Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3220

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
3,350,520	+		Ga0059261_3218	0.68	-0.0
3,350,521	-		Ga0059261_3218	0.68	-0.3
3,350,521	-		Ga0059261_3218	0.68	-0.7
3,350,521	-		Ga0059261_3218	0.68	-0.3
3,350,521	-		Ga0059261_3218	0.68	+0.8
3,350,521	-		Ga0059261_3218	0.68	-0.3
3,350,521	-		Ga0059261_3218	0.68	-0.2
3,350,522	+		Ga0059261_3218	0.68	-0.4
3,350,522	+		Ga0059261_3218	0.68	+1.6
3,350,522	+		Ga0059261_3218	0.68	-0.0
3,350,522	+		Ga0059261_3218	0.68	+1.0
3,350,522	+		Ga0059261_3218	0.68	-0.0
3,350,522	+		Ga0059261_3218	0.68	-0.4
3,350,522	+		Ga0059261_3218	0.68	+0.9
3,350,522	+		Ga0059261_3218	0.68	-0.1
3,350,522	+				+1.2
3,350,522	+		Ga0059261_3218	0.68	+0.5
3,350,522	+		Ga0059261_3218	0.68	-0.4
3,350,522	+		Ga0059261_3218	0.68	+0.7
3,350,523	-		Ga0059261_3218	0.68	-0.6
3,350,523	-		Ga0059261_3218	0.68	+0.2
3,350,523	-		Ga0059261_3218	0.68	-0.6
3,350,523	-		Ga0059261_3218	0.68	+1.0
3,350,523	-		Ga0059261_3218	0.68	+1.6
3,350,523	-		Ga0059261_3218	0.68	-0.7
3,350,523	-		Ga0059261_3218	0.68	+0.5
3,350,523	-		Ga0059261_3218	0.68	-0.4
3,350,523	-		Ga0059261_3218	0.68	-0.3
3,350,523	-		Ga0059261_3218	0.68	-0.2
3,350,523	-		Ga0059261_3218	0.68	-1.6
3,350,523	-		Ga0059261_3218	0.68	-0.6
3,350,523	-				-1.4
3,350,530	-		Ga0059261_3218	0.70	+0.1
3,350,530	-		Ga0059261_3218	0.70	-0.4
3,350,682	+				+1.6
3,350,683	-				-0.6
3,350,760	+				+0.3
3,350,760	+				-0.9
3,350,760	+				-2.6
3,350,761	-				+0.6
3,350,761	-				+1.4
3,350,761	-				-0.5
3,350,805	-				+1.1
3,350,959	+		Ga0059261_3219	0.13	-1.5
3,350,960	-		Ga0059261_3219	0.13	-0.3
3,351,334	+		Ga0059261_3219	0.78	-0.2
3,351,335	-		Ga0059261_3219	0.78	+1.0
3,351,335	-		Ga0059261_3219	0.78	+0.1
3,351,361	+		Ga0059261_3219	0.83	+0.0
3,351,361	+		Ga0059261_3219	0.83	+1.2
3,351,361	+		Ga0059261_3219	0.83	-0.0
3,351,362	-		Ga0059261_3219	0.83	-0.8
3,351,362	-		Ga0059261_3219	0.83	-0.6
3,351,421	+				-0.2
3,351,421	+				-0.2
3,351,468	+				-0.4
3,351,469	-				-0.2
3,351,469	-				-0.4
3,351,498	+				-0.0
3,351,498	+				-0.3
3,351,498	+				-0.1
3,351,499	-				+0.1
3,351,499	-				+0.7
3,351,561	+				-1.1
3,351,562	-				+0.5
3,351,564	-				+0.1
3,351,564	-				-0.0
3,351,606	+		Ga0059261_3220	0.10	+0.5
3,351,606	+		Ga0059261_3220	0.10	-1.1
