Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2809

Experiment: Tetracycline 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.002 mg/ml
2,916,161	+		Ga0059261_2808	0.25	+0.0
2,916,161	+		Ga0059261_2808	0.25	+0.7
2,916,161	+		Ga0059261_2808	0.25	-0.6
2,916,161	+		Ga0059261_2808	0.25	-0.3
2,916,161	+		Ga0059261_2808	0.25	-0.2
2,916,161	+		Ga0059261_2808	0.25	-1.6
2,916,161	+		Ga0059261_2808	0.25	-0.8
2,916,161	+		Ga0059261_2808	0.25	-0.3
2,916,162	-		Ga0059261_2808	0.25	-0.6
2,916,162	-		Ga0059261_2808	0.25	+0.1
2,916,162	-		Ga0059261_2808	0.25	+0.6
2,916,162	-		Ga0059261_2808	0.25	-1.7
2,916,162	-		Ga0059261_2808	0.25	+0.2
2,916,162	-		Ga0059261_2808	0.25	+1.0
2,916,162	-		Ga0059261_2808	0.25	+0.3
2,916,209	-		Ga0059261_2808	0.29	+0.5
2,916,296	+		Ga0059261_2808	0.36	+0.8
2,916,297	-		Ga0059261_2808	0.36	-0.2
2,916,297	-		Ga0059261_2808	0.36	-0.3
2,916,297	-		Ga0059261_2808	0.36	-0.1
2,916,298	+		Ga0059261_2808	0.36	-0.4
2,916,298	+		Ga0059261_2808	0.36	+0.7
2,916,299	-		Ga0059261_2808	0.36	+3.0
2,916,299	-				+0.0
2,916,299	-		Ga0059261_2808	0.36	+0.7
2,916,299	-		Ga0059261_2808	0.36	-1.0
2,916,299	-		Ga0059261_2808	0.36	+0.0
2,916,299	-		Ga0059261_2808	0.36	+0.0
2,916,299	-		Ga0059261_2808	0.36	-1.0
2,916,309	-		Ga0059261_2808	0.37	-0.6
2,916,309	-		Ga0059261_2808	0.37	-0.3
2,916,344	+		Ga0059261_2808	0.40	-0.7
2,916,344	+		Ga0059261_2808	0.40	+0.5
2,916,344	+		Ga0059261_2808	0.40	-0.2
2,916,345	-		Ga0059261_2808	0.40	+0.6
2,916,368	+		Ga0059261_2808	0.42	-0.3
2,916,368	+		Ga0059261_2808	0.42	-1.6
2,916,368	+		Ga0059261_2808	0.42	-0.0
2,916,368	+		Ga0059261_2808	0.42	-0.4
2,916,368	+		Ga0059261_2808	0.42	+0.7
2,916,369	-		Ga0059261_2808	0.42	-1.1
2,916,456	+		Ga0059261_2808	0.50	+1.6
2,916,456	+		Ga0059261_2808	0.50	-0.8
2,916,457	-				+1.0
2,916,473	+		Ga0059261_2808	0.51	+0.8
2,916,473	+		Ga0059261_2808	0.51	-0.4
2,916,473	+		Ga0059261_2808	0.51	-0.3
2,916,473	+		Ga0059261_2808	0.51	-2.4
2,916,473	+				+2.0
2,916,473	+				+2.6
2,916,473	+		Ga0059261_2808	0.51	+0.0
2,916,473	+		Ga0059261_2808	0.51	-0.4
2,916,473	+		Ga0059261_2808	0.51	-0.0
2,916,473	+		Ga0059261_2808	0.51	+0.4
2,916,473	+		Ga0059261_2808	0.51	+0.0
2,916,474	-		Ga0059261_2808	0.51	+0.2
2,916,474	-		Ga0059261_2808	0.51	-0.1
2,916,474	-		Ga0059261_2808	0.51	-0.3
2,916,474	-		Ga0059261_2808	0.51	-0.4
2,916,474	-		Ga0059261_2808	0.51	-1.0
2,916,474	-		Ga0059261_2808	0.51	-0.5
2,916,743	+		Ga0059261_2808	0.74	-0.4
2,916,743	+		Ga0059261_2808	0.74	-3.1
2,916,743	+		Ga0059261_2808	0.74	+2.0
2,916,743	+		Ga0059261_2808	0.74	+0.4
