Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30700

Experiment: L-Tryptophan (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (N)
2,263,506	+		RR42_RS30695	0.11	+0.1
2,263,676	-		RR42_RS30695	0.28	-0.2
2,263,704	-		RR42_RS30695	0.31	-0.5
2,263,714	+		RR42_RS30695	0.32	+0.2
2,263,719	+		RR42_RS30695	0.33	+0.5
2,263,720	-		RR42_RS30695	0.33	+2.0
2,263,827	+		RR42_RS30695	0.44	+0.4
2,263,827	+		RR42_RS30695	0.44	+0.5
2,263,828	-		RR42_RS30695	0.44	-0.0
2,263,866	+		RR42_RS30695	0.48	-0.2
2,263,867	-		RR42_RS30695	0.48	+0.1
2,263,867	-		RR42_RS30695	0.48	-0.0
2,263,867	-		RR42_RS30695	0.48	-0.4
2,263,915	+		RR42_RS30695	0.53	+1.8
2,263,915	+		RR42_RS30695	0.53	+0.5
2,263,915	+		RR42_RS30695	0.53	-0.1
2,263,916	-		RR42_RS30695	0.53	-0.1
2,263,916	-		RR42_RS30695	0.53	+0.5
2,263,916	-		RR42_RS30695	0.53	-0.1
2,263,916	-		RR42_RS30695	0.53	-0.6
2,263,916	-		RR42_RS30695	0.53	-0.2
2,263,944	+		RR42_RS30695	0.56	-0.2
2,263,944	+		RR42_RS30695	0.56	+0.6
2,263,944	+		RR42_RS30695	0.56	-1.0
2,263,944	+		RR42_RS30695	0.56	-0.2
2,263,944	+		RR42_RS30695	0.56	-0.1
2,263,945	-		RR42_RS30695	0.56	-1.2
2,263,945	-		RR42_RS30695	0.56	-1.4
2,263,945	-		RR42_RS30695	0.56	+0.1
2,264,148	+		RR42_RS30695	0.77	-0.1
2,264,471	+				-0.4
2,264,471	+				+0.2
2,264,570	-		RR42_RS30700	0.17	-0.1
2,264,602	+		RR42_RS30700	0.21	-0.5
2,264,662	+		RR42_RS30700	0.27	+0.3
2,264,662	+		RR42_RS30700	0.27	+0.1
2,264,663	-		RR42_RS30700	0.27	-0.4
2,264,663	-		RR42_RS30700	0.27	-0.4
2,264,663	-		RR42_RS30700	0.27	+0.6
2,264,663	-		RR42_RS30700	0.27	-1.9
2,264,663	-		RR42_RS30700	0.27	-0.5
2,264,760	-		RR42_RS30700	0.38	+0.6
2,264,771	+		RR42_RS30700	0.39	+0.1
2,264,771	+		RR42_RS30700	0.39	-2.0
2,264,771	+		RR42_RS30700	0.39	+0.9
2,264,771	+		RR42_RS30700	0.39	+0.2
2,264,772	-		RR42_RS30700	0.39	+0.6
2,264,772	-		RR42_RS30700	0.39	+0.6
2,264,772	-		RR42_RS30700	0.39	-0.2
2,264,772	-		RR42_RS30700	0.39	-1.0
2,264,817	-		RR42_RS30700	0.44	-0.4
2,264,985	+		RR42_RS30700	0.62	+0.6
2,265,015	-		RR42_RS30700	0.65	+0.4
2,265,015	-		RR42_RS30700	0.65	-1.7
2,265,127	+		RR42_RS30700	0.77	+0.2
2,265,128	-		RR42_RS30700	0.77	-1.9
2,265,128	-		RR42_RS30700	0.77	-0.2
2,265,199	+		RR42_RS30700	0.84	+0.3
2,265,199	+		RR42_RS30700	0.84	+1.2
2,265,199	+		RR42_RS30700	0.84	+0.3
2,265,199	+		RR42_RS30700	0.84	+0.0
2,265,200	-		RR42_RS30700	0.85	+0.4
2,265,336	+				-0.1
2,265,336	+				+1.2
2,265,336	+				-0.4
2,265,337	-				-0.7
2,265,337	-				-0.0
2,265,337	-				-0.3
2,265,337	-				+1.1
2,265,349	+				-0.8
2,265,349	+				+0.1
2,265,349	+				+0.8
2,265,349	+				-0.5
2,265,349	+				-0.4
2,265,350	-				+0.4
2,265,350	-				+1.0
2,265,350	-				+0.2
2,265,353	+				+0.9
2,265,354	-				-1.3
2,265,354	-				+2.2
2,265,494	-				-1.4
