Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS07710 and RR42_RS07715 are separated by 293 nucleotides
RR42_RS07710: RR42_RS07710 - chloroperoxidase, at 1,652,606 to 1,653,304
_RS07710
RR42_RS07715: RR42_RS07715 - hydrolase, at 1,653,598 to 1,654,224
_RS07715
Position (kb)
1653
1654
1655 Strain fitness (log2 ratio)
-2
-1
0
1 at 1652.807 kb on + strand, within RR42_RS07710 at 1652.809 kb on + strand, within RR42_RS07710 at 1652.809 kb on + strand, within RR42_RS07710 at 1652.809 kb on + strand, within RR42_RS07710 at 1652.809 kb on + strand, within RR42_RS07710 at 1652.810 kb on - strand, within RR42_RS07710 at 1652.810 kb on - strand, within RR42_RS07710 at 1652.810 kb on - strand, within RR42_RS07710 at 1653.000 kb on - strand, within RR42_RS07710 at 1653.152 kb on + strand, within RR42_RS07710 at 1653.153 kb on - strand, within RR42_RS07710 at 1653.218 kb on + strand, within RR42_RS07710 at 1653.302 kb on + strand at 1653.305 kb on + strand at 1653.433 kb on + strand at 1653.470 kb on + strand at 1653.470 kb on + strand at 1653.471 kb on - strand at 1653.608 kb on + strand at 1653.784 kb on + strand, within RR42_RS07715 at 1653.991 kb on + strand, within RR42_RS07715 at 1653.991 kb on + strand, within RR42_RS07715 at 1654.135 kb on + strand, within RR42_RS07715 at 1654.136 kb on - strand, within RR42_RS07715 at 1654.136 kb on - strand, within RR42_RS07715 at 1654.136 kb on - strand, within RR42_RS07715 at 1654.321 kb on + strand at 1654.340 kb on + strand at 1654.410 kb on + strand at 1654.481 kb on - strand at 1654.481 kb on - strand at 1654.580 kb on + strand at 1654.621 kb on - strand at 1654.703 kb on + strand at 1654.845 kb on + strand at 1654.874 kb on - strand at 1654.890 kb on + strand at 1654.890 kb on + strand at 1654.890 kb on + strand at 1654.891 kb on - strand at 1654.934 kb on + strand at 1654.934 kb on + strand at 1654.971 kb on - strand at 1654.971 kb on - strand at 1654.971 kb on - strand at 1654.994 kb on + strand at 1655.073 kb on - strand at 1655.186 kb on + strand at 1655.187 kb on - strand at 1655.205 kb on + strand at 1655.205 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 1,652,807 + RR42_RS07710 0.29 +1.3 1,652,809 + RR42_RS07710 0.29 -0.4 1,652,809 + RR42_RS07710 0.29 -0.1 1,652,809 + RR42_RS07710 0.29 -0.7 1,652,809 + RR42_RS07710 0.29 -2.4 1,652,810 - RR42_RS07710 0.29 +0.9 1,652,810 - RR42_RS07710 0.29 +0.2 1,652,810 - RR42_RS07710 0.29 -1.3 1,653,000 - RR42_RS07710 0.56 -2.3 1,653,152 + RR42_RS07710 0.78 -0.7 1,653,153 - RR42_RS07710 0.78 +0.7 1,653,218 + RR42_RS07710 0.88 +0.5 1,653,302 + +0.2 1,653,305 + +0.3 1,653,433 + +1.6 1,653,470 + -0.1 1,653,470 + -0.3 1,653,471 - -0.3 1,653,608 + -0.2 1,653,784 + RR42_RS07715 0.30 +0.7 1,653,991 + RR42_RS07715 0.63 -0.4 1,653,991 + RR42_RS07715 0.63 -1.0 1,654,135 + RR42_RS07715 0.86 -0.6 1,654,136 - RR42_RS07715 0.86 -0.2 1,654,136 - RR42_RS07715 0.86 -0.5 1,654,136 - RR42_RS07715 0.86 -0.9 1,654,321 + +0.6 1,654,340 + +0.7 1,654,410 + -0.3 1,654,481 - -0.7 1,654,481 - -0.4 1,654,580 + +0.2 1,654,621 - +0.3 1,654,703 + -0.7 1,654,845 + -2.3 1,654,874 - +0.7 1,654,890 + +0.3 1,654,890 + +0.3 1,654,890 + -0.8 1,654,891 - +0.1 1,654,934 + +0.1 1,654,934 + +0.2 1,654,971 - -0.6 1,654,971 - +0.2 1,654,971 - +0.7 1,654,994 + -0.6 1,655,073 - -0.6 1,655,186 + -0.0 1,655,187 - -0.7 1,655,205 + -0.5 1,655,205 + -0.8
Or see this region's nucleotide sequence