Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2558

Experiment: Tetracycline 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.002 mg/ml
2,646,052	-		Ga0059261_2557	0.11	-0.8
2,646,052	-		Ga0059261_2557	0.11	+0.8
2,646,120	+		Ga0059261_2557	0.17	-0.6
2,646,120	+		Ga0059261_2557	0.17	-1.2
2,646,120	+		Ga0059261_2557	0.17	-0.4
2,646,120	+		Ga0059261_2557	0.17	+0.8
2,646,120	+		Ga0059261_2557	0.17	+0.1
2,646,120	+		Ga0059261_2557	0.17	-0.3
2,646,121	-		Ga0059261_2557	0.17	-0.9
2,646,121	-		Ga0059261_2557	0.17	-0.9
2,646,121	-		Ga0059261_2557	0.17	-1.9
2,646,121	-		Ga0059261_2557	0.17	-0.4
2,646,121	-		Ga0059261_2557	0.17	-1.0
2,646,121	-		Ga0059261_2557	0.17	+0.8
2,646,121	-		Ga0059261_2557	0.17	+0.2
2,646,138	+		Ga0059261_2557	0.19	+0.6
2,646,138	+		Ga0059261_2557	0.19	+0.3
2,646,138	+		Ga0059261_2557	0.19	-0.3
2,646,138	+		Ga0059261_2557	0.19	+0.8
2,646,139	-		Ga0059261_2557	0.19	+0.3
2,646,139	-		Ga0059261_2557	0.19	+0.1
2,646,139	-		Ga0059261_2557	0.19	+1.8
2,646,139	-		Ga0059261_2557	0.19	-0.9
2,646,139	-		Ga0059261_2557	0.19	+0.1
2,646,139	-		Ga0059261_2557	0.19	+0.6
2,646,139	-		Ga0059261_2557	0.19	+0.1
2,646,201	-		Ga0059261_2557	0.25	+1.3
2,646,220	-		Ga0059261_2557	0.27	-0.2
2,646,358	+		Ga0059261_2557	0.41	+0.9
2,646,358	+				+2.7
2,646,358	+		Ga0059261_2557	0.41	+0.8
2,646,359	-		Ga0059261_2557	0.41	-0.3
2,646,359	-		Ga0059261_2557	0.41	+0.2
2,646,359	-		Ga0059261_2557	0.41	+1.2
2,646,509	+		Ga0059261_2557	0.55	-1.2
2,646,509	+		Ga0059261_2557	0.55	-0.0
2,646,509	+		Ga0059261_2557	0.55	+0.5
2,646,509	+		Ga0059261_2557	0.55	+0.1
2,646,509	+		Ga0059261_2557	0.55	-0.1
2,646,509	+		Ga0059261_2557	0.55	-0.5
2,646,509	+		Ga0059261_2557	0.55	-1.1
2,646,510	-		Ga0059261_2557	0.55	-0.0
2,646,510	-		Ga0059261_2557	0.55	+0.3
2,646,510	-		Ga0059261_2557	0.55	-1.2
2,646,763	+		Ga0059261_2557	0.80	+0.3
2,646,764	-		Ga0059261_2557	0.80	-0.1
2,646,782	+		Ga0059261_2557	0.82	-0.2
2,646,782	+		Ga0059261_2557	0.82	+1.1
2,646,782	+		Ga0059261_2557	0.82	+0.6
2,646,783	-		Ga0059261_2557	0.82	+0.5
2,646,783	-		Ga0059261_2557	0.82	-0.0
2,646,783	-		Ga0059261_2557	0.82	-0.9
2,646,783	-		Ga0059261_2557	0.82	-1.0
2,646,783	-				+1.1
2,646,839	-		Ga0059261_2557	0.87	-0.3
2,646,846	+		Ga0059261_2557	0.88	-0.9
2,646,847	-		Ga0059261_2557	0.88	-0.6
2,646,847	-		Ga0059261_2557	0.88	+0.5
2,646,984	+				+0.1
2,646,984	+				-0.8
2,646,985	-				-0.7
2,646,985	-				+0.1
2,646,985	-				-0.8
2,646,985	-				-2.2
2,646,988	+				-0.2
2,646,988	+				+0.2
2,647,086	+		Ga0059261_2558	0.31	+0.4
2,647,086	+		Ga0059261_2558	0.31	+2.7
2,647,087	-		Ga0059261_2558	0.31	+0.1
2,647,087	-		Ga0059261_2558	0.31	+0.4
2,647,087	-		Ga0059261_2558	0.31	-0.7
2,647,122	+		Ga0059261_2558	0.40	+1.1
2,647,122	+		Ga0059261_2558	0.40	+0.8
2,647,122	+		Ga0059261_2558	0.40	+0.6
2,647,122	+		Ga0059261_2558	0.40	-0.3
2,647,123	-		Ga0059261_2558	0.40	+1.1
2,647,123	-		Ga0059261_2558	0.40	-0.2
2,647,123	-		Ga0059261_2558	0.40	-0.7
2,647,123	-		Ga0059261_2558	0.40	+1.5
2,647,123	-		Ga0059261_2558	0.40	-0.0
2,647,195	+		Ga0059261_2558	0.59	-2.1
2,647,241	+		Ga0059261_2558	0.71	+0.5
2,647,241	+		Ga0059261_2558	0.71	-0.3
2,647,241	+		Ga0059261_2558	0.71	+1.1
2,647,241	+				+0.4
