Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3990

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,103,425	+				+0.6
4,103,425	+				+0.2
4,103,425	+				+0.3
4,103,425	+				-0.3
4,103,425	+				-0.5
4,103,425	+				+1.2
4,103,426	-				+1.1
4,103,426	-				+0.1
4,103,426	-				-1.2
4,103,426	-				+0.7
4,103,426	-				+0.1
4,103,426	-				-1.1
4,103,426	-				-1.1
4,103,434	+				-0.3
4,103,435	-				+0.5
4,103,597	+		Ga0059261_3989	0.18	-1.9
4,103,597	+		Ga0059261_3989	0.18	-0.8
4,103,598	-		Ga0059261_3989	0.19	+0.5
4,103,598	-		Ga0059261_3989	0.19	+2.1
4,103,867	+		Ga0059261_3989	0.45	+1.2
4,103,867	+		Ga0059261_3989	0.45	-0.5
4,103,867	+		Ga0059261_3989	0.45	+0.1
4,103,867	+		Ga0059261_3989	0.45	+0.5
4,103,867	+		Ga0059261_3989	0.45	+0.0
4,103,867	+		Ga0059261_3989	0.45	-1.4
4,103,868	-		Ga0059261_3989	0.45	+0.2
4,103,868	-		Ga0059261_3989	0.45	+0.9
4,103,870	+		Ga0059261_3989	0.46	-0.0
4,103,870	+		Ga0059261_3989	0.46	-0.3
4,103,870	+		Ga0059261_3989	0.46	+0.5
4,103,870	+		Ga0059261_3989	0.46	-1.3
4,103,870	+		Ga0059261_3989	0.46	+0.1
4,103,870	+		Ga0059261_3989	0.46	-1.6
4,103,870	+		Ga0059261_3989	0.46	+0.3
4,103,870	+		Ga0059261_3989	0.46	+0.8
4,103,870	+		Ga0059261_3989	0.46	-0.3
4,103,870	+		Ga0059261_3989	0.46	-0.0
4,103,870	+		Ga0059261_3989	0.46	-0.4
4,103,870	+		Ga0059261_3989	0.46	+0.2
4,103,870	+		Ga0059261_3989	0.46	+0.3
4,103,871	-		Ga0059261_3989	0.46	+0.6
4,103,871	-		Ga0059261_3989	0.46	+0.3
4,103,872	+		Ga0059261_3989	0.46	+0.7
4,103,872	+		Ga0059261_3989	0.46	+0.6
4,103,872	+		Ga0059261_3989	0.46	-0.0
4,103,872	+		Ga0059261_3989	0.46	-0.1
4,103,873	-		Ga0059261_3989	0.46	-0.8
4,103,873	-		Ga0059261_3989	0.46	-0.6
4,103,873	-		Ga0059261_3989	0.46	+0.5
4,103,873	-		Ga0059261_3989	0.46	-0.6
4,103,873	-		Ga0059261_3989	0.46	-0.2
4,103,873	-		Ga0059261_3989	0.46	-0.5
4,103,881	+		Ga0059261_3989	0.47	-0.7
4,103,903	+		Ga0059261_3989	0.49	-0.2
4,103,903	+				-0.1
4,103,904	-		Ga0059261_3989	0.49	+0.3
4,103,948	-		Ga0059261_3989	0.53	+0.7
4,103,948	-		Ga0059261_3989	0.53	-0.7
4,104,037	+		Ga0059261_3989	0.62	+0.7
4,104,038	-		Ga0059261_3989	0.62	+0.5
4,104,478	+		Ga0059261_3990	0.25	+0.5
4,104,479	-		Ga0059261_3990	0.25	+0.5
4,104,513	+		Ga0059261_3990	0.39	+0.4
4,104,513	+		Ga0059261_3990	0.39	+0.8
4,104,514	-		Ga0059261_3990	0.39	+0.5
4,104,514	-		Ga0059261_3990	0.39	-0.1
