Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08270

Experiment: H2 McCas, 5g/L bicarb, 40 psi H2CO2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	H2 McCas, 5g/L bicarb, 40 psi H2CO2
1,521,553	+		MMJJ_RS08265	0.18	+1.6
1,521,553	+		MMJJ_RS08265	0.18	+2.5
1,521,570	-		MMJJ_RS08265	0.20	+1.9
1,521,618	-		MMJJ_RS08265	0.24	+4.5
1,521,619	+		MMJJ_RS08265	0.24	+1.7
1,521,619	+		MMJJ_RS08265	0.24	+2.7
1,521,652	+		MMJJ_RS08265	0.28	+3.4
1,521,652	+		MMJJ_RS08265	0.28	+2.2
1,521,713	+		MMJJ_RS08265	0.33	+2.5
1,521,729	-		MMJJ_RS08265	0.35	+2.3
1,521,729	-		MMJJ_RS08265	0.35	-0.6
1,521,729	-		MMJJ_RS08265	0.35	+2.3
1,521,729	-		MMJJ_RS08265	0.35	+2.3
1,521,729	-		MMJJ_RS08265	0.35	+0.4
1,521,730	+		MMJJ_RS08265	0.35	+2.7
1,521,730	+		MMJJ_RS08265	0.35	+1.9
1,521,730	+		MMJJ_RS08265	0.35	+1.6
1,521,730	+		MMJJ_RS08265	0.35	+1.2
1,521,730	+		MMJJ_RS08265	0.35	+2.8
1,521,731	-		MMJJ_RS08265	0.35	+2.6
1,521,731	-		MMJJ_RS08265	0.35	+0.5
1,521,736	-		MMJJ_RS08265	0.36	+1.5
1,521,741	+		MMJJ_RS08265	0.36	+0.4
1,521,756	-		MMJJ_RS08265	0.38	+2.2
1,521,757	+		MMJJ_RS08265	0.38	+1.2
1,521,759	-		MMJJ_RS08265	0.38	+1.8
1,521,831	-		MMJJ_RS08265	0.45	-1.2
1,521,831	-		MMJJ_RS08265	0.45	+2.1
1,521,831	-		MMJJ_RS08265	0.45	+1.9
1,521,839	-		MMJJ_RS08265	0.45	+2.8
1,521,840	+		MMJJ_RS08265	0.46	+2.6
1,521,858	-		MMJJ_RS08265	0.47	+1.2
1,521,858	-		MMJJ_RS08265	0.47	+1.8
1,521,866	-		MMJJ_RS08265	0.48	+3.0
1,521,878	-		MMJJ_RS08265	0.49	+0.9
1,521,891	-		MMJJ_RS08265	0.50	+1.5
1,521,936	-		MMJJ_RS08265	0.55	-1.4
1,521,937	+		MMJJ_RS08265	0.55	+2.1
1,521,981	-		MMJJ_RS08265	0.59	+3.9
1,522,066	+		MMJJ_RS08265	0.67	+3.8
1,522,112	-		MMJJ_RS08265	0.72	+1.9
1,522,112	-		MMJJ_RS08265	0.72	+1.6
1,522,112	-		MMJJ_RS08265	0.72	+0.8
1,522,112	-		MMJJ_RS08265	0.72	+2.2
1,522,112	-		MMJJ_RS08265	0.72	+1.7
1,522,113	+		MMJJ_RS08265	0.72	+1.1
1,522,113	+		MMJJ_RS08265	0.72	+2.1
1,522,115	+		MMJJ_RS08265	0.72	+2.0
1,522,137	-		MMJJ_RS08265	0.74	+2.0
1,522,226	-		MMJJ_RS08265	0.82	+2.3
1,522,226	-		MMJJ_RS08265	0.82	+1.7
1,522,227	+		MMJJ_RS08265	0.83	+0.6
1,522,257	-		MMJJ_RS08265	0.85	+2.3