3,351,606	+		Ga0059261_3220	0.10	-0.4
3,351,607	-		Ga0059261_3220	0.10	+0.7
3,351,607	-		Ga0059261_3220	0.10	-1.4
3,351,607	-		Ga0059261_3220	0.10	-0.3
3,351,625	+		Ga0059261_3220	0.12	+0.1
3,351,684	+		Ga0059261_3220	0.16	-2.6
3,351,684	+		Ga0059261_3220	0.16	-0.6
3,351,685	-		Ga0059261_3220	0.16	+0.6
3,351,685	-		Ga0059261_3220	0.16	+0.2
3,351,804	+		Ga0059261_3220	0.26	-0.0
3,351,804	+		Ga0059261_3220	0.26	-0.7
3,351,804	+		Ga0059261_3220	0.26	-0.7
3,351,804	+		Ga0059261_3220	0.26	+0.1
3,351,804	+		Ga0059261_3220	0.26	-0.5
3,351,804	+		Ga0059261_3220	0.26	-0.0
3,351,804	+		Ga0059261_3220	0.26	-0.3
3,351,804	+		Ga0059261_3220	0.26	+0.8
3,351,804	+		Ga0059261_3220	0.26	-1.2
3,351,805	-		Ga0059261_3220	0.26	-1.1
3,351,805	-		Ga0059261_3220	0.26	-0.6
3,351,805	-		Ga0059261_3220	0.26	-0.9
3,351,805	-		Ga0059261_3220	0.26	-1.1
3,351,805	-		Ga0059261_3220	0.26	+0.3
3,351,805	-		Ga0059261_3220	0.26	+0.2
3,351,805	-		Ga0059261_3220	0.26	-0.2
3,351,805	-		Ga0059261_3220	0.26	-0.0
3,351,806	+		Ga0059261_3220	0.26	-1.6
3,351,806	+		Ga0059261_3220	0.26	-1.4
3,351,806	+		Ga0059261_3220	0.26	-0.6
3,351,806	+		Ga0059261_3220	0.26	-0.7
3,351,807	-		Ga0059261_3220	0.26	-0.6
3,351,809	-		Ga0059261_3220	0.26	-0.2
3,351,813	-		Ga0059261_3220	0.26	+1.3
3,351,840	+		Ga0059261_3220	0.28	+1.2
3,351,840	+		Ga0059261_3220	0.28	-1.8
3,351,840	+		Ga0059261_3220	0.28	+1.0
3,351,841	-		Ga0059261_3220	0.28	+1.0
3,351,841	-		Ga0059261_3220	0.28	+0.6
3,351,841	-		Ga0059261_3220	0.28	-0.5
3,351,841	-		Ga0059261_3220	0.28	+0.4
3,351,841	-		Ga0059261_3220	0.28	-0.3
3,351,841	-		Ga0059261_3220	0.28	-1.2
3,351,841	-		Ga0059261_3220	0.28	-0.0
3,351,918	+		Ga0059261_3220	0.34	-0.1
3,351,918	+		Ga0059261_3220	0.34	-0.8
3,351,918	+		Ga0059261_3220	0.34	-0.5
3,351,918	+		Ga0059261_3220	0.34	-2.2
3,351,918	+		Ga0059261_3220	0.34	-0.8
3,351,918	+		Ga0059261_3220	0.34	-0.6
3,351,918	+		Ga0059261_3220	0.34	-0.6
3,351,918	+		Ga0059261_3220	0.34	-1.1
3,351,918	+		Ga0059261_3220	0.34	-0.5
3,351,919	-		Ga0059261_3220	0.34	-0.7
3,351,919	-		Ga0059261_3220	0.34	+0.3
3,351,919	-		Ga0059261_3220	0.34	-0.4
3,352,074	+		Ga0059261_3220	0.47	+1.1
3,352,074	+		Ga0059261_3220	0.47	-0.3
3,352,074	+		Ga0059261_3220	0.47	+0.3
3,352,074	+		Ga0059261_3220	0.47	-1.7
3,352,074	+				-0.0