2,916,744	-		Ga0059261_2808	0.74	-0.2
2,916,744	-		Ga0059261_2808	0.74	+0.0
2,916,744	-		Ga0059261_2808	0.74	-1.1
2,916,744	-		Ga0059261_2808	0.74	-0.6
2,917,179	+				+0.0
2,917,179	+				-1.4
2,917,180	-				+0.0
2,917,180	-				+0.0
2,917,180	-				-0.3
2,917,264	+		Ga0059261_2809	0.12	-0.5
2,917,265	-		Ga0059261_2809	0.12	-0.8
2,917,265	-		Ga0059261_2809	0.12	+0.7
2,917,353	+		Ga0059261_2809	0.18	-0.7
2,917,353	+		Ga0059261_2809	0.18	+0.9
2,917,353	+				+0.0
2,917,353	+		Ga0059261_2809	0.18	+0.3
2,917,353	+		Ga0059261_2809	0.18	-0.1
2,917,353	+		Ga0059261_2809	0.18	-1.8
2,917,353	+		Ga0059261_2809	0.18	-0.2
2,917,353	+		Ga0059261_2809	0.18	-1.1
2,917,353	+		Ga0059261_2809	0.18	+0.7
2,917,353	+		Ga0059261_2809	0.18	-0.6
2,917,353	+		Ga0059261_2809	0.18	-0.3
2,917,354	-		Ga0059261_2809	0.18	+0.8
2,917,354	-		Ga0059261_2809	0.18	-0.2
2,917,354	-		Ga0059261_2809	0.18	+0.0
2,917,354	-		Ga0059261_2809	0.18	+0.0
2,917,354	-		Ga0059261_2809	0.18	-0.1
2,917,355	+		Ga0059261_2809	0.18	+0.5
2,917,355	+		Ga0059261_2809	0.18	+0.4
2,917,355	+		Ga0059261_2809	0.18	-0.1
2,917,355	+		Ga0059261_2809	0.18	-0.9
2,917,355	+		Ga0059261_2809	0.18	+0.8
2,917,355	+		Ga0059261_2809	0.18	-1.1
2,917,355	+		Ga0059261_2809	0.18	+0.6
2,917,356	-		Ga0059261_2809	0.18	-0.3
2,917,356	-		Ga0059261_2809	0.18	+1.4
2,917,356	-		Ga0059261_2809	0.18	+0.7
2,917,356	-		Ga0059261_2809	0.18	+0.7
2,917,356	-		Ga0059261_2809	0.18	+0.2
2,917,356	-		Ga0059261_2809	0.18	+0.4
2,917,356	-		Ga0059261_2809	0.18	+1.0
2,917,356	-		Ga0059261_2809	0.18	+1.0
2,917,365	+		Ga0059261_2809	0.18	+1.7
2,917,365	+		Ga0059261_2809	0.18	-0.3
2,917,365	+		Ga0059261_2809	0.18	-0.6
2,917,365	+		Ga0059261_2809	0.18	+0.6
2,917,366	-		Ga0059261_2809	0.19	-0.2
2,917,366	-		Ga0059261_2809	0.19	+0.6
2,917,366	-		Ga0059261_2809	0.19	-1.0
2,917,366	-		Ga0059261_2809	0.19	+0.7
2,917,366	-		Ga0059261_2809	0.19	-0.1
2,917,366	-		Ga0059261_2809	0.19	-0.9
2,917,422	+		Ga0059261_2809	0.22	+0.3
2,917,422	+		Ga0059261_2809	0.22	+1.5
2,917,422	+				+0.3
2,917,422	+		Ga0059261_2809	0.22	-1.6
2,917,422	+		Ga0059261_2809	0.22	+1.1
2,917,422	+		Ga0059261_2809	0.22	-2.9
2,917,422	+		Ga0059261_2809	0.22	-1.9
2,917,422	+		Ga0059261_2809	0.22	+0.4
2,917,423	-				+1.0
2,917,423	-		Ga0059261_2809	0.22	+0.4
2,917,423	-		Ga0059261_2809	0.22	+0.3
2,917,423	-		Ga0059261_2809	0.22	+0.2
2,917,423	-		Ga0059261_2809	0.22	+1.0
2,917,423	-		Ga0059261_2809	0.22	-0.8
2,917,423	-		Ga0059261_2809	0.22	+0.0
2,917,472	-		Ga0059261_2809	0.25	+0.3
2,917,608	+		Ga0059261_2809	0.33	+0.1
