Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05150

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_05145 and AO356_05150 are separated by 113 nucleotidesAO356_05150 and AO356_05155 are separated by 17 nucleotidesAO356_05155 and AO356_05160 overlap by 14 nucleotides AO356_05145: AO356_05145 - class V aminotransferase, at 1,154,291 to 1,155,478 _05145 AO356_05150: AO356_05150 - keto-deoxy-phosphogluconate aldolase, at 1,155,592 to 1,156,257 _05150 AO356_05155: AO356_05155 - 6-phosphogluconolactonase, at 1,156,275 to 1,156,988 _05155 AO356_05160: AO356_05160 - glucose-6-phosphate dehydrogenase, at 1,156,975 to 1,158,444 _05160 Position (kb) 1155 1156 1157Strain fitness (log2 ratio) -1 0 1 2at 1154.606 kb on + strand, within AO356_05145at 1154.606 kb on + strand, within AO356_05145at 1154.607 kb on - strand, within AO356_05145at 1154.607 kb on - strand, within AO356_05145at 1154.654 kb on + strand, within AO356_05145at 1154.654 kb on + strand, within AO356_05145at 1154.655 kb on - strand, within AO356_05145at 1154.763 kb on - strand, within AO356_05145at 1154.813 kb on + strand, within AO356_05145at 1154.813 kb on + strand, within AO356_05145at 1154.814 kb on - strand, within AO356_05145at 1154.814 kb on - strand, within AO356_05145at 1154.814 kb on - strand, within AO356_05145at 1155.011 kb on + strand, within AO356_05145at 1155.011 kb on + strand, within AO356_05145at 1155.011 kb on + strand, within AO356_05145at 1155.012 kb on - strand, within AO356_05145at 1155.065 kb on + strand, within AO356_05145at 1155.065 kb on + strand, within AO356_05145at 1155.065 kb on + strand, within AO356_05145at 1155.066 kb on - strand, within AO356_05145at 1155.066 kb on - strand, within AO356_05145at 1155.197 kb on + strand, within AO356_05145at 1155.197 kb on + strand, within AO356_05145at 1155.198 kb on - strand, within AO356_05145at 1155.198 kb on - strand, within AO356_05145at 1155.198 kb on - strand, within AO356_05145at 1155.275 kb on + strand, within AO356_05145at 1155.276 kb on - strand, within AO356_05145at 1155.276 kb on - strand, within AO356_05145at 1155.276 kb on - strand, within AO356_05145at 1155.418 kb on + strandat 1155.418 kb on + strandat 1155.418 kb on + strandat 1155.418 kb on + strandat 1155.419 kb on - strandat 1155.419 kb on - strandat 1155.473 kb on - strandat 1155.476 kb on + strandat 1155.476 kb on + strandat 1155.476 kb on + strandat 1155.476 kb on + strandat 1155.477 kb on - strandat 1155.477 kb on - strandat 1155.477 kb on - strandat 1155.477 kb on - strandat 1155.477 kb on - strandat 1155.477 kb on - strandat 1155.477 kb on - strandat 1155.477 kb on - strandat 1155.509 kb on + strandat 1155.510 kb on - strandat 1155.555 kb on - strandat 1155.562 kb on + strandat 1155.563 kb on - strandat 1155.563 kb on - strandat 1155.563 kb on - strandat 1155.585 kb on - strandat 1156.289 kb on - strandat 1156.981 kb on - strandat 1156.989 kb on - strandat 1157.190 kb on - strand, within AO356_05160at 1157.217 kb on - strand, within AO356_05160

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,154,606 + AO356_05145 0.27 +0.0
1,154,606 + AO356_05145 0.27 -0.2
1,154,607 - AO356_05145 0.27 +0.6
1,154,607 - AO356_05145 0.27 +0.8
1,154,654 + AO356_05145 0.31 -1.2
1,154,654 + AO356_05145 0.31 -0.0
1,154,655 - AO356_05145 0.31 -0.8
1,154,763 - AO356_05145 0.40 +1.4
1,154,813 + AO356_05145 0.44 +0.5
1,154,813 + AO356_05145 0.44 +0.4
1,154,814 - AO356_05145 0.44 -0.5
1,154,814 - AO356_05145 0.44 -0.4
1,154,814 - AO356_05145 0.44 +0.7
1,155,011 + AO356_05145 0.61 +0.5
1,155,011 + AO356_05145 0.61 +0.6
1,155,011 + AO356_05145 0.61 +0.2
1,155,012 - AO356_05145 0.61 +0.3
1,155,065 + AO356_05145 0.65 +0.2
1,155,065 + AO356_05145 0.65 -0.0
1,155,065 + AO356_05145 0.65 -0.5
1,155,066 - AO356_05145 0.65 -0.0
1,155,066 - AO356_05145 0.65 +0.2
1,155,197 + AO356_05145 0.76 +1.1
1,155,197 + AO356_05145 0.76 -0.1
1,155,198 - AO356_05145 0.76 +0.4
1,155,198 - AO356_05145 0.76 +0.3
1,155,198 - AO356_05145 0.76 +0.6
1,155,275 + AO356_05145 0.83 +0.6
1,155,276 - AO356_05145 0.83 -0.2
1,155,276 - AO356_05145 0.83 +0.8
1,155,276 - AO356_05145 0.83 +0.4
1,155,418 + +1.3
1,155,418 + -0.1
1,155,418 + +0.2
1,155,418 + +0.7
1,155,419 - -0.4
1,155,419 - -0.2
1,155,473 - -0.4
1,155,476 + +0.9
1,155,476 + +0.9
1,155,476 + +0.1
1,155,476 + +2.1
1,155,477 - +0.7
1,155,477 - +0.5
1,155,477 - +0.1
1,155,477 - +0.5
1,155,477 - +0.5
1,155,477 - +0.2
1,155,477 - +0.1
1,155,477 - +0.2
1,155,509 + +0.0
1,155,510 - -0.1
1,155,555 - +0.5
1,155,562 + +1.1
1,155,563 - -0.9
1,155,563 - +0.1
1,155,563 - -0.2
1,155,585 - -0.1
1,156,289 - -1.2
1,156,981 - +0.2
1,156,989 - +0.1
1,157,190 - AO356_05160 0.15 +0.4
1,157,217 - AO356_05160 0.16 -0.4

Or see this region's nucleotide sequence