2,647,242	-		Ga0059261_2558	0.72	+0.3
2,647,242	-		Ga0059261_2558	0.72	+0.1
2,647,245	+		Ga0059261_2558	0.72	+0.0
2,647,376	-				-0.2
2,647,376	-				-0.2
2,647,403	+				-0.5
2,647,404	-				+0.4
2,647,495	+		Ga0059261_2559	0.22	+0.1
2,647,495	+		Ga0059261_2559	0.22	+0.7
2,647,495	+		Ga0059261_2559	0.22	-0.3
2,647,496	-		Ga0059261_2559	0.22	+1.1
2,647,496	-		Ga0059261_2559	0.22	-0.7
2,647,496	-		Ga0059261_2559	0.22	-0.6
2,647,496	-		Ga0059261_2559	0.22	+1.8
2,647,496	-		Ga0059261_2559	0.22	-0.1
2,647,496	-		Ga0059261_2559	0.22	+1.4
2,647,496	-		Ga0059261_2559	0.22	+0.6
2,647,496	-		Ga0059261_2559	0.22	+0.1
2,647,496	-		Ga0059261_2559	0.22	+0.7
2,647,637	+		Ga0059261_2559	0.43	+0.3
2,647,637	+		Ga0059261_2559	0.43	-0.7
2,647,637	+		Ga0059261_2559	0.43	+0.3
2,647,637	+		Ga0059261_2559	0.43	+0.4
2,647,638	-		Ga0059261_2559	0.43	+0.1
2,647,638	-		Ga0059261_2559	0.43	+1.0
2,647,638	-		Ga0059261_2559	0.43	+0.5
2,647,638	-		Ga0059261_2559	0.43	-0.6
2,647,638	-		Ga0059261_2559	0.43	-0.1
2,647,638	-		Ga0059261_2559	0.43	-0.4
2,647,639	+		Ga0059261_2559	0.43	+0.7
2,647,639	+		Ga0059261_2559	0.43	+0.4
2,647,639	+		Ga0059261_2559	0.43	-0.8
2,647,639	+		Ga0059261_2559	0.43	+0.2
2,647,640	-		Ga0059261_2559	0.43	-2.1
2,647,640	-		Ga0059261_2559	0.43	+0.2
2,647,640	-		Ga0059261_2559	0.43	+0.1
2,647,640	-		Ga0059261_2559	0.43	+0.3
2,647,640	-		Ga0059261_2559	0.43	-0.3
2,647,652	+		Ga0059261_2559	0.45	+0.2
2,647,652	+		Ga0059261_2559	0.45	-0.7
2,647,652	+		Ga0059261_2559	0.45	-0.6
2,647,652	+		Ga0059261_2559	0.45	-0.8
2,647,653	-		Ga0059261_2559	0.45	-0.2
2,647,653	-		Ga0059261_2559	0.45	-0.1
2,647,653	-		Ga0059261_2559	0.45	-0.6
2,647,766	+		Ga0059261_2559	0.61	+0.2
2,647,853	-		Ga0059261_2559	0.74	-0.4
2,647,853	-		Ga0059261_2559	0.74	-1.2
2,647,853	-		Ga0059261_2559	0.74	+0.6
2,647,872	+		Ga0059261_2559	0.77	+0.4
2,647,872	+		Ga0059261_2559	0.77	-0.9
2,647,872	+		Ga0059261_2559	0.77	-1.2
2,647,872	+		Ga0059261_2559	0.77	+0.5
2,647,873	-		Ga0059261_2559	0.77	-0.1
2,647,899	+		Ga0059261_2559	0.81	+0.1
2,647,899	+		Ga0059261_2559	0.81	+0.1
2,647,899	+		Ga0059261_2559	0.81	+0.4
2,647,899	+		Ga0059261_2559	0.81	+0.3
2,647,899	+		Ga0059261_2559	0.81	+0.8
2,647,899	+		Ga0059261_2559	0.81	+0.3
2,647,899	+		Ga0059261_2559	0.81	+0.4
2,647,900	-		Ga0059261_2559	0.81	-1.2
2,647,900	-		Ga0059261_2559	0.81	-0.0
2,647,900	-		Ga0059261_2559	0.81	-0.3
2,647,900	-		Ga0059261_2559	0.81	-0.1
2,647,900	-		Ga0059261_2559	0.81	+1.1
2,647,900	-		Ga0059261_2559	0.81	+0.5
2,647,900	-		Ga0059261_2559	0.81	+1.1
2,647,900	-		Ga0059261_2559	0.81	+0.8
2,647,900	-		Ga0059261_2559	0.81	+0.6
2,647,900	-		Ga0059261_2559	0.81	-0.8
2,647,937	+		Ga0059261_2559	0.86	-0.0
2,647,937	+		Ga0059261_2559	0.86	+0.3
2,647,938	-		Ga0059261_2559	0.87	-0.0
2,647,938	-		Ga0059261_2559	0.87	-1.1
2,648,149	+				+0.7
2,648,259	+		Ga0059261_2560	0.15	-0.4
2,648,313	-		Ga0059261_2560	0.23	+0.1
2,648,339	+		Ga0059261_2560	0.26	+0.4
2,648,339	+		Ga0059261_2560	0.26	-1.2
2,648,339	+		Ga0059261_2560	0.26	-2.0
2,648,339	+		Ga0059261_2560	0.26	+0.6
2,648,340	-		Ga0059261_2560	0.26	-0.3
2,648,340	-		Ga0059261_2560	0.26	+0.3
2,648,340	-		Ga0059261_2560	0.26	+0.4
2,648,340	-		Ga0059261_2560	0.26	+0.8