2,917,608	+		Ga0059261_2809	0.33	+0.1
2,917,608	+		Ga0059261_2809	0.33	+1.0
2,917,608	+		Ga0059261_2809	0.33	+0.5
2,917,609	-		Ga0059261_2809	0.33	+0.9
2,917,609	-				-0.2
2,917,609	-		Ga0059261_2809	0.33	+0.2
2,917,609	-		Ga0059261_2809	0.33	-0.1
2,917,659	+		Ga0059261_2809	0.37	+1.0
2,917,659	+		Ga0059261_2809	0.37	+0.3
2,917,659	+		Ga0059261_2809	0.37	+0.1
2,917,659	+		Ga0059261_2809	0.37	+1.4
2,917,659	+		Ga0059261_2809	0.37	+0.6
2,917,659	+		Ga0059261_2809	0.37	+0.0
2,917,660	-		Ga0059261_2809	0.37	+1.2
2,917,660	-		Ga0059261_2809	0.37	-0.2
2,917,660	-		Ga0059261_2809	0.37	-0.1
2,917,660	-		Ga0059261_2809	0.37	+0.1
2,917,660	-				-0.6
2,917,660	-		Ga0059261_2809	0.37	-0.3
2,917,660	-		Ga0059261_2809	0.37	+0.7
2,917,660	-				+0.0
2,917,701	+		Ga0059261_2809	0.39	+0.2
2,917,701	+		Ga0059261_2809	0.39	+0.3
2,917,701	+		Ga0059261_2809	0.39	+0.1
2,917,702	-		Ga0059261_2809	0.39	+0.1
2,917,702	-		Ga0059261_2809	0.39	+0.8
2,917,702	-		Ga0059261_2809	0.39	-1.3
2,917,702	-		Ga0059261_2809	0.39	+0.7
2,917,702	-		Ga0059261_2809	0.39	+0.5
2,917,702	-		Ga0059261_2809	0.39	-0.2
2,917,751	-		Ga0059261_2809	0.42	+1.4
2,917,756	-		Ga0059261_2809	0.42	-1.9
2,917,756	-		Ga0059261_2809	0.42	+0.3
2,917,756	-		Ga0059261_2809	0.42	+0.2
2,917,806	+		Ga0059261_2809	0.46	+0.0
2,917,807	-		Ga0059261_2809	0.46	-0.4
2,917,807	-		Ga0059261_2809	0.46	+0.5
2,917,871	+		Ga0059261_2809	0.50	+0.0
2,917,871	+		Ga0059261_2809	0.50	-0.5
2,917,871	+		Ga0059261_2809	0.50	+0.3
2,917,871	+		Ga0059261_2809	0.50	+0.0
2,917,871	+		Ga0059261_2809	0.50	+0.0
2,917,872	-		Ga0059261_2809	0.50	+0.8
2,917,872	-		Ga0059261_2809	0.50	-0.3
2,917,932	+		Ga0059261_2809	0.53	-0.3
2,917,932	+		Ga0059261_2809	0.53	+0.4
2,917,932	+		Ga0059261_2809	0.53	-0.2
2,917,932	+		Ga0059261_2809	0.53	+0.3
2,917,933	-		Ga0059261_2809	0.53	-0.7
2,918,037	+		Ga0059261_2809	0.60	-1.4
2,918,037	+		Ga0059261_2809	0.60	+0.1
2,918,037	+		Ga0059261_2809	0.60	+0.4
2,918,037	+		Ga0059261_2809	0.60	+0.2
2,918,227	-		Ga0059261_2809	0.71	+0.1
2,918,319	+		Ga0059261_2809	0.77	+0.1
2,918,319	+		Ga0059261_2809	0.77	-0.5
2,918,319	+		Ga0059261_2809	0.77	+1.6
2,918,320	-		Ga0059261_2809	0.77	+2.6
2,918,320	-		Ga0059261_2809	0.77	-0.5
2,918,320	-		Ga0059261_2809	0.77	+0.4
2,918,343	+		Ga0059261_2809	0.79	-1.2
2,918,343	+		Ga0059261_2809	0.79	+0.1
2,918,344	-		Ga0059261_2809	0.79	+0.0
2,918,344	-		Ga0059261_2809	0.79	+1.0
2,918,344	-		Ga0059261_2809	0.79	+0.9
2,918,344	-		Ga0059261_2809	0.79	-0.0
2,918,366	+		Ga0059261_2809	0.80	-1.0
2,918,366	+		Ga0059261_2809	0.80	-0.3