1,522,258	+		MMJJ_RS08265	0.85	+1.2
1,522,269	-		MMJJ_RS08265	0.87	+3.6
1,522,316	+				+1.7
1,522,339	+				-2.6
1,522,347	-				+2.0
1,522,376	-				+2.0
1,522,376	-				+1.0
1,522,391	-				+2.5
1,522,391	-				+2.4
1,522,391	-				+1.6
1,522,392	+				-0.9
1,522,394	-				+1.7
1,522,429	-				+2.4
1,522,459	-				+2.5
1,522,462	+				+2.8
1,522,465	-				+1.5
1,522,465	-				+1.8
1,522,466	+				+2.3
1,522,476	-				-1.2
1,522,477	+				+0.4
1,522,506	-				-1.5
1,522,520	+				-1.9
1,522,520	+				-0.2
1,522,539	+				+1.1
1,522,563	+				+2.3
1,522,598	+				+3.5
1,522,599	-				+1.0
1,522,600	+				+2.1
1,522,600	+				+3.0
1,522,626	-				-2.3
1,522,627	+				-0.6
1,522,648	-		MMJJ_RS08270	0.12	+1.8
1,522,649	+		MMJJ_RS08270	0.12	+2.5
1,522,649	+		MMJJ_RS08270	0.12	+0.1
1,522,651	+		MMJJ_RS08270	0.12	+1.1
1,522,688	-		MMJJ_RS08270	0.15	+4.1
1,522,730	+		MMJJ_RS08270	0.19	-0.0
1,522,733	-		MMJJ_RS08270	0.19	-0.2
1,522,779	-		MMJJ_RS08270	0.23	+1.2
1,522,780	+		MMJJ_RS08270	0.23	+1.4
1,522,791	-		MMJJ_RS08270	0.24	+1.2
1,522,791	-		MMJJ_RS08270	0.24	+2.2
1,522,791	-		MMJJ_RS08270	0.24	+1.1
1,522,791	-		MMJJ_RS08270	0.24	+1.7
1,522,794	-		MMJJ_RS08270	0.24	+2.2
1,522,794	-		MMJJ_RS08270	0.24	+2.0
1,522,821	-		MMJJ_RS08270	0.27	+3.2
1,522,821	-		MMJJ_RS08270	0.27	+2.4
1,522,821	-		MMJJ_RS08270	0.27	+2.7
1,522,822	+		MMJJ_RS08270	0.27	+0.9
1,522,822	+		MMJJ_RS08270	0.27	+1.7
1,522,822	+		MMJJ_RS08270	0.27	+1.1
1,522,823	-		MMJJ_RS08270	0.27	-0.2
1,522,823	-		MMJJ_RS08270	0.27	+2.6
1,522,823	-		MMJJ_RS08270	0.27	+1.8
1,522,823	-		MMJJ_RS08270	0.27	+1.2
1,522,823	-		MMJJ_RS08270	0.27	+1.0
1,522,823	-		MMJJ_RS08270	0.27	+1.6
1,522,824	+		MMJJ_RS08270	0.27	+2.6
1,522,824	+		MMJJ_RS08270	0.27	-0.2
1,522,824	+		MMJJ_RS08270	0.27	+0.7
1,522,824	+		MMJJ_RS08270	0.27	+0.9
1,522,824	+		MMJJ_RS08270	0.27	+2.1
1,522,825	-		MMJJ_RS08270	0.27	+1.2
1,522,856	-		MMJJ_RS08270	0.30	+1.9
1,522,856	-		MMJJ_RS08270	0.30	+1.3
1,522,860	-		MMJJ_RS08270	0.30	+1.7
1,522,861	+		MMJJ_RS08270	0.30	+1.4
1,522,899	-		MMJJ_RS08270	0.34	+2.7
1,522,899	-		MMJJ_RS08270	0.34	+0.4
1,522,900	+		MMJJ_RS08270	0.34	+1.7
