Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04980 and AO356_04985 are separated by 238 nucleotides AO356_04985 and AO356_04990 are separated by 106 nucleotides
AO356_04980: AO356_04980 - calcium channel protein, at 1,121,546 to 1,122,388
_04980
AO356_04985: AO356_04985 - ATPase, at 1,122,627 to 1,123,502
_04985
AO356_04990: AO356_04990 - 3-beta hydroxysteroid dehydrogenase, at 1,123,609 to 1,124,601
_04990
Position (kb)
1122
1123
1124 Strain fitness (log2 ratio)
-2
-1
0
1 at 1121.652 kb on + strand, within AO356_04980 at 1121.652 kb on + strand, within AO356_04980 at 1121.652 kb on + strand, within AO356_04980 at 1121.652 kb on + strand, within AO356_04980 at 1121.653 kb on - strand, within AO356_04980 at 1121.653 kb on - strand, within AO356_04980 at 1121.653 kb on - strand, within AO356_04980 at 1121.775 kb on + strand, within AO356_04980 at 1121.775 kb on + strand, within AO356_04980 at 1121.775 kb on + strand, within AO356_04980 at 1121.775 kb on + strand, within AO356_04980 at 1121.776 kb on - strand, within AO356_04980 at 1121.776 kb on - strand, within AO356_04980 at 1121.776 kb on - strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.808 kb on + strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.809 kb on - strand, within AO356_04980 at 1121.941 kb on - strand, within AO356_04980 at 1121.941 kb on - strand, within AO356_04980 at 1121.983 kb on - strand, within AO356_04980 at 1122.031 kb on - strand, within AO356_04980 at 1122.192 kb on + strand, within AO356_04980 at 1122.192 kb on + strand, within AO356_04980 at 1122.192 kb on + strand, within AO356_04980 at 1122.192 kb on + strand, within AO356_04980 at 1122.193 kb on - strand, within AO356_04980 at 1122.193 kb on - strand, within AO356_04980 at 1122.262 kb on - strand, within AO356_04980 at 1122.264 kb on + strand, within AO356_04980 at 1122.264 kb on + strand, within AO356_04980 at 1122.264 kb on + strand, within AO356_04980 at 1122.265 kb on - strand, within AO356_04980 at 1122.426 kb on + strand at 1122.427 kb on - strand at 1122.427 kb on - strand at 1122.427 kb on - strand at 1122.427 kb on - strand at 1122.451 kb on + strand at 1122.451 kb on + strand at 1122.451 kb on + strand at 1122.452 kb on - strand at 1122.452 kb on - strand at 1122.491 kb on - strand at 1122.496 kb on + strand at 1122.496 kb on + strand at 1122.497 kb on - strand at 1122.628 kb on + strand at 1122.628 kb on + strand at 1122.628 kb on + strand at 1122.629 kb on - strand at 1122.629 kb on - strand at 1122.629 kb on - strand at 1122.693 kb on - strand at 1123.044 kb on + strand, within AO356_04985 at 1123.044 kb on + strand, within AO356_04985 at 1123.044 kb on + strand, within AO356_04985 at 1123.044 kb on + strand, within AO356_04985 at 1123.045 kb on - strand, within AO356_04985 at 1123.051 kb on + strand, within AO356_04985 at 1123.051 kb on + strand, within AO356_04985 at 1123.051 kb on + strand, within AO356_04985 at 1123.051 kb on + strand, within AO356_04985 at 1123.051 kb on + strand, within AO356_04985 at 1123.052 kb on - strand, within AO356_04985 at 1123.052 kb on - strand, within AO356_04985 at 1123.052 kb on - strand, within AO356_04985 at 1123.461 kb on + strand at 