,493 - -0.0
1,313,867 - +0.1
1,313,880 - -1.7
1,313,940 - -0.9
1,313,940 - +0.5
1,313,974 - -2.3
1,315,460 - +0.5

Or see this region's nucleotide sequence