1,522,991	+		MMJJ_RS08270	0.42	+2.4
1,523,057	-		MMJJ_RS08270	0.48	+1.6
1,523,058	+		MMJJ_RS08270	0.48	+1.2
1,523,070	-		MMJJ_RS08270	0.49	+2.5
1,523,119	+		MMJJ_RS08270	0.53	-0.4
1,523,176	+		MMJJ_RS08270	0.58	+1.1
1,523,245	+		MMJJ_RS08270	0.64	+2.9
1,523,245	+		MMJJ_RS08270	0.64	+2.7
1,523,248	+		MMJJ_RS08270	0.65	+0.8
1,523,248	+		MMJJ_RS08270	0.65	+0.5
1,523,259	-		MMJJ_RS08270	0.66	+1.6
1,523,260	+		MMJJ_RS08270	0.66	+2.4
1,523,282	-		MMJJ_RS08270	0.68	+1.4
1,523,291	-		MMJJ_RS08270	0.69	+2.1
1,523,301	+		MMJJ_RS08270	0.69	+0.9
1,523,342	+		MMJJ_RS08270	0.73	+0.8
1,523,396	-		MMJJ_RS08270	0.78	+1.7
1,523,396	-		MMJJ_RS08270	0.78	-0.3
1,523,399	+		MMJJ_RS08270	0.78	-0.0
1,523,409	-		MMJJ_RS08270	0.79	+0.9
1,523,409	-		MMJJ_RS08270	0.79	+1.1
1,523,409	-		MMJJ_RS08270	0.79	+1.0
1,523,410	+		MMJJ_RS08270	0.79	+1.4
1,523,410	+		MMJJ_RS08270	0.79	+2.1
1,523,460	-		MMJJ_RS08270	0.84	+2.7
1,523,525	-		MMJJ_RS08270	0.89	+0.7
1,523,525	-		MMJJ_RS08270	0.89	+2.1
1,523,525	-		MMJJ_RS08270	0.89	+0.1
1,523,525	-		MMJJ_RS08270	0.89	+1.8
1,523,525	-		MMJJ_RS08270	0.89	+1.2
1,523,526	+		MMJJ_RS08270	0.89	+2.4
1,523,526	+		MMJJ_RS08270	0.89	+0.9
1,523,526	+		MMJJ_RS08270	0.89	+0.5
1,523,526	+		MMJJ_RS08270	0.89	+2.2
1,523,526	+		MMJJ_RS08270	0.89	-0.4
1,523,536	+				+1.7
1,523,547	+				+0.2
1,523,547	+				-2.1
1,523,576	-				+2.2
1,523,576	-				+1.7
1,523,577	+				+0.8
1,523,577	+				+1.2
1,523,618	-				+0.8
1,523,628	+				+3.1
1,523,628	+				+1.4
1,523,628	+				+1.9
1,523,628	+				+1.1
1,523,641	-				+1.7
1,523,642	+				+1.4
1,523,646	-				+1.5
1,523,646	-				+2.8
1,523,648	-				+0.3
1,523,649	+				+0.3
1,523,649	+				-4.1
1,523,691	+				+1.9
1,523,745	-				-0.5
1,523,761	-				-0.5
1,523,762	+				+0.9
1,523,762	+				+1.0
1,523,794	-				+0.4
1,523,795	+				+1.0
1,523,840	-				+0.3
1,523,841	+				+1.7
1,523,869	-				+0.9
1,523,869	-				-1.6
1,523,869	-				-2.3
1,523,870	+				-1.4
1,523,899	+		MMJJ_RS08275	0.10	-1.2
1,523,921	+		MMJJ_RS08275	0.12	+0.8
1,523,923	-		MMJJ_RS08275	0.12	-0.0
1,523,924	+		MMJJ_RS08275	0.12	+0.1
1,523,924	+		MMJJ_RS08275	0.12	-0.5
1,523,924	+		MMJJ_RS08275	0.12	-1.8