2,918,366	+		Ga0059261_2809	0.80	-0.2
2,918,367	-		Ga0059261_2809	0.80	-0.3
2,918,367	-		Ga0059261_2809	0.80	-0.2
2,918,367	-		Ga0059261_2809	0.80	+0.2
2,918,541	+				-1.3
2,918,541	+				+0.2
2,918,542	-				+0.5
2,918,561	+				-0.3
2,918,613	+				+0.0
2,918,613	+				+1.6
2,918,614	-				+1.0
2,918,614	-				+1.6
2,918,614	-				-2.4
2,918,614	-				+0.3
2,918,614	-				+0.3
2,918,614	-				-1.2
2,918,704	+				-0.0
2,918,704	+				-0.0
2,918,704	+				-0.6
2,918,704	+				+0.2
2,918,705	-				-0.9
2,918,705	-				+0.1
2,918,705	-				+0.6
2,918,705	-				-0.1
2,918,705	-				-1.0
2,918,705	-				+0.3
2,918,726	-				-1.3
2,918,726	-				-1.1
2,918,726	-				+0.2
2,918,726	-				-0.6
2,918,815	-				-0.1
2,918,836	+				-0.1
2,918,836	+				+0.2
2,918,836	+				+1.0
2,918,836	+				-0.1
2,918,836	+				+0.3
2,918,836	+				+1.8
2,918,836	+				-0.5
2,918,836	+				-0.8
2,918,836	+				+1.0
2,918,836	+				+0.6
2,918,836	+				+0.3
2,918,836	+				-0.3
2,918,836	+				+0.2
2,918,836	+				-0.7
2,918,837	-				+0.3
2,918,837	-				+0.3
2,918,837	-				-2.2
2,918,837	-				-0.9
2,918,837	-				-0.9
2,918,837	-				+0.2
2,918,837	-				+0.4
2,918,837	-				+1.2
2,918,837	-				-0.1
2,918,837	-				+1.5
2,918,837	-				-0.6
2,918,837	-				+0.4
2,918,917	+		Ga0059261_2810	0.11	-2.0
2,918,917	+		Ga0059261_2810	0.11	+0.5
2,918,918	-		Ga0059261_2810	0.11	+0.6
2,918,918	-		Ga0059261_2810	0.11	+0.3
2,918,980	+		Ga0059261_2810	0.16	-0.1
2,918,980	+		Ga0059261_2810	0.16	-0.3
2,918,980	+				-0.6
2,918,980	+		Ga0059261_2810	0.16	-0.4
2,918,981	-		Ga0059261_2810	0.16	-0.8
2,918,981	-		Ga0059261_2810	0.16	-1.4
2,918,981	-		Ga0059261_2810	0.16	-0.1
2,918,981	-		Ga0059261_2810	0.16	-0.2
2,918,981	-		Ga0059261_2810	0.16	+0.0
2,918,981	-		Ga0059261_2810	0.16	+1.8
2,918,981	-		Ga0059261_2810	0.16	+0.2
2,919,166	+		Ga0059261_2810	0.30	+0.0
2,919,167	-		Ga0059261_2810	0.30	-0.4
2,919,167	-				-1.6
2,919,167	-		Ga0059261_2810	0.30	-0.5
2,919,167	-		Ga0059261_2810	0.30	+0.4
2,919,168	+		Ga0059261_2810	0.30	-0.7
2,919,168	+		Ga0059261_2810	0.30	-1.0
2,919,168	+		Ga0059261_2810	0.30	-1.0
2,919,169	-		Ga0059261_2810	0.30	-0.2
2,919,169	-		Ga0059261_2810	0.30	-0.1
2,919,169	-		Ga0059261_2810	0.30	+2.7
2,919,180	+		Ga0059261_2810	0.31	-1.0
2,919,180	+		Ga0059261_2810	0.31	-1.2
2,919,180	+		Ga0059261_2810	0.31	-1.9
2,919,238	+		Ga0059261_2810	0.35	+0.7
2,919,238	+		Ga0059261_2810	0.35	+0.6
2,919,239	-		Ga0059261_2810	0.35	+0.1
2,919,412	-				+1.0
2,919,412	-		Ga0059261_2810	0.48	-1.8
2,919,587	-		Ga0059261_2810	0.61	-0.7
2,919,587	-		Ga0059261_2810	0.61	+0.2