3,352,200	+		Ga0059261_3220	0.56	+0.4
3,352,201	-		Ga0059261_3220	0.56	-0.6
3,352,201	-		Ga0059261_3220	0.56	-0.6
3,352,203	+		Ga0059261_3220	0.57	-1.7
3,352,203	+		Ga0059261_3220	0.57	-0.9
3,352,203	+		Ga0059261_3220	0.57	-1.4
3,352,203	+		Ga0059261_3220	0.57	+1.5
3,352,203	+		Ga0059261_3220	0.57	-1.3
3,352,203	+		Ga0059261_3220	0.57	+1.2
3,352,203	+		Ga0059261_3220	0.57	+0.4
3,352,203	+		Ga0059261_3220	0.57	-0.1
3,352,203	+		Ga0059261_3220	0.57	-2.5
3,352,204	-		Ga0059261_3220	0.57	-1.4
3,352,204	-		Ga0059261_3220	0.57	+0.8
3,352,204	-		Ga0059261_3220	0.57	+0.2
3,352,204	-		Ga0059261_3220	0.57	+1.0
3,352,204	-		Ga0059261_3220	0.57	-2.2
3,352,204	-		Ga0059261_3220	0.57	-0.8
3,352,228	+		Ga0059261_3220	0.58	-0.1
3,352,228	+		Ga0059261_3220	0.58	-0.2
3,352,229	-		Ga0059261_3220	0.59	-0.0
3,352,299	+		Ga0059261_3220	0.64	-0.0
3,352,299	+		Ga0059261_3220	0.64	-0.2
3,352,299	+		Ga0059261_3220	0.64	-0.3
3,352,299	+		Ga0059261_3220	0.64	-0.8
3,352,299	+				+1.0
3,352,299	+		Ga0059261_3220	0.64	-0.8
3,352,299	+		Ga0059261_3220	0.64	-0.2
3,352,299	+		Ga0059261_3220	0.64	-0.6
3,352,299	+		Ga0059261_3220	0.64	-0.4
3,352,300	-		Ga0059261_3220	0.64	-0.0
3,352,300	-		Ga0059261_3220	0.64	-0.8
3,352,300	-		Ga0059261_3220	0.64	-0.0
3,352,300	-		Ga0059261_3220	0.64	-0.3
3,352,300	-		Ga0059261_3220	0.64	-0.1
3,352,300	-		Ga0059261_3220	0.64	+0.4
3,352,334	+		Ga0059261_3220	0.67	-1.0
3,352,334	+		Ga0059261_3220	0.67	-1.3
3,352,334	+		Ga0059261_3220	0.67	+2.0
3,352,334	+		Ga0059261_3220	0.67	+0.1
3,352,334	+		Ga0059261_3220	0.67	-0.1
3,352,335	-		Ga0059261_3220	0.67	-0.6
3,352,335	-		Ga0059261_3220	0.67	-0.2
3,352,335	-		Ga0059261_3220	0.67	-1.2
3,352,350	+		Ga0059261_3220	0.68	-0.2
3,352,350	+		Ga0059261_3220	0.68	+0.1
3,352,350	+		Ga0059261_3220	0.68	+0.3
3,352,365	+		Ga0059261_3220	0.69	-1.8
3,352,365	+		Ga0059261_3220	0.69	+1.3
3,352,365	+				+2.2
3,352,366	-		Ga0059261_3220	0.69	-0.6
3,352,366	-		Ga0059261_3220	0.69	-0.9
3,352,500	+		Ga0059261_3220	0.80	-1.4
3,352,500	+		Ga0059261_3220	0.80	-1.1
3,352,501	-		Ga0059261_3220	0.80	-0.8
3,352,512	+		Ga0059261_3220	0.80	+0.2
3,352,512	+		Ga0059261_3220	0.80	-0.1
3,352,512	+		Ga0059261_3220	0.80	+0.6
3,352,512	+		Ga0059261_3220	0.80	-0.2
3,352,512	+		Ga0059261_3220	0.80	-0.5
3,352,513	-		Ga0059261_3220	0.81	+1.0