1,523,935	+				-0.2
1,523,935	+		MMJJ_RS08275	0.13	-0.7
1,523,935	+		MMJJ_RS08275	0.13	-1.2
1,523,935	+		MMJJ_RS08275	0.13	+2.1
1,523,936	-		MMJJ_RS08275	0.13	-2.1
1,523,936	-		MMJJ_RS08275	0.13	+1.2
1,523,936	-		MMJJ_RS08275	0.13	+0.0
1,523,936	-		MMJJ_RS08275	0.13	+0.4
1,523,936	-		MMJJ_RS08275	0.13	-0.7
1,523,937	+		MMJJ_RS08275	0.14	-0.2
1,523,937	+		MMJJ_RS08275	0.14	+0.5
1,523,937	+		MMJJ_RS08275	0.14	-1.6
1,523,937	+		MMJJ_RS08275	0.14	+0.6
1,523,937	+		MMJJ_RS08275	0.14	+0.3
1,523,937	+		MMJJ_RS08275	0.14	+1.3
1,523,937	+		MMJJ_RS08275	0.14	+3.0
1,523,937	+		MMJJ_RS08275	0.14	+1.1
1,523,937	+		MMJJ_RS08275	0.14	+2.6
1,523,940	+		MMJJ_RS08275	0.14	-0.6
1,523,940	+		MMJJ_RS08275	0.14	+0.2
1,523,944	+		MMJJ_RS08275	0.14	+0.4
1,523,944	+		MMJJ_RS08275	0.14	-1.6
1,523,953	-		MMJJ_RS08275	0.15	+0.5
1,523,963	-		MMJJ_RS08275	0.16	+1.3
1,523,975	-		MMJJ_RS08275	0.17	+0.4
1,523,975	-		MMJJ_RS08275	0.17	-2.3
1,523,975	-		MMJJ_RS08275	0.17	-0.6
1,523,976	+		MMJJ_RS08275	0.17	+0.4
1,523,976	+		MMJJ_RS08275	0.17	+2.3
1,523,985	+		MMJJ_RS08275	0.18	+0.8
1,523,988	-		MMJJ_RS08275	0.18	+2.1
1,523,988	-		MMJJ_RS08275	0.18	+3.2
1,523,988	-		MMJJ_RS08275	0.18	+1.9
1,523,989	+		MMJJ_RS08275	0.18	+0.0
1,523,989	+		MMJJ_RS08275	0.18	+1.1
1,523,989	+		MMJJ_RS08275	0.18	-2.3
1,523,989	+		MMJJ_RS08275	0.18	+2.8
1,523,989	+		MMJJ_RS08275	0.18	-3.0
1,523,989	+		MMJJ_RS08275	0.18	+1.3
1,523,990	-		MMJJ_RS08275	0.18	+1.9
1,523,990	-		MMJJ_RS08275	0.18	-0.2
1,523,990	-		MMJJ_RS08275	0.18	+1.9
1,523,990	-		MMJJ_RS08275	0.18	-1.2
1,523,990	-		MMJJ_RS08275	0.18	+0.0
1,523,991	+		MMJJ_RS08275	0.18	+1.0
1,523,991	+		MMJJ_RS08275	0.18	-0.2
1,523,991	+		MMJJ_RS08275	0.18	-2.0
1,523,991	+		MMJJ_RS08275	0.18	+0.2
1,523,991	+		MMJJ_RS08275	0.18	+0.5
1,523,991	+		MMJJ_RS08275	0.18	-0.2
1,523,992	-		MMJJ_RS08275	0.18	-0.9
1,523,992	-		MMJJ_RS08275	0.18	+0.6
1,523,992	-		MMJJ_RS08275	0.18	-1.8
1,523,992	-		MMJJ_RS08275	0.18	+1.5
1,523,992	-		MMJJ_RS08275	0.18	+1.9
1,523,992	-		MMJJ_RS08275	0.18	-0.5
1,523,993	+		MMJJ_RS08275	0.18	+0.6
1,523,993	+		MMJJ_RS08275	0.18	+0.5
