Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05145 and AO356_05150 are separated by 113 nucleotides AO356_05150 and AO356_05155 are separated by 17 nucleotides AO356_05155 and AO356_05160 overlap by 14 nucleotides
AO356_05145: AO356_05145 - class V aminotransferase, at 1,154,291 to 1,155,478
_05145
AO356_05150: AO356_05150 - keto-deoxy-phosphogluconate aldolase, at 1,155,592 to 1,156,257
_05150
AO356_05155: AO356_05155 - 6-phosphogluconolactonase, at 1,156,275 to 1,156,988
_05155
AO356_05160: AO356_05160 - glucose-6-phosphate dehydrogenase, at 1,156,975 to 1,158,444
_05160
Position (kb)
1156
1157 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1155.275 kb on + strand, within AO356_05145 at 1155.276 kb on - strand, within AO356_05145 at 1155.276 kb on - strand, within AO356_05145 at 1155.276 kb on - strand, within AO356_05145 at 1155.418 kb on + strand at 1155.418 kb on + strand at 1155.418 kb on + strand at 1155.418 kb on + strand at 1155.419 kb on - strand at 1155.419 kb on - strand at 1155.473 kb on - strand at 1155.476 kb on + strand at 1155.476 kb on + strand at 1155.476 kb on + strand at 1155.476 kb on + strand at 1155.477 kb on - strand at 1155.477 kb on - strand at 1155.477 kb on - strand at 1155.477 kb on - strand at 1155.477 kb on - strand at 1155.477 kb on - strand at 1155.477 kb on - strand at 1155.477 kb on - strand at 1155.509 kb on + strand at 1155.510 kb on - strand at 1155.555 kb on - strand at 1155.562 kb on + strand at 1155.563 kb on - strand at 1155.563 kb on - strand at 1155.563 kb on - strand at 1155.585 kb on - strand at 1156.289 kb on - strand at 1156.981 kb on - strand at 1156.989 kb on - strand at 1157.190 kb on - strand, within AO356_05160 at 1157.217 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.379 kb on - strand, within AO356_05160 at 1157.589 kb on - strand, within AO356_05160 at 1157.589 kb on - strand, within AO356_05160 at 1157.651 kb on - strand, within AO356_05160 at 1157.778 kb on - strand, within AO356_05160 at 1157.838 kb on - strand, within AO356_05160 at 1157.838 kb on - strand, within AO356_05160 at 1157.838 kb on - strand, within AO356_05160 at 1157.838 kb on - strand, within AO356_05160 at 1157.919 kb on - strand, within AO356_05160 at 1157.938 kb on - strand, within AO356_05160 at 1157.938 kb on - strand, within AO356_05160
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,155,275 + AO356_05145 0.83 +0.6 1,155,276 - AO356_05145 0.83 -0.2 1,155,276 - AO356_05145 0.83 +0.8 1,155,276 - AO356_05145 0.83 +0.4 1,155,418 + +1.3 1,155,418 + -0.1 1,155,418 + +0.2 1,155,418 + +0.7 1,155,419 - -0.4 1,155,419 - -0.2 1,155,473 - -0.4 1,155,476 + +0.9 1,155,476 + +0.9 1,155,476 + +0.1 1,155,476 + +2.1 1,155,477 - +0.7 1,155,477 - +0.5 1,155,477 - +0.1 1,155,477 - +0.5 1,155,477 - +0.5 1,155,477 - +0.2 1,155,477 - +0.1 1,155,477 - +0.2 1,155,509 + +0.0 1,155,510 - -0.1 1,155,555 - +0.5 1,155,562 + +1.1 1,155,563 - -0.9 1,155,563 - +0.1 1,155,563 - -0.2 1,155,585 - -0.1 1,156,289 - -1.2 1,156,981 - +0.2 1,156,989 - +0.1 1,157,190 - AO356_05160 0.15 +0.4 1,157,217 - AO356_05160 0.16 -0.4 1,157,379 - AO356_05160 0.27 -0.9 1,157,379 - AO356_05160 0.27 -1.6 1,157,379 - AO356_05160 0.27 +0.3 1,157,379 - AO356_05160 0.27 -0.4 1,157,379 - AO356_05160 0.27 +0.1 1,157,589 - AO356_05160 0.42 -1.2 1,157,589 - AO356_05160 0.42 -0.1 1,157,651 - AO356_05160 0.46 +0.3 1,157,778 - AO356_05160 0.55 -0.2 1,157,838 - AO356_05160 0.59 -0.3 1,157,838 - AO356_05160 0.59 -0.2 1,157,838 - AO356_05160 0.59 +0.0 1,157,838 - AO356_05160 0.59 -0.7 1,157,919 - AO356_05160 0.64 -1.8 1,157,938 - AO356_05160 0.66 -0.4 1,157,938 - AO356_05160 0.66 -0.6
Or see this region's nucleotide sequence