4,104,514	-		Ga0059261_3990	0.39	+0.4
4,104,514	-		Ga0059261_3990	0.39	-0.1
4,104,578	+		Ga0059261_3990	0.65	-0.0
4,104,578	+		Ga0059261_3990	0.65	+0.4
4,104,578	+		Ga0059261_3990	0.65	+0.8
4,104,578	+		Ga0059261_3990	0.65	+0.4
4,104,579	-				+0.3
4,104,583	+		Ga0059261_3990	0.67	+0.2
4,104,584	-		Ga0059261_3990	0.67	-0.3
4,104,623	-		Ga0059261_3990	0.83	-0.0
4,104,761	+		Ga0059261_3991	0.12	+0.2
4,104,761	+		Ga0059261_3991	0.12	-0.7
4,104,761	+		Ga0059261_3991	0.12	-1.6
4,104,761	+		Ga0059261_3991	0.12	-1.4
4,104,761	+		Ga0059261_3991	0.12	+0.3
4,104,761	+		Ga0059261_3991	0.12	+0.6
4,104,762	-		Ga0059261_3991	0.12	+0.5
4,104,762	-		Ga0059261_3991	0.12	+0.5
4,104,762	-		Ga0059261_3991	0.12	+0.3
4,104,762	-		Ga0059261_3991	0.12	+0.2
4,104,762	-		Ga0059261_3991	0.12	+0.5
4,104,762	-		Ga0059261_3991	0.12	-1.3
4,104,855	+		Ga0059261_3991	0.24	-0.4
4,104,855	+		Ga0059261_3991	0.24	-0.8
4,104,855	+		Ga0059261_3991	0.24	+0.3
4,104,855	+		Ga0059261_3991	0.24	+0.3
4,104,855	+		Ga0059261_3991	0.24	+0.4
4,104,855	+		Ga0059261_3991	0.24	-0.1
4,104,856	-		Ga0059261_3991	0.24	+0.8
4,104,856	-		Ga0059261_3991	0.24	+1.4
4,104,856	-		Ga0059261_3991	0.24	-0.1
4,104,856	-		Ga0059261_3991	0.24	-1.4
4,104,893	+		Ga0059261_3991	0.28	-0.3
4,104,893	+		Ga0059261_3991	0.28	-0.3
4,104,893	+		Ga0059261_3991	0.28	-0.5
4,104,894	-		Ga0059261_3991	0.28	-0.7
4,104,894	-		Ga0059261_3991	0.28	+0.7
4,104,894	-		Ga0059261_3991	0.28	-2.7
4,105,026	+		Ga0059261_3991	0.44	+0.3
4,105,027	-		Ga0059261_3991	0.45	-1.6
4,105,377	+		Ga0059261_3991	0.88	-1.3
4,105,377	+		Ga0059261_3991	0.88	-1.3
4,105,377	+		Ga0059261_3991	0.88	-1.3
4,105,377	+		Ga0059261_3991	0.88	-0.3
4,105,377	+		Ga0059261_3991	0.88	-0.7
4,105,377	+		Ga0059261_3991	0.88	-0.3
4,105,377	+		Ga0059261_3991	0.88	+0.5
4,105,378	-		Ga0059261_3991	0.88	+0.3
4,105,378	-		Ga0059261_3991	0.88	+0.3
4,105,378	-		Ga0059261_3991	0.88	+0.4
4,105,378	-		Ga0059261_3991	0.88	-0.7
4,105,378	-		Ga0059261_3991	0.88	+0.5
4,105,378	-		Ga0059261_3991	0.88	-0.1
4,105,378	-		Ga0059261_3991	0.88	-0.1
4,105,378	-		Ga0059261_3991	0.88	-0.3
4,105,413	+				+0.1
4,105,413	+				-1.6
4,105,413	+				+0.0
4,105,414	-				-0.3
4,105,414	-				+0.4
4,105,414	-				+0.3
4,105,414	-				-0.1
4,105,414	-				-0.9
4,105,414	-				-0.7
4,105,612	+		Ga0059261_3992	0.34	+0.2
4,105,613	-		Ga0059261_3992	0.34	-0.6