2,265,494	-				+0.3
2,265,494	-				+0.7
2,265,563	-		RR42_RS30705	0.11	-0.2
2,265,650	+		RR42_RS30705	0.17	+0.2
2,265,650	+		RR42_RS30705	0.17	+1.0
2,265,650	+		RR42_RS30705	0.17	+0.6
2,265,651	-		RR42_RS30705	0.17	-0.1
2,265,651	-		RR42_RS30705	0.17	+0.5
2,265,673	+		RR42_RS30705	0.19	+0.4
2,265,673	+		RR42_RS30705	0.19	+0.3
2,265,673	+		RR42_RS30705	0.19	-0.2
2,265,673	+		RR42_RS30705	0.19	+0.2
2,265,673	+		RR42_RS30705	0.19	+0.4
2,265,674	-		RR42_RS30705	0.19	-0.1
2,265,674	-		RR42_RS30705	0.19	+0.1
2,265,674	-		RR42_RS30705	0.19	+0.3
2,265,674	-		RR42_RS30705	0.19	-1.6
2,265,674	-		RR42_RS30705	0.19	+1.1
2,265,718	+		RR42_RS30705	0.22	+0.8
2,265,752	+		RR42_RS30705	0.24	+1.4
2,265,752	+		RR42_RS30705	0.24	+0.7
2,265,752	+		RR42_RS30705	0.24	+0.4
2,265,752	+		RR42_RS30705	0.24	+0.5
2,265,754	+		RR42_RS30705	0.24	-0.7
2,265,754	+		RR42_RS30705	0.24	-0.1
2,265,754	+		RR42_RS30705	0.24	+0.2
2,265,754	+		RR42_RS30705	0.24	-0.5
2,265,754	+		RR42_RS30705	0.24	+0.1
2,265,754	+		RR42_RS30705	0.24	+0.5
2,265,755	-		RR42_RS30705	0.24	-0.5
2,265,755	-		RR42_RS30705	0.24	+0.6
2,265,755	-		RR42_RS30705	0.24	+0.8
2,265,755	-		RR42_RS30705	0.24	-0.3
2,265,755	-		RR42_RS30705	0.24	+1.2
2,265,755	-		RR42_RS30705	0.24	-0.9
2,265,769	+		RR42_RS30705	0.25	-0.2
2,265,769	+		RR42_RS30705	0.25	+0.1
2,265,769	+		RR42_RS30705	0.25	-0.0
2,265,769	+		RR42_RS30705	0.25	-0.3
2,265,769	+		RR42_RS30705	0.25	+0.3
2,265,769	+		RR42_RS30705	0.25	-0.2
2,265,770	-		RR42_RS30705	0.25	+1.5
2,266,018	+		RR42_RS30705	0.42	+0.8
2,266,018	+		RR42_RS30705	0.42	+1.6
2,266,019	-		RR42_RS30705	0.42	+0.4
2,266,019	-		RR42_RS30705	0.42	-0.2
2,266,049	-		RR42_RS30705	0.44	-0.4
2,266,049	-		RR42_RS30705	0.44	-1.0
2,266,126	+		RR42_RS30705	0.50	+0.5
2,266,126	+		RR42_RS30705	0.50	-0.5
2,266,126	+		RR42_RS30705	0.50	-0.7
2,266,132	+		RR42_RS30705	0.50	+1.5
2,266,132	+		RR42_RS30705	0.50	+0.7
2,266,132	+		RR42_RS30705	0.50	-0.4
2,266,132	+		RR42_RS30705	0.50	+0.3
2,266,132	+		RR42_RS30705	0.50	+0.1
2,266,133	-		RR42_RS30705	0.50	+0.6
2,266,133	-		RR42_RS30705	0.50	+0.3
2,266,133	-		RR42_RS30705	0.50	+0.5
2,266,133	-		RR42_RS30705	0.50	+1.1
2,266,133	-		RR42_RS30705	0.50	+0.0
2,266,133	-		RR42_RS30705	0.50	-0.0
2,266,133	-		RR42_RS30705	0.50	-0.0
2,266,133	-		RR42_RS30705	0.50	+0.5
2,266,133	-		RR42_RS30705	0.50	+0.7
2,266,243	+		RR42_RS30705	0.58	+1.0
2,266,243	+		RR42_RS30705	0.58	-0.2
2,266,243	+		RR42_RS30705	0.58	+0.6
2,266,244	-		RR42_RS30705	0.58	+0.6
2,266,244	-		RR42_RS30705	0.58	-1.7
2,266,244	-		RR42_RS30705	0.58	-0.7
2,266,244	-		RR42_RS30705	0.58	-0.0
2,266,244	-		RR42_RS30705	0.58	-0.4
2,266,244	-		RR42_RS30705	0.58	-0.7
2,266,244	-		RR42_RS30705	0.58	-0.2
2,266,244	-		RR42_RS30705	0.58	-0.0
2,266,244	-		RR42_RS30705	0.58	+0.3