1,523,993	+		MMJJ_RS08275	0.18	+0.9
1,523,993	+		MMJJ_RS08275	0.18	-1.3
1,523,995	-		MMJJ_RS08275	0.19	+0.0
1,523,996	+		MMJJ_RS08275	0.19	-1.7
1,523,996	+		MMJJ_RS08275	0.19	-0.7
1,523,999	-		MMJJ_RS08275	0.19	-1.9
1,523,999	-		MMJJ_RS08275	0.19	-0.5
1,523,999	-		MMJJ_RS08275	0.19	-3.4
1,523,999	-		MMJJ_RS08275	0.19	+1.3
1,524,035	-		MMJJ_RS08275	0.22	-1.2
1,524,035	-		MMJJ_RS08275	0.22	-0.1
1,524,038	-		MMJJ_RS08275	0.22	+0.7
1,524,039	+		MMJJ_RS08275	0.22	-0.1
1,524,067	-		MMJJ_RS08275	0.25	-1.4
1,524,078	-		MMJJ_RS08275	0.26	+0.6
1,524,078	-		MMJJ_RS08275	0.26	-2.1
1,524,078	-		MMJJ_RS08275	0.26	-0.7
1,524,079	+		MMJJ_RS08275	0.26	-1.7
1,524,079	+		MMJJ_RS08275	0.26	-2.1
1,524,079	+				-0.2
1,524,079	+		MMJJ_RS08275	0.26	+1.7
1,524,091	+		MMJJ_RS08275	0.27	-0.6
1,524,103	-		MMJJ_RS08275	0.28	-0.7
1,524,103	-		MMJJ_RS08275	0.28	-0.1
1,524,103	-		MMJJ_RS08275	0.28	+1.3
1,524,103	-		MMJJ_RS08275	0.28	-2.6
1,524,104	+		MMJJ_RS08275	0.28	-2.6
1,524,104	+		MMJJ_RS08275	0.28	+1.4
1,524,122	+		MMJJ_RS08275	0.30	+1.1
1,524,123	-		MMJJ_RS08275	0.30	+2.7
1,524,141	-		MMJJ_RS08275	0.31	-0.2
1,524,141	-		MMJJ_RS08275	0.31	-1.8
1,524,141	-		MMJJ_RS08275	0.31	-3.5
1,524,141	-		MMJJ_RS08275	0.31	-0.7
1,524,141	-		MMJJ_RS08275	0.31	+1.5
1,524,142	+		MMJJ_RS08275	0.31	-1.6
1,524,142	+		MMJJ_RS08275	0.31	+1.5
1,524,142	+		MMJJ_RS08275	0.31	+1.7
1,524,142	+		MMJJ_RS08275	0.31	+1.1
1,524,142	+		MMJJ_RS08275	0.31	+0.2
1,524,143	-		MMJJ_RS08275	0.32	+1.7
1,524,143	-		MMJJ_RS08275	0.32	+1.1
1,524,143	-		MMJJ_RS08275	0.32	+0.5
1,524,143	-		MMJJ_RS08275	0.32	-5.5
1,524,144	+		MMJJ_RS08275	0.32	+0.2
1,524,144	+		MMJJ_RS08275	0.32	-1.6
1,524,144	+		MMJJ_RS08275	0.32	+1.0
1,524,144	+		MMJJ_RS08275	0.32	+1.5
1,524,144	+		MMJJ_RS08275	0.32	+0.3
1,524,145	-		MMJJ_RS08275	0.32	+0.6
1,524,145	-		MMJJ_RS08275	0.32	-3.3
1,524,145	-		MMJJ_RS08275	0.32	-1.2
1,524,146	+		MMJJ_RS08275	0.32	-1.3
1,524,146	+		MMJJ_RS08275	0.32	-0.2
1,524,146	+		MMJJ_RS08275	0.32	+0.8
1,524,212	+		MMJJ_RS08275	0.38	+0.9
1,524,212	+		MMJJ_RS08275	0.38	-0.9
1,524,222	-		MMJJ_RS08275	0.38	+0.2
1,524,222	-		MMJJ_RS08275	0.38	-0.9
