Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3156

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
3,294,665	-		Ga0059261_3155	0.16	-0.7
3,294,688	+		Ga0059261_3155	0.18	-0.1
3,294,688	+				+1.0
3,294,688	+		Ga0059261_3155	0.18	-1.6
3,294,688	+		Ga0059261_3155	0.18	+0.8
3,294,689	-		Ga0059261_3155	0.18	+0.4
3,294,689	-		Ga0059261_3155	0.18	+1.0
3,294,689	-		Ga0059261_3155	0.18	-0.6
3,294,689	-		Ga0059261_3155	0.18	+0.1
3,294,727	+		Ga0059261_3155	0.22	-1.1
3,294,727	+		Ga0059261_3155	0.22	+0.6
3,294,727	+		Ga0059261_3155	0.22	-0.5
3,294,727	+		Ga0059261_3155	0.22	-0.8
3,294,727	+		Ga0059261_3155	0.22	-0.7
3,294,727	+				+1.6
3,294,728	-		Ga0059261_3155	0.22	+0.5
3,294,728	-		Ga0059261_3155	0.22	+0.4
3,294,728	-		Ga0059261_3155	0.22	+0.1
3,294,807	-		Ga0059261_3155	0.30	-2.0
3,294,807	-		Ga0059261_3155	0.30	+0.4
3,294,807	-		Ga0059261_3155	0.30	-2.1
3,294,865	+		Ga0059261_3155	0.36	-0.2
3,294,865	+		Ga0059261_3155	0.36	+0.4
3,294,865	+		Ga0059261_3155	0.36	-0.9
3,294,865	+		Ga0059261_3155	0.36	-0.5
3,294,866	-		Ga0059261_3155	0.36	+0.7
3,294,866	-		Ga0059261_3155	0.36	+0.7
3,294,866	-		Ga0059261_3155	0.36	-0.1
3,294,866	-		Ga0059261_3155	0.36	-1.7
3,294,866	-		Ga0059261_3155	0.36	-0.4
3,294,866	-		Ga0059261_3155	0.36	-1.6
3,294,946	+		Ga0059261_3155	0.44	-1.1
3,294,946	+		Ga0059261_3155	0.44	-0.9
3,294,946	+		Ga0059261_3155	0.44	-0.3
3,294,946	+				-0.8
3,294,947	-		Ga0059261_3155	0.44	-1.0
3,294,947	-		Ga0059261_3155	0.44	-0.6
3,294,947	-		Ga0059261_3155	0.44	+0.5
3,294,982	+		Ga0059261_3155	0.47	-1.3
3,294,982	+		Ga0059261_3155	0.47	-1.1
3,294,982	+		Ga0059261_3155	0.47	-0.1
3,294,982	+		Ga0059261_3155	0.47	-0.8
3,294,982	+		Ga0059261_3155	0.47	+0.1
3,294,982	+		Ga0059261_3155	0.47	+1.3
3,294,982	+		Ga0059261_3155	0.47	-0.3
3,294,982	+		Ga0059261_3155	0.47	-0.4
3,294,982	+		Ga0059261_3155	0.47	-0.3
3,294,983	-		Ga0059261_3155	0.47	-0.3
3,294,983	-		Ga0059261_3155	0.47	+0.2
3,294,983	-		Ga0059261_3155	0.47	-0.8
3,294,983	-		Ga0059261_3155	0.47	-1.1
3,294,983	-		Ga0059261_3155	0.47	-0.7
3,294,983	-		Ga0059261_3155	0.47	-1.4
3,294,983	-		Ga0059261_3155	0.47	-1.0
3,294,983	-		Ga0059261_3155	0.47	+0.1
3,294,983	-				-0.0
3,295,009	+		Ga0059261_3155	0.50	+0.4
3,295,105	+		Ga0059261_3155	0.60	+0.4
3,295,106	-		Ga0059261_3155	0.60	-0.2
3,295,127	+		Ga0059261_3155	0.62	+0.3
3,295,289	-		Ga0059261_3155	0.78	+0.8
3,295,289	-		Ga0059261_3155	0.78	-0.3
3,295,294	+		Ga0059261_3155	0.78	-0.1
3,295,294	+		Ga0059261_3155	0.78	+0.0
3,295,294	+		Ga0059261_3155	0.78	+0.3
3,295,294	+		Ga0059261_3155	0.78	+0.5
3,295,294	+		Ga0059261_3155	0.78	-0.2
3,295,294	+		Ga0059261_3155	0.78	-0.3
3,295,294	+		Ga0059261_3155	0.78	+1.5
3,295,294	+		Ga0059261_3155	0.78	+0.6
3,295,294	+		Ga0059261_3155	0.78	-0.1
3,295,295	-		Ga0059261_3155	0.79	-0.5
3,295,295	-		Ga0059261_3155	0.79	+0.4
3,295,295	-		Ga0059261_3155	0.79	-0.2
3,295,295	-		Ga0059261_3155	0.79	-0.3
3,295,295	-		Ga0059261_3155	0.79	+0.5
3,295,295	-		Ga0059261_3155	0.79	+0.4
3,295,295	-				-0.3