1123.461 kb on + strand at 1123.461 kb on + strand at 1123.462 kb on - strand at 1123.462 kb on - strand at 1123.462 kb on - strand at 1123.545 kb on + strand at 1123.545 kb on + strand at 1123.545 kb on + strand at 1123.545 kb on + strand at 1123.546 kb on - strand at 1123.546 kb on - strand at 1123.546 kb on - strand at 1123.546 kb on - strand at 1123.546 kb on - strand at 1123.547 kb on + strand at 1123.547 kb on + strand at 1123.547 kb on + strand at 1123.547 kb on + strand at 1123.683 kb on - strand at 1123.691 kb on + strand at 1123.691 kb on + strand at 1123.692 kb on - strand at 1123.692 kb on - strand at 1123.692 kb on - strand at 1123.710 kb on + strand, within AO356_04990 at 1123.820 kb on + strand, within AO356_04990 at 1123.821 kb on - strand, within AO356_04990 at 1123.821 kb on - strand, within AO356_04990 at 1123.832 kb on + strand, within AO356_04990 at 1123.833 kb on - strand, within AO356_04990 at 1123.880 kb on + strand, within AO356_04990 at 1123.880 kb on + strand, within AO356_04990 at 1123.880 kb on + strand, within AO356_04990 at 1123.880 kb on + strand, within AO356_04990 at 1123.880 kb on + strand, within AO356_04990 at 1123.880 kb on + strand, within AO356_04990 at 1123.880 kb on + strand, within AO356_04990 at 1123.880 kb on + strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.881 kb on - strand, within AO356_04990 at 1123.928 kb on + strand, within AO356_04990 at 1123.929 kb on - strand, within AO356_04990 at 1124.174 kb on + strand, within AO356_04990 at 1124.174 kb on + strand, within AO356_04990 at 1124.174 kb on + strand, within AO356_04990 at 1124.174 kb on + strand, within AO356_04990 at 1124.175 kb on - strand, within AO356_04990 at 1124.175 kb on - strand, within AO356_04990 at 1124.175 kb on - strand, within AO356_04990 at 1124.175 kb on - strand, within AO356_04990 at 1124.255 kb on + strand, within AO356_04990 at 1124.256 kb on - strand, within AO356_04990 at 1124.360 kb on + strand, within AO356_04990
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,121,652 + AO356_04980 0.13 +0.2 1,121,652 + AO356_04980 0.13 +0.9 1,121,652 + AO356_04980 0.13 +0.4 1,121,652 + AO356_04980 0.13 +0.2 1,121,653 - AO356_04980 0.13 +0.2 1,121,653 - AO356_04980 0.13 -0.9 1,121,653 - AO356_04980 0.13 +0.0 1,121,775 + AO356_04980 0.27 +0.1 1,121,775 + AO356_04980 0.27 +0.0 1,121,775 + AO356_04980 0.27 -0.6 1,121,775 + AO356_04980 0.27 +0.6 1,121,776 - AO356_04980 0.27 +0.3 1,121,776 - AO356_04980 0.27 +0.6 1,121,776 - AO356_04980 0.27 +0.7 1,121,808 + AO356_04980 0.31 +1.0 1,121,808 + AO356_04980 0.31 +0.4 1,121,808 + AO356_04980 0.31 +1.0 1,121,808 + AO356_04980 0.31 +0.8 1,121,808 + AO356_04980 0.31 -0.4 1,121,808 + AO356_04980 0.31 -0.1 1,121,808 + AO356_04980 0.31 +0.1 1,121,808 + AO356_04980 0.31 +0.7 1,121,808 + AO356_04980 0.31 -1.3 1,121,808 + AO356_04980 0.31 +0.2 1,121,808 + AO356_04980 0.31 -1.6 1,121,808 + AO356_04980 0.31 -0.0 1,121,808 + AO356_04980 0.31 +0.3 1,121,808 + AO356_04980 0.31 +0.7 1,121,809 - AO356_04980 0.31 +0.1 1,121,809 - AO356_04980 0.31 +0.6 1,121,809 - AO356_04980 0.31 +1.3 1,121,809 - AO356_04980 0.31 -0.2 1,121,809 - AO356_04980 0.31 +0.7 1,121,809 - AO356_04980 0.31 +0.4 1,121,809 - AO356_04980 0.31 +0.8 1,121,809 - AO356_04980 0.31 +0.4 1,121,809 - AO356_04980 0.31 +0.2 1,121,809 - AO356_04980 0.31 +0.2 1,121,809 - AO356_04980 0.31 +0.5 1,121,809 - AO356_04980 0.31 -0.0 1,121,941 - AO356_04980 0.47 +0.9 1,121,941 - AO356_04980 0.47 -0.3 1,121,983 - AO356_04980 0.52 +0.1 1,122,031 - AO356_04980 0.58 +0.6 1,122,192 + AO356_04980 0.77 +0.4 1,122,192 + AO356_04980 0.77 +0.3 1,122,192 + AO356_04980 0.77 +0.1 1,122,192 + AO356_04980 0.77 -0.1 1,122,193 - AO356_04980 0.77 +0.1 1,122,193 - AO356_04980 0.77 +0.5 1,122,262 - AO356_04980 0.85 +0.3 1,122,264 + AO356_04980 0.85 +0.9 1,122,264 + AO356_04980 0.85 +0.2 1,122,264 + AO356_04980 0.85 -0.7 1,122,265 - AO356_04980 0.85 -1.0 1,122,426 + +0.8 1,122,427 - +0.7 1,122,427 - +0.1 1,122,427 - +0.4 1,122,427 - +0.2 1,122,451 + +0.2 1,122,451 + -0.7 1,122,451 + -0.3 1,122,452 - +0.3 1,122,452 - +0.8 1,122,491 - -0.7 1,122,496 + +0.4 1,122,496 + -0.7 1,122,497 - +1.1 1,122,628 + +1.0 1,122,628 + +1.2 1,122,628 + +0.3 1,122,629 - -0.4 1,122,629 - +0.2 1,122,629 - +0.5 1,122,693 - -0.6 1,123,044 + AO356_04985 0.48 -2.2 1,123,044 + AO356_04985 0.48 -0.7 1,123,044 + AO356_04985 0.48 -0.0 1,123,044 + AO356_04985 0.48 +0.3 1,123,045 - AO356_04985 0.48 -0.7 1,123,051 + AO356_04985 0.48 -0.0 1,123,051 + AO356_04985 0.48 +0.3 1,123,051 + AO356_04985 0.48 +1.7 1,123,051 + AO356_04985 0.48 -0.3 1,123,051 + AO356_04985 0.48 -0.5 1,123,052 - AO356_04985 0.49 -0.0 1,123,052 - AO356_04985 0.49 -0.9 1,123,052 - AO356_04985 0.49 -0.3 1,123,461 + +0.2 1,123,461 + -0.0 1,123,461 + -0.2 1,123,462 - +1.3 1,123,462 - -0.7 1,123,462 - +0.5 1,123,545 + -0.9 1,123,545 + -0.8 1,123,545 + +0.6 1,123,545 + -0.8 1,123,546 - +0.2 1,123,546 - -0.0 1,123,546 - +0.0 1,123,546 - +0.4 1,123,546 - +0.6 1,123,547 + -0.0 1,123,547 + -0.0 1,123,547 + +0.1 1,123,547 + +1.2 1,123,683 - -1.0 1,123,691 + -0.3 1,123,691 + +0.2 1,123,692 - +0.9 1,123,692 - -1.2 1,123,692 - +0.7 1,123,710 + AO356_04990 0.10 -0.2 1,123,820 + AO356_04990 0.21 +0.2 1,123,821 - AO356_04990 0.21 -0.0 1,123,821 - AO356_04990 0.21 -0.4 1,123,832 + AO356_04990 0.22 -0.1 1,123,833 - AO356_04990 0.23 +0.4 1,123,880 + AO356_04990 0.27 +1.1 1,123,880 + AO356_04990 0.27 +0.2 1,123,880 + AO356_04990 0.27 -0.6 1,123,880 + AO356_04990 0.27 -0.1 1,123,880 + AO356_04990 0.27 -0.2 1,123,880 + AO356_04990 0.27 -0.2 1,123,880 + AO356_04990 0.27 +0.8 1,123,880 + AO356_04990 0.27 -0.3 1,123,881 - AO356_04990 0.27 +0.6 1,123,881 - AO356_04990 0.27 +0.1 1,123,881 - AO356_04990 0.27 +0.5 1,123,881 - AO356_04990 0.27 +0.8 1,123,881 - AO356_04990 0.27 -0.9 1,123,881 - AO356_04990 0.27 -0.1 1,123,881 - AO356_04990 0.27 -0.2 1,123,881 - AO356_04990 0.27 +0.8 1,123,881 - AO356_04990 0.27 -0.2 1,123,928 + AO356_04990 0.32 +0.2 1,123,929 - AO356_04990 0.32 -0.2 1,124,174 + AO356_04990 0.57 +0.3 1,124,174 + AO356_04990 0.57 -0.0 1,124,174 + AO356_04990 0.57 +0.1 1,124,174 + AO356_04990 0.57 +0.8 1,124,175 - AO356_04990 0.57 +0.2 1,124,175 - AO356_04990 0.57 -0.3 1,124,175 - AO356_04990 0.57 -0.3 1,124,175 - AO356_04990 0.57 +0.2 1,124,255 + AO356_04990 0.65 +0.5 1,124,256 - AO356_04990 0.65 -1.0 1,124,360 + AO356_04990 0.76 -0.1
Or see this region's nucleotide sequence