Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1047

Experiment: Tetracycline 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.002 mg/ml
1,079,488	+		Ga0059261_1044	0.82	+0.4
1,079,488	+		Ga0059261_1044	0.82	+0.4
1,079,489	-		Ga0059261_1044	0.82	-0.7
1,079,489	-		Ga0059261_1044	0.82	+0.1
1,079,489	-		Ga0059261_1044	0.82	-0.5
1,079,614	+				-0.5
1,079,614	+				-0.2
1,079,614	+				+0.9
1,079,614	+				+0.4
1,079,615	-				+0.0
1,079,615	-				+0.7
1,079,815	+		Ga0059261_1045	0.78	+0.2
1,079,895	+				+0.2
1,079,896	-				-0.5
1,080,236	+		Ga0059261_1046	0.60	-0.5
1,080,237	-		Ga0059261_1046	0.60	-1.0
1,080,297	+		Ga0059261_1046	0.70	-0.5
1,080,297	+		Ga0059261_1046	0.70	-0.3
1,080,297	+		Ga0059261_1046	0.70	-2.3
1,080,297	+		Ga0059261_1046	0.70	+0.0
1,080,298	-		Ga0059261_1046	0.71	-0.6
1,080,298	-		Ga0059261_1046	0.71	-0.2
1,080,318	+		Ga0059261_1046	0.74	+0.4
1,080,318	+		Ga0059261_1046	0.74	+0.2
1,080,318	+		Ga0059261_1046	0.74	+1.1
1,080,318	+		Ga0059261_1046	0.74	+0.2
1,080,319	-		Ga0059261_1046	0.74	+0.2
1,080,319	-		Ga0059261_1046	0.74	+0.5
1,080,319	-		Ga0059261_1046	0.74	+2.3
1,080,319	-		Ga0059261_1046	0.74	-1.7
1,080,320	+		Ga0059261_1046	0.74	-0.8
1,080,320	+		Ga0059261_1046	0.74	-1.0
1,080,321	-		Ga0059261_1046	0.74	-0.2
1,080,321	-		Ga0059261_1046	0.74	-0.1
1,080,321	-		Ga0059261_1046	0.74	-2.7
1,080,429	+				-0.2
1,080,532	+				+0.5
1,080,532	+				+1.1
1,080,533	-				+0.6
1,080,533	-				+1.5
1,080,533	-				+1.1
1,080,533	-				-0.9
1,080,533	-				-1.2
1,080,533	-				-0.2
1,080,968	+		Ga0059261_1047	0.68	-0.2
1,081,000	+		Ga0059261_1047	0.73	+0.3
1,081,000	+		Ga0059261_1047	0.73	+0.6
1,081,000	+		Ga0059261_1047	0.73	+0.3
1,081,000	+		Ga0059261_1047	0.73	+0.3
1,081,000	+		Ga0059261_1047	0.73	+1.5
1,081,000	+		Ga0059261_1047	0.73	-0.6
1,081,000	+		Ga0059261_1047	0.73	+0.5
1,081,001	-		Ga0059261_1047	0.73	-0.7
1,081,001	-		Ga0059261_1047	0.73	+1.6
1,081,001	-		Ga0059261_1047	0.73	+0.4
1,081,001	-		Ga0059261_1047	0.73	+0.4
1,081,139	+				-0.5
1,081,139	+				-0.1
1,081,139	+				+0.2
1,081,139	+				+0.1
1,081,139	+				-0.1
1,081,139	+				-1.0
1,081,139	+				-0.7
1,081,139	+				-0.5
1,081,139	+				-0.1
1,081,139	+				-0.3
1,081,140	-				+0.3
1,081,140	-				-0.3
1,081,140	-				+0.3
1,081,140	-				+1.1
1,081,140	-				-0.7
1,081,140	-				-0.2
