Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3936

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,050,955	+		Ga0059261_3935	0.17	+0.3
4,050,955	+		Ga0059261_3935	0.17	+0.3
4,050,955	+		Ga0059261_3935	0.17	-0.8
4,050,956	-		Ga0059261_3935	0.17	-0.4
4,050,956	-		Ga0059261_3935	0.17	+0.1
4,050,956	-		Ga0059261_3935	0.17	-0.5
4,051,007	+		Ga0059261_3935	0.22	-1.0
4,051,007	+		Ga0059261_3935	0.22	-0.2
4,051,007	+		Ga0059261_3935	0.22	+0.3
4,051,318	+		Ga0059261_3935	0.48	+0.0
4,051,318	+		Ga0059261_3935	0.48	-0.7
4,051,318	+		Ga0059261_3935	0.48	+0.0
4,051,318	+		Ga0059261_3935	0.48	+0.5
4,051,318	+		Ga0059261_3935	0.48	+1.1
4,051,318	+		Ga0059261_3935	0.48	+0.1
4,051,318	+		Ga0059261_3935	0.48	-1.1
4,051,318	+		Ga0059261_3935	0.48	-0.7
4,051,318	+		Ga0059261_3935	0.48	+0.7
4,051,318	+		Ga0059261_3935	0.48	-1.1
4,051,318	+		Ga0059261_3935	0.48	-0.5
4,051,318	+		Ga0059261_3935	0.48	-0.1
4,051,318	+		Ga0059261_3935	0.48	+1.1
4,051,319	-		Ga0059261_3935	0.48	+0.1
4,051,319	-		Ga0059261_3935	0.48	+0.4
4,051,319	-		Ga0059261_3935	0.48	-0.8
4,051,319	-		Ga0059261_3935	0.48	+0.0
4,051,319	-		Ga0059261_3935	0.48	-0.2
4,051,319	-		Ga0059261_3935	0.48	-1.5
4,051,319	-		Ga0059261_3935	0.48	+0.3
4,051,319	-		Ga0059261_3935	0.48	-0.4
4,051,319	-		Ga0059261_3935	0.48	-0.7
4,051,319	-		Ga0059261_3935	0.48	+0.5
4,051,319	-		Ga0059261_3935	0.48	-0.1
4,051,319	-		Ga0059261_3935	0.48	+2.9
4,051,322	+		Ga0059261_3935	0.48	+1.0
4,051,322	+		Ga0059261_3935	0.48	+0.3
4,051,322	+		Ga0059261_3935	0.48	+0.2
4,051,322	+		Ga0059261_3935	0.48	+0.5
4,051,322	+		Ga0059261_3935	0.48	-0.2
4,051,322	+		Ga0059261_3935	0.48	+1.1
4,051,322	+		Ga0059261_3935	0.48	+1.3
4,051,322	+		Ga0059261_3935	0.48	-2.7
4,051,322	+		Ga0059261_3935	0.48	-0.7
4,051,323	-		Ga0059261_3935	0.48	+0.3
4,051,323	-		Ga0059261_3935	0.48	-0.7
4,051,323	-				+0.9
4,051,323	-		Ga0059261_3935	0.48	-1.0
4,051,323	-		Ga0059261_3935	0.48	-0.3
4,051,323	-				+0.9
4,051,323	-		Ga0059261_3935	0.48	+0.2
4,051,381	+		Ga0059261_3935	0.53	-0.5
4,051,382	-		Ga0059261_3935	0.53	+0.3
4,051,667	+		Ga0059261_3935	0.77	+0.3
4,051,668	-		Ga0059261_3935	0.77	+0.5
4,051,832	+				-0.4
4,052,180	+		Ga0059261_3936	0.36	+0.2
4,052,180	+		Ga0059261_3936	0.36	-0.1
4,052,181	-		Ga0059261_3936	0.36	-0.7
4,052,387	+		Ga0059261_3936	0.67	-0.4
4,052,387	+		Ga0059261_3936	0.67	+0.2
4,052,387	+		Ga0059261_3936	0.67	+0.2
4,052,387	+		Ga0059261_3936	0.67	-0.6
4,052,387	+		Ga0059261_3936	0.67	-0.8
4,052,387	+		Ga0059261_3936	0.67	+0.2
4,052,388	-		Ga0059261_3936	0.67	+0.8
4,052,388	-		Ga0059261_3936	0.67	+0.2