1,524,223	+		MMJJ_RS08275	0.39	+0.8
1,524,229	-		MMJJ_RS08275	0.39	-0.1
1,524,230	+		MMJJ_RS08275	0.39	+1.2
1,524,230	+		MMJJ_RS08275	0.39	-0.4
1,524,269	-		MMJJ_RS08275	0.43	-1.8
1,524,269	-		MMJJ_RS08275	0.43	-3.1
1,524,269	-		MMJJ_RS08275	0.43	+1.7
1,524,269	-		MMJJ_RS08275	0.43	-3.6
1,524,269	-		MMJJ_RS08275	0.43	+0.1
1,524,269	-		MMJJ_RS08275	0.43	-0.2
1,524,270	+		MMJJ_RS08275	0.43	-3.5
1,524,270	+		MMJJ_RS08275	0.43	-0.9
1,524,270	+		MMJJ_RS08275	0.43	+1.2
1,524,270	+		MMJJ_RS08275	0.43	+0.9
1,524,271	-		MMJJ_RS08275	0.43	-3.5
1,524,271	-		MMJJ_RS08275	0.43	+0.6
1,524,271	-		MMJJ_RS08275	0.43	+1.4
1,524,271	-		MMJJ_RS08275	0.43	-2.9
1,524,271	-		MMJJ_RS08275	0.43	+0.4
1,524,271	-		MMJJ_RS08275	0.43	+1.1
1,524,271	-		MMJJ_RS08275	0.43	+0.5
1,524,271	-		MMJJ_RS08275	0.43	-0.4
1,524,272	+		MMJJ_RS08275	0.43	-2.1
1,524,272	+		MMJJ_RS08275	0.43	-0.9
1,524,272	+		MMJJ_RS08275	0.43	-1.4
1,524,272	+		MMJJ_RS08275	0.43	-3.1
1,524,272	+		MMJJ_RS08275	0.43	+0.9
1,524,272	+		MMJJ_RS08275	0.43	-0.0
1,524,272	+		MMJJ_RS08275	0.43	+1.1
1,524,272	+		MMJJ_RS08275	0.43	-3.6
1,524,310	+		MMJJ_RS08275	0.46	+0.7
1,524,318	-		MMJJ_RS08275	0.47	+0.2
1,524,319	+		MMJJ_RS08275	0.47	+0.9
1,524,350	+		MMJJ_RS08275	0.50	+0.7
1,524,373	+		MMJJ_RS08275	0.52	+0.4
1,524,391	-		MMJJ_RS08275	0.53	-0.4
1,524,391	-		MMJJ_RS08275	0.53	+0.5
1,524,391	-		MMJJ_RS08275	0.53	+0.7
1,524,392	+				-0.6
1,524,396	-		MMJJ_RS08275	0.54	-2.3
1,524,443	-		MMJJ_RS08275	0.58	+0.2
1,524,444	+		MMJJ_RS08275	0.58	-0.3
1,524,484	+		MMJJ_RS08275	0.61	+0.1
1,524,521	+		MMJJ_RS08275	0.65	+1.3
1,524,544	-		MMJJ_RS08275	0.67	-0.2
1,524,547	+		MMJJ_RS08275	0.67	+2.2
1,524,559	-		MMJJ_RS08275	0.68	+0.3
1,524,559	-		MMJJ_RS08275	0.68	-0.7
1,524,580	+		MMJJ_RS08275	0.70	+1.5
1,524,588	-		MMJJ_RS08275	0.71	+0.1
1,524,588	-		MMJJ_RS08275	0.71	+0.4
1,524,588	-		MMJJ_RS08275	0.71	-0.0
1,524,588	-		MMJJ_RS08275	0.71	+0.1
1,524,592	-		MMJJ_RS08275	0.71	+0.1
1,524,592	-		MMJJ_RS08275	0.71	+0.9
1,524,593	+		MMJJ_RS08275	0.71	+0.4
1,524,626	-		MMJJ_RS08275	0.74	+0.3
1,524,627	+		MMJJ_RS08275	0.74	+1.1
1,524,644	-		MMJJ_RS08275	0.75	+0.8