3,352,513	-		Ga0059261_3220	0.81	+1.0
3,352,560	+		Ga0059261_3220	0.84	-0.4
3,352,560	+		Ga0059261_3220	0.84	-0.6
3,352,561	-		Ga0059261_3220	0.84	+0.6
3,352,562	+		Ga0059261_3220	0.84	+0.2
3,352,562	+		Ga0059261_3220	0.84	+0.1
3,352,562	+		Ga0059261_3220	0.84	+0.0
3,352,620	+		Ga0059261_3220	0.89	-1.5
3,352,620	+		Ga0059261_3220	0.89	-0.6
3,352,620	+		Ga0059261_3220	0.89	-1.8
3,352,621	-		Ga0059261_3220	0.89	-1.5
3,352,621	-		Ga0059261_3220	0.89	-2.2
3,352,621	-		Ga0059261_3220	0.89	+0.3
3,352,621	-		Ga0059261_3220	0.89	-1.6
3,352,621	-		Ga0059261_3220	0.89	-0.2
3,352,623	+		Ga0059261_3220	0.89	+0.1
3,352,623	+		Ga0059261_3220	0.89	-1.4
3,352,623	+		Ga0059261_3220	0.89	-0.6
3,352,623	+		Ga0059261_3220	0.89	-0.9
3,352,761	+				+0.3
3,352,777	+				-0.4
3,352,778	-				-0.5
3,352,778	-				-0.4
3,352,778	-				+1.0
3,352,778	-				+0.0
3,352,778	-				+1.1
3,352,778	-				-1.8
3,352,778	-				-0.8
3,352,778	-				-0.4
3,352,801	+				-1.8
3,352,802	-				-0.0
3,352,802	-				+0.3
3,352,856	+				-2.5
3,352,856	+				-0.8
3,352,856	+				-0.0
3,352,856	+				+0.9
3,352,856	+				-0.1
3,352,856	+				+0.6
3,352,856	+				+0.3
3,352,857	-				-2.8
3,352,857	-				-0.7
3,352,857	-				-0.3
3,352,857	-				-0.1
3,352,955	+		Ga0059261_3221	0.20	+1.6
3,352,955	+		Ga0059261_3221	0.20	+1.0
3,352,956	-		Ga0059261_3221	0.20	-0.3
3,352,956	-		Ga0059261_3221	0.20	+0.4
3,352,991	+		Ga0059261_3221	0.25	-0.0
3,352,991	+		Ga0059261_3221	0.25	-0.1
3,352,992	-		Ga0059261_3221	0.25	+0.5
3,352,992	-		Ga0059261_3221	0.25	-0.7
3,352,992	-		Ga0059261_3221	0.25	-0.8
3,352,992	-		Ga0059261_3221	0.25	-0.5
3,353,060	+		Ga0059261_3221	0.33	-0.2
3,353,062	+		Ga0059261_3221	0.33	+0.2
3,353,062	+		Ga0059261_3221	0.33	+1.2
3,353,063	-		Ga0059261_3221	0.33	-2.4
3,353,063	-		Ga0059261_3221	0.33	-0.5
3,353,177	+		Ga0059261_3221	0.46	-0.0
3,353,178	-		Ga0059261_3221	0.46	-0.4
3,353,270	+		Ga0059261_3221	0.57	-0.2
3,353,270	+		Ga0059261_3221	0.57	-0.7
3,353,270	+		Ga0059261_3221	0.57	+0.8
3,353,270	+		Ga0059261_3221	0.57	-0.0
3,353,270	+		Ga0059261_3221	0.57	+0.3
3,353,270	+		Ga0059261_3221	0.57	-0.9
3,353,270	+		Ga0059261_3221	0.57	-0.0
3,353,270	+		Ga0059261_3221	0.57	+0.6
3,353,270	+		Ga0059261_3221	0.57	-0.4
3,353,270	+		Ga0059261_3221	0.57	+1.2
3,353,270	+		Ga0059261_3221	0.57	-1.6
3,353,270	+		Ga0059261_3221	0.57	-0.4