4,052,388	-		Ga0059261_3936	0.67	-0.5
4,052,388	-		Ga0059261_3936	0.67	+0.4
4,052,388	-		Ga0059261_3936	0.67	+1.0
4,052,388	-		Ga0059261_3936	0.67	-0.0
4,052,388	-		Ga0059261_3936	0.67	-0.1
4,052,388	-		Ga0059261_3936	0.67	-1.1
4,052,388	-		Ga0059261_3936	0.67	+0.9
4,052,391	+		Ga0059261_3936	0.67	-1.4
4,052,391	+				-0.1
4,052,391	+		Ga0059261_3936	0.67	-1.7
4,052,392	-		Ga0059261_3936	0.67	-0.2
4,052,392	-		Ga0059261_3936	0.67	-0.3
4,052,392	-		Ga0059261_3936	0.67	+0.2
4,052,392	-		Ga0059261_3936	0.67	+0.2
4,052,676	-				+1.2
4,052,676	-				+0.9
4,052,730	+				+0.6
4,052,730	+				+3.5
4,052,731	-				+1.4
4,052,731	-				-0.7
4,052,731	-				+1.5
4,052,880	+		Ga0059261_3937	0.10	+0.9
4,052,892	+				+1.7
4,052,892	+		Ga0059261_3937	0.11	+1.8
4,052,892	+		Ga0059261_3937	0.11	+1.1
4,052,892	+		Ga0059261_3937	0.11	+1.5
4,052,893	-		Ga0059261_3937	0.11	+1.0
4,052,893	-		Ga0059261_3937	0.11	+1.1
4,052,893	-		Ga0059261_3937	0.11	+1.3
4,052,893	-		Ga0059261_3937	0.11	+1.0
4,052,893	-		Ga0059261_3937	0.11	+1.4
4,053,063	+		Ga0059261_3937	0.23	-0.5
4,053,064	-		Ga0059261_3937	0.23	+1.4
4,053,108	+		Ga0059261_3937	0.26	+1.0
4,053,188	+		Ga0059261_3937	0.32	-0.3
4,053,188	+		Ga0059261_3937	0.32	+0.5
4,053,188	+		Ga0059261_3937	0.32	+0.3
4,053,189	-		Ga0059261_3937	0.32	+1.6
4,053,189	-		Ga0059261_3937	0.32	+1.3
4,053,189	-		Ga0059261_3937	0.32	+3.2
4,053,189	-		Ga0059261_3937	0.32	+0.3
4,053,189	-		Ga0059261_3937	0.32	+1.5
4,053,189	-		Ga0059261_3937	0.32	+3.4
4,053,189	-		Ga0059261_3937	0.32	+1.1
4,053,312	+		Ga0059261_3937	0.40	+0.8
4,053,312	+		Ga0059261_3937	0.40	+0.5
4,053,313	-		Ga0059261_3937	0.40	+1.2
4,053,313	-		Ga0059261_3937	0.40	+0.4
4,053,396	+		Ga0059261_3937	0.46	+1.6
4,053,396	+		Ga0059261_3937	0.46	+0.6
4,053,397	-		Ga0059261_3937	0.46	+1.9
4,053,438	-		Ga0059261_3937	0.49	+0.3
4,053,478	-		Ga0059261_3937	0.52	+1.1
4,053,478	-		Ga0059261_3937	0.52	+1.2
4,053,478	-				+0.4
4,053,478	-		Ga0059261_3937	0.52	+0.8
4,053,478	-		Ga0059261_3937	0.52	+1.9
4,053,498	+		Ga0059261_3937	0.53	+1.1
4,053,498	+		Ga0059261_3937	0.53	+0.6
4,053,498	+				-1.1
4,053,498	+		Ga0059261_3937	0.53	+1.1
4,053,498	+		Ga0059261_3937	0.53	+0.6
4,053,498	+		Ga0059261_3937	0.53	+0.7
4,053,498	+		Ga0059261_3937	0.53	+0.4
4,053,498	+		Ga0059261_3937	0.53	+0.3
4,053,498	+		Ga0059261_3937	0.53	+0.1
4,053,499	-		Ga0059261_3937	0.54	+1.1
4,053,499	-		Ga0059261_3937	0.54	+0.9
4,053,499	-				+1.5
4,053,499	-		Ga0059261_3937	0.54	+1.5
4,053,499	-		Ga0059261_3937	0.54	+1.1
4,053,545	+		Ga0059261_3937	0.57	+0.9
4,053,545	+		Ga0059261_3937	0.57	+0.3
4,053,595	-		Ga0059261_3937	0.60	+1.4