Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1783

Experiment: Tetracycline 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.002 mg/ml
1,892,585	-		Ga0059261_1781	0.44	-0.2
1,892,585	-		Ga0059261_1781	0.44	+0.3
1,892,603	+		Ga0059261_1781	0.47	+0.9
1,892,708	+		Ga0059261_1781	0.62	+0.5
1,892,708	+		Ga0059261_1781	0.62	-0.8
1,892,708	+		Ga0059261_1781	0.62	-0.5
1,892,709	-		Ga0059261_1781	0.63	+2.0
1,892,709	-		Ga0059261_1781	0.63	-0.2
1,892,709	-		Ga0059261_1781	0.63	+0.1
1,892,713	+		Ga0059261_1781	0.63	+0.5
1,892,713	+		Ga0059261_1781	0.63	+0.7
1,892,714	-		Ga0059261_1781	0.63	+0.4
1,892,714	-		Ga0059261_1781	0.63	+0.4
1,892,714	-		Ga0059261_1781	0.63	-0.2
1,892,714	-		Ga0059261_1781	0.63	+1.0
1,892,843	+		Ga0059261_1781	0.82	-0.2
1,892,843	+		Ga0059261_1781	0.82	+0.2
1,892,843	+		Ga0059261_1781	0.82	-0.1
1,892,843	+		Ga0059261_1781	0.82	-1.4
1,892,863	+		Ga0059261_1781	0.85	-1.0
1,892,863	+		Ga0059261_1781	0.85	+0.0
1,892,864	-		Ga0059261_1781	0.85	+1.0
1,892,905	+				+0.9
1,892,905	+				+0.2
1,892,905	+				+0.7
1,892,905	+				-0.1
1,892,905	+				-0.5
1,892,906	-				-0.3
1,892,906	-				-0.2
1,892,906	-				+0.9
1,892,945	+				-0.0
1,892,945	+				-0.2
1,892,945	+				+0.4
1,892,963	+				+0.3
1,892,963	+				+0.4
1,892,963	+				-0.1
1,892,964	-				+0.5
1,892,964	-				+0.1
1,892,976	+				+0.5
1,892,976	+				+1.8
1,892,976	+				+0.4
1,892,976	+				-2.0
1,892,976	+				-0.9
1,892,976	+				+0.6
1,892,977	-				-0.4
1,892,977	-				+0.2
1,892,993	+				+0.2
1,892,993	+				+1.3
1,892,994	-				+0.0
1,893,092	+				-1.3
1,893,092	+				-0.4
1,893,092	+				+0.2
1,893,092	+				+1.6
1,893,093	-				-0.7
1,893,093	-				-1.0
1,893,093	-				-0.8
1,893,106	+				+0.7
1,893,106	+				+0.5
1,893,106	+				+0.3
1,893,106	+				+0.5
1,893,107	-				-2.0
1,893,107	-				-1.5
1,893,107	-				+0.5
1,893,108	+				+0.6
1,893,108	+				+0.6
1,893,108	+				+0.5
1,893,108	+				+0.0
1,893,108	+				+0.4
1,893,109	-				+0.8
1,893,109	-				-0.9
1,893,109	-				+0.2
1,893,109	-				+2.3
1,893,109	-				-0.5
1,893,109	-				-0.1
1,893,116	+				-0.8
1,893,116	+				+1.0
1,893,117	-				+1.3
1,893,141	+				+0.3
1,893,168	+				+1.0
1,893,169	-				+0.1
1,893,187	+				+1.2
1,893,187	+				+0.3
1,893,188	-				+1.2
1,893,188	-				-0.8
1,893,188	-				-0.0
1,893,239	+				-0.2
1,893,239	+				+0.0
1,893,240	-				+0.0
1,893,246	+				-0.3
1,893,246	+				-0.0
1,893,246	+				+0.3
1,893,254	+				-0.2
1,893,254	+				-0.2
1,893,254	+				+1.6
1,893,255	-				-0.5
1,893,255	-				+0.0
1,893,255	-				-0.6
1,893,255	-				+1.5
1,893,255	-				-0.2
1,893,255	-				+0.0
1,893,255	-				+2.0
1,893,323	+		Ga0059261_1782	0.30	-0.4
1,893,323	+		Ga0059261_1782	0.30	+0.0
1,893,323	+		Ga0059261_1782	0.30	+0.9
1,893,324	-		Ga0059261_1782	0.31	-0.0
1,893,324	-		Ga0059261_1782	0.31	+1.2
1,893,324	-		Ga0059261_1782	0.31	+0.2
1,893,324	-		Ga0059261_1782	0.31	+0.8
1,893,324	-		Ga0059261_1782	0.31	+1.0
1,893,324	-				-1.3
1,893,444	+		Ga0059261_1782	0.74	-1.1
1,893,444	+		Ga0059261_1782	0.74	-1.0
1,893,445	-		Ga0059261_1782	0.74	+0.2
1,893,497	+				+0.2
1,893,497	+				+0.0
1,893,497	+				-0.1
1,893,497	+				-0.5
1,893,498	-				-0.0
1,893,549	+				-0.4
1,893,549	+				-0.5
1,893,823	+		Ga0059261_1783	0.57	+0.5
1,893,823	+		Ga0059261_1783	0.57	+0.4
1,893,823	+		Ga0059261_1783	0.57	+0.3
1,893,823	+		Ga0059261_1783	0.57	+0.6