3,353,270	+		Ga0059261_3221	0.57	-0.7
3,353,270	+		Ga0059261_3221	0.57	-0.4
3,353,270	+		Ga0059261_3221	0.57	-0.7
3,353,270	+		Ga0059261_3221	0.57	-1.5
3,353,270	+		Ga0059261_3221	0.57	-0.8
3,353,270	+		Ga0059261_3221	0.57	-0.7
3,353,271	-		Ga0059261_3221	0.57	-1.1
3,353,271	-		Ga0059261_3221	0.57	-0.4
3,353,271	-		Ga0059261_3221	0.57	-0.9
3,353,271	-		Ga0059261_3221	0.57	+0.6
3,353,271	-		Ga0059261_3221	0.57	-1.1
3,353,271	-		Ga0059261_3221	0.57	-1.9
3,353,271	-		Ga0059261_3221	0.57	-2.4
3,353,271	-		Ga0059261_3221	0.57	-0.8
3,353,271	-		Ga0059261_3221	0.57	-0.0
3,353,271	-		Ga0059261_3221	0.57	+1.2
3,353,271	-		Ga0059261_3221	0.57	-2.4
3,353,271	-		Ga0059261_3221	0.57	-0.4
3,353,272	+		Ga0059261_3221	0.57	-1.4
3,353,272	+		Ga0059261_3221	0.57	+0.2
3,353,272	+		Ga0059261_3221	0.57	+0.2
3,353,272	+		Ga0059261_3221	0.57	+0.0
3,353,272	+		Ga0059261_3221	0.57	+1.6
3,353,272	+		Ga0059261_3221	0.57	-0.9
3,353,272	+		Ga0059261_3221	0.57	-1.8
3,353,272	+		Ga0059261_3221	0.57	+0.6
3,353,272	+		Ga0059261_3221	0.57	-0.9
3,353,273	-		Ga0059261_3221	0.58	-1.8
3,353,273	-		Ga0059261_3221	0.58	-0.5
3,353,273	-		Ga0059261_3221	0.58	+0.4
3,353,273	-		Ga0059261_3221	0.58	-0.2
3,353,273	-		Ga0059261_3221	0.58	-1.4
3,353,273	-		Ga0059261_3221	0.58	-1.1
3,353,274	+		Ga0059261_3221	0.58	+0.5
3,353,276	+		Ga0059261_3221	0.58	-0.9
3,353,276	+		Ga0059261_3221	0.58	-0.7
3,353,276	+				+1.0
3,353,276	+		Ga0059261_3221	0.58	+2.1
3,353,276	+		Ga0059261_3221	0.58	-0.3
3,353,277	-		Ga0059261_3221	0.58	-1.0
3,353,277	-		Ga0059261_3221	0.58	-0.8
3,353,313	-		Ga0059261_3221	0.62	+1.0
3,353,390	+		Ga0059261_3221	0.71	+0.6
3,353,390	+		Ga0059261_3221	0.71	-0.4
3,353,390	+		Ga0059261_3221	0.71	+1.0
3,353,391	-		Ga0059261_3221	0.71	+1.6
3,353,391	-		Ga0059261_3221	0.71	-2.1
3,353,447	+		Ga0059261_3221	0.78	-2.8
3,353,448	-		Ga0059261_3221	0.78	-0.3
3,353,480	+		Ga0059261_3221	0.82	-0.9
3,353,480	+		Ga0059261_3221	0.82	+0.4
3,353,480	+		Ga0059261_3221	0.82	+1.3
3,353,480	+		Ga0059261_3221	0.82	-0.4
3,353,480	+		Ga0059261_3221	0.82	-0.4
3,353,480	+		Ga0059261_3221	0.82	+0.0
3,353,481	-		Ga0059261_3221	0.82	+0.2
3,353,481	-		Ga0059261_3221	0.82	-0.6
3,353,594	+				-0.1
3,353,594	+				+0.8
3,353,595	-				-0.2
3,353,595	-				+0.1
3,353,703	+				-0.5
3,353,704	-				-0.9