1,081,140	-				-0.8
1,081,140	-				+0.7
1,081,312	+		Ga0059261_1048	0.15	-0.7
1,081,312	+		Ga0059261_1048	0.15	+1.9
1,081,312	+		Ga0059261_1048	0.15	+0.2
1,081,312	+		Ga0059261_1048	0.15	+0.4
1,081,312	+		Ga0059261_1048	0.15	-0.5
1,081,313	-		Ga0059261_1048	0.15	+0.2
1,081,313	-		Ga0059261_1048	0.15	+1.6
1,081,313	-		Ga0059261_1048	0.15	+1.6
1,081,313	-		Ga0059261_1048	0.15	+1.2
1,081,313	-		Ga0059261_1048	0.15	-0.3
1,081,313	-		Ga0059261_1048	0.15	+0.1
1,081,313	-		Ga0059261_1048	0.15	+0.7
1,081,313	-		Ga0059261_1048	0.15	+0.1
1,081,313	-		Ga0059261_1048	0.15	+0.1
1,081,619	+		Ga0059261_1048	0.55	-0.4
1,081,619	+		Ga0059261_1048	0.55	-0.3
1,081,619	+		Ga0059261_1048	0.55	-0.2
1,081,619	+		Ga0059261_1048	0.55	-1.4
1,081,619	+		Ga0059261_1048	0.55	-0.6
1,081,619	+		Ga0059261_1048	0.55	-0.2
1,081,619	+				+0.9
1,081,619	+		Ga0059261_1048	0.55	+0.6
1,081,619	+		Ga0059261_1048	0.55	+1.1
1,081,620	-		Ga0059261_1048	0.55	-0.5
1,081,620	-		Ga0059261_1048	0.55	+0.4
1,081,620	-		Ga0059261_1048	0.55	+0.3
1,081,620	-		Ga0059261_1048	0.55	-0.1
1,081,620	-		Ga0059261_1048	0.55	-0.7
1,081,620	-		Ga0059261_1048	0.55	+0.6
1,081,620	-		Ga0059261_1048	0.55	-1.0
1,081,620	-		Ga0059261_1048	0.55	-0.2
1,081,620	-		Ga0059261_1048	0.55	-0.7
1,081,620	-		Ga0059261_1048	0.55	-0.6
1,081,620	-		Ga0059261_1048	0.55	-0.8
1,081,623	+		Ga0059261_1048	0.56	+0.2
1,081,623	+		Ga0059261_1048	0.56	-0.7
1,081,623	+		Ga0059261_1048	0.56	+0.1
1,081,623	+		Ga0059261_1048	0.56	-0.3
1,081,623	+		Ga0059261_1048	0.56	-0.1
1,081,624	-		Ga0059261_1048	0.56	-0.1
1,081,624	-		Ga0059261_1048	0.56	+0.3
1,081,624	-		Ga0059261_1048	0.56	+1.4
1,081,624	-		Ga0059261_1048	0.56	+0.1
1,081,624	-		Ga0059261_1048	0.56	+0.2
1,081,744	+		Ga0059261_1048	0.71	+0.4
1,081,744	+		Ga0059261_1048	0.71	+0.2
1,081,745	-		Ga0059261_1048	0.72	+2.6
1,081,745	-		Ga0059261_1048	0.72	+0.0
1,081,745	-				-1.7
1,081,745	-		Ga0059261_1048	0.72	+0.1
1,081,966	+				+0.3
1,081,967	-				-0.6
1,081,972	+				+0.1
1,081,972	+				+0.9
1,081,973	-				+0.2
1,081,973	-				+0.1
1,081,973	-				+0.1
1,081,973	-				-0.4
1,081,995	+				+0.0
1,081,995	+				+0.9
1,082,150	+		Ga0059261_1049	0.24	-0.3
1,082,150	+		Ga0059261_1049	0.24	+1.5
1,082,151	-		Ga0059261_1049	0.25	+1.1
1,082,151	-		Ga0059261_1049	0.25	+0.9
1,082,151	-		Ga0059261_1049	0.25	+0.2