1,893,823	+		Ga0059261_1783	0.57	+0.0
1,893,823	+		Ga0059261_1783	0.57	+0.3
1,893,824	-		Ga0059261_1783	0.57	-1.2
1,893,824	-		Ga0059261_1783	0.57	+0.2
1,893,824	-		Ga0059261_1783	0.57	-2.4
1,893,824	-		Ga0059261_1783	0.57	-0.5
1,893,824	-		Ga0059261_1783	0.57	+0.0
1,893,824	-		Ga0059261_1783	0.57	+0.9
1,893,824	-		Ga0059261_1783	0.57	-0.4
1,893,824	-		Ga0059261_1783	0.57	-0.2
1,893,824	-		Ga0059261_1783	0.57	+0.4
1,893,845	-		Ga0059261_1783	0.62	-1.4
1,893,994	+				+0.8
1,893,995	-				-1.2
1,894,201	-				+0.8
1,894,201	-				-0.6
1,894,222	+				-0.4
1,894,222	+				-0.2
1,894,222	+				+0.5
1,894,222	+				-0.2
1,894,222	+				+1.0
1,894,222	+				+0.7
1,894,223	-				-0.5
1,894,223	-				-0.6
1,894,223	-				+0.0
1,894,245	+				-0.1
1,894,246	-				-0.0
1,894,246	-				+0.2
1,894,246	-				+0.9
1,894,260	+				-0.4
1,894,260	+				-0.4
1,894,260	+				+0.4
1,894,260	+				+2.0
1,894,260	+				-0.1
1,894,261	-				+0.3
1,894,261	-				+0.0
1,894,292	+				-0.5
1,894,292	+				-0.2
1,894,292	+				+0.1
1,894,292	+				-0.6
1,894,292	+				-0.1
1,894,292	+				+0.8
1,894,292	+				+0.5
1,894,292	+				+0.5
1,894,293	-				-0.5
1,894,293	-				-0.4
1,894,293	-				+0.4
1,894,293	-				+0.4
1,894,293	-				-0.3
1,894,293	-				-0.1
1,894,293	-				+0.6
1,894,324	+				-0.6
1,894,346	+				-0.2
1,894,346	+				+2.6
1,894,346	+				+0.8
1,894,346	+				+0.0
1,894,347	-				-1.3
1,894,348	+				+0.0
1,894,348	+				+2.6
1,894,348	+				-1.6
1,894,349	-				-0.4
1,894,349	-				+0.5
1,894,349	-				-0.1
1,894,470	+				-0.3
1,894,471	-				+0.4
1,894,475	+				+0.9
1,894,475	+				-0.4
1,894,475	+				-0.0
1,894,476	-				-0.4
1,894,476	-				+0.2
1,894,476	-				-1.4
1,894,476	-				+0.4
1,894,476	-				-1.8
1,894,478	+				-0.7
1,894,478	+				+0.2
1,894,478	+				+0.1
1,894,478	+				+0.3
1,894,479	-				+0.1
1,894,479	-				+1.0
1,894,479	-				+1.0
1,894,479	-				-0.1
1,894,479	-				+2.2
1,894,479	-				+0.1
1,894,574	+				-0.2
1,894,575	-				+0.4
1,894,693	+		Ga0059261_1784	0.12	-0.3
1,894,693	+		Ga0059261_1784	0.12	+0.5
1,894,693	+		Ga0059261_1784	0.12	+0.6
1,894,694	-		Ga0059261_1784	0.12	-0.2
1,894,694	-		Ga0059261_1784	0.12	+0.5
1,894,730	+		Ga0059261_1784	0.13	-0.1
1,894,730	+		Ga0059261_1784	0.13	+0.0
1,894,730	+		Ga0059261_1784	0.13	-0.3
1,894,730	+		Ga0059261_1784	0.13	-0.2
1,894,730	+		Ga0059261_1784	0.13	-0.1
1,894,731	-		Ga0059261_1784	0.13	-0.1
1,894,731	-		Ga0059261_1784	0.13	-0.1
1,894,731	-		Ga0059261_1784	0.13	-0.8
1,894,731	-		Ga0059261_1784	0.13	+0.1
1,894,803	+		Ga0059261_1784	0.16	+0.9
1,894,804	-		Ga0059261_1784	0.16	-0.2
1,894,804	-		Ga0059261_1784	0.16	-0.5
1,894,804	-		Ga0059261_1784	0.16	+0.6
1,894,804	-		Ga0059261_1784	0.16	+0.2
1,894,926	+		Ga0059261_1784	0.21	-1.3
1,894,926	+		Ga0059261_1784	0.21	+0.1
1,894,927	-		Ga0059261_1784	0.21	+0.4
1,894,941	-		Ga0059261_1784	0.22	-0.3
1,894,941	-		Ga0059261_1784	0.22	-1.3
1,894,952	+		Ga0059261_1784	0.22	+0.8
1,894,952	+		Ga0059261_1784	0.22	-0.3
1,894,952	+		Ga0059261_1784	0.22	+0.9
1,894,952	+		Ga0059261_1784	0.22	+0.6
1,894,952	+		Ga0059261_1784	0.22	+0.0
1,894,952	+		Ga0059261_1784	0.22	+0.2
1,894,953	-				-0.5
1,894,953	-		Ga0059261_1784	0.22	+1.0
1,894,953	-		Ga0059261_1784	0.22	-0.1
1,894,953	-		Ga0059261_1784	0.22	-0.1
1,894,953	-		Ga0059261_1784	0.22	+0.1
1,894,953	-		Ga0059261_1784	0.22	-0.2
1,894,953	-		Ga0059261_1784	0.22	-1.7