Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3801

Experiment: Tetracycline 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.002 mg/ml
3,901,821	-				+0.2
3,901,821	-				-1.5
3,901,846	-				+0.6
3,901,901	+				+1.1
3,901,901	+				+0.1
3,901,901	+				-1.9
3,901,902	-				+0.4
3,901,902	-				+1.0
3,901,902	-				+0.4
3,901,970	-				+0.9
3,902,101	+				-0.8
3,902,101	+				-0.5
3,902,101	+				+0.3
3,902,101	+				+0.5
3,902,101	+				-0.0
3,902,102	-				-0.6
3,902,102	-				-0.1
3,902,102	-				-1.8
3,902,102	-				+0.2
3,902,116	+				+0.1
3,902,116	+				-2.3
3,902,117	-				+0.2
3,902,117	-				+0.7
3,902,117	-				+0.9
3,902,117	-				-0.1
3,902,117	-				+0.5
3,902,131	+		Ga0059261_3799	0.10	-0.0
3,902,131	+		Ga0059261_3799	0.10	+0.2
3,902,131	+		Ga0059261_3799	0.10	+0.1
3,902,131	+		Ga0059261_3799	0.10	-0.2
3,902,132	-		Ga0059261_3799	0.11	-0.1
3,902,289	+				+0.1
3,902,290	-				+1.0
3,902,290	-				+0.2
3,902,363	+				+0.2
3,902,364	-				-0.0
3,902,422	+		Ga0059261_3800	0.28	+0.9
3,902,423	+		Ga0059261_3800	0.29	-0.1
3,902,423	+		Ga0059261_3800	0.29	-0.5
3,902,423	+		Ga0059261_3800	0.29	+0.3
3,902,423	+		Ga0059261_3800	0.29	+1.4
3,902,424	-		Ga0059261_3800	0.29	-0.9
3,902,424	-		Ga0059261_3800	0.29	-0.0
3,902,424	-		Ga0059261_3800	0.29	+1.5
3,902,424	-		Ga0059261_3800	0.29	-0.2
3,902,577	+				-0.3
3,902,578	-				+0.1
3,902,578	-				-0.2
3,902,578	-				-0.0
3,902,667	+				-0.9
3,902,685	-				+0.3
3,902,696	+				-0.7
3,902,696	+				+0.7
3,902,696	+				+0.2
3,902,696	+				+0.3
3,902,697	-				+0.2
3,902,697	-				+0.1
3,902,697	-				-0.1
3,902,697	-				-0.4
3,902,697	-				+2.3
3,902,697	-				+0.6
3,902,697	-				+0.8
3,902,697	-				-0.1
3,902,697	-				-0.2
3,902,697	-				+0.7
3,902,697	-				-0.6
3,902,698	+				+0.9
3,902,698	+				+0.5
3,902,699	-				-0.2
3,902,699	-				-0.2
3,902,722	-				+0.5
3,902,722	-				+1.5
3,902,749	-				+0.6
3,902,749	-				-1.2
3,902,749	-				+0.9
3,902,769	+				+0.1
3,902,769	+				+0.0
3,902,769	+				+0.1
3,902,770	-				-0.3
3,902,770	-				-0.9
3,902,770	-				-1.3
3,902,770	-				-0.1
3,903,069	+		Ga0059261_3801	0.32	+0.6
3,903,069	+		Ga0059261_3801	0.32	+0.2
3,903,069	+		Ga0059261_3801	0.32	-0.4
3,903,069	+		Ga0059261_3801	0.32	+1.1
3,903,069	+		Ga0059261_3801	0.32	-0.4
3,903,069	+		Ga0059261_3801	0.32	+1.5
3,903,070	-		Ga0059261_3801	0.32	+1.2
3,903,070	-		Ga0059261_3801	0.32	-0.7
3,903,129	+		Ga0059261_3801	0.38	+0.0
3,903,193	-		Ga0059261_3801	0.44	+1.3
3,903,588	+		Ga0059261_3801	0.83	-1.6
3,903,848	+				-0.6
3,903,848	+				-0.1
3,903,848	+				-2.6
3,903,848	+				+1.0
3,903,848	+				+0.7
3,903,848	+				+0.9
3,903,848	+				+0.2
3,903,848	+				+0.3
3,903,848	+				+1.2
3,903,848	+				-0.5
3,903,848	+				-0.3
3,903,848	+				-0.8
3,903,849	-				-0.1
3,903,849	-				+0.1
3,903,849	-				-0.0
3,903,849	-				-1.1
3,903,849	-				-0.7
3,903,849	-				+0.6
3,903,890	+		Ga0059261_3802	0.11	-1.1
3,903,890	+		Ga0059261_3802	0.11	-0.1
3,903,891	-				+2.2
3,903,891	-		Ga0059261_3802	0.11	+1.0
3,903,891	-		Ga0059261_3802	0.11	-0.2
3,904,097	+		Ga0059261_3802	0.30	-0.4
3,904,098	-		Ga0059261_3802	0.30	+0.4
3,904,098	-		Ga0059261_3802	0.30	-0.1
3,904,098	-		Ga0059261_3802	0.30	+0.9
3,904,098	-		Ga0059261_3802	0.30	-0.2
3,904,098	-		Ga0059261_3802	0.30	-0.8
3,904,098	-		Ga0059261_3802	0.30	+0.0
3,904,099	+		Ga0059261_3802	0.30	-0.8
3,904,099	+				-0.1
3,904,099	+		Ga0059261_3802	0.30	+2.4
3,904,099	+		Ga0059261_3802	0.30	+0.1
3,904,100	-		Ga0059261_3802	0.30	+0.9
3,904,100	-		Ga0059261_3802	0.30	+0.7
3,904,100	-		Ga0059261_3802	0.30	-0.3
3,904,100	-		Ga0059261_3802	0.30	+0.1
3,904,100	-		Ga0059261_3802	0.30	+0.2
3,904,272	+		Ga0059261_3802	0.45	+0.1
3,904,273	-		Ga0059261_3802	0.46	-0.2
3,904,428	+		Ga0059261_3802	0.60	-0.2
3,904,428	+		Ga0059261_3802	0.60	-0.9
3,904,429	-		Ga0059261_3802	0.60	-0.0