3,295,351	+		Ga0059261_3155	0.84	+0.1
3,295,351	+		Ga0059261_3155	0.84	+0.8
3,295,351	+		Ga0059261_3155	0.84	+0.6
3,295,352	-		Ga0059261_3155	0.84	+0.5
3,295,352	-		Ga0059261_3155	0.84	-0.2
3,295,353	+		Ga0059261_3155	0.84	+0.4
3,295,353	+		Ga0059261_3155	0.84	+0.3
3,295,369	+		Ga0059261_3155	0.86	+0.2
3,295,369	+		Ga0059261_3155	0.86	-0.5
3,295,369	+		Ga0059261_3155	0.86	+0.4
3,295,370	-		Ga0059261_3155	0.86	+0.1
3,295,370	-		Ga0059261_3155	0.86	+0.1
3,295,370	-		Ga0059261_3155	0.86	+1.1
3,295,370	-		Ga0059261_3155	0.86	+0.2
3,295,462	+				+0.3
3,295,462	+				-0.7
3,295,462	+				-0.0
3,295,462	+				-1.0
3,295,462	+				+0.0
3,295,462	+				-0.2
3,295,462	+				+0.2
3,295,462	+				+0.2
3,295,463	-				-0.6
3,295,463	-				+0.5
3,295,463	-				-1.0
3,295,463	-				-0.4
3,295,463	-				+0.1
3,295,463	-				-0.0
3,295,463	-				-0.2
3,295,463	-				-1.0
3,295,463	-				+0.3
3,295,463	-				+0.3
3,295,467	+				-0.6
3,295,468	-				+0.3
3,295,468	-				+0.2
3,295,472	-				+0.2
3,295,649	+		Ga0059261_3156	0.16	-1.7
3,295,649	+		Ga0059261_3156	0.16	-2.3
3,295,649	+		Ga0059261_3156	0.16	-0.4
3,295,650	-		Ga0059261_3156	0.17	-1.5
3,295,650	-		Ga0059261_3156	0.17	-1.1
3,295,650	-		Ga0059261_3156	0.17	-1.4
3,295,650	-		Ga0059261_3156	0.17	-2.7
3,295,697	+		Ga0059261_3156	0.26	-1.3
3,295,698	-		Ga0059261_3156	0.26	-1.0
3,295,698	-				-1.0
3,295,743	-		Ga0059261_3156	0.35	-1.0
3,295,743	-		Ga0059261_3156	0.35	-1.2
3,295,859	+		Ga0059261_3156	0.57	-1.5
3,295,859	+		Ga0059261_3156	0.57	-0.7
3,295,859	+		Ga0059261_3156	0.57	-3.9
3,295,859	+				-0.6
3,295,859	+		Ga0059261_3156	0.57	+0.2
3,295,859	+		Ga0059261_3156	0.57	+0.6
3,295,860	-		Ga0059261_3156	0.57	-1.0
3,295,860	-		Ga0059261_3156	0.57	-1.2
3,296,067	+				-2.6
3,296,067	+				-0.2
3,296,067	+				+0.5
3,296,068	-				+1.0
3,296,068	-				+0.2
3,296,068	-				-1.4
3,296,086	+				-2.3
3,296,086	+				-2.0
3,296,086	+				-0.3
3,296,087	-				-0.0
3,296,087	-				-0.0
3,296,087	-				+0.1
3,296,103	-				+1.1
3,296,154	+				-3.2
3,296,155	-				+0.6
3,296,237	+				-0.4
3,296,237	+				-0.0
3,296,238	-				-1.6
3,296,273	-				-2.0
3,296,273	-				+1.0
3,296,444	-		Ga0059261_3157	0.22	-0.8
3,296,500	+		Ga0059261_3157	0.26	-1.2
3,296,500	+		Ga0059261_3157	0.26	-1.3
3,296,500	+		Ga0059261_3157	0.26	-1.0
3,296,500	+		Ga0059261_3157	0.26	-0.6
3,296,500	+		Ga0059261_3157	0.26	-1.2
3,296,500	+		Ga0059261_3157	0.26	-0.9
3,296,500	+		Ga0059261_3157	0.26	-0.3
3,296,500	+		Ga0059261_3157	0.26	-2.9
3,296,500	+		Ga0059261_3157	0.26	-1.4
3,296,500	+		Ga0059261_3157	0.26	-1.0
3,296,501	-		Ga0059261_3157	0.26	-0.7
3,296,501	-		Ga0059261_3157	0.26	-1.1
3,296,501	-		Ga0059261_3157	0.26	-0.9
3,296,501	-		Ga0059261_3157	0.26	-1.6
3,296,501	-		Ga0059261_3157	0.26	-2.9
3,296,501	-		Ga0059261_3157	0.26	-1.8
3,296,501	-		Ga0059261_3157	0.26	-1.5
3,296,501	-				-0.3
3,296,501	-		Ga0059261_3157	0.26	+0.4
3,296,501	-		Ga0059261_3157	0.26	-0.6
3,296,501	-		Ga0059261_3157	0.26	-2.0
3,296,560	+		Ga0059261_3157	0.30	-1.8
3,296,561	-		Ga0059261_3157	0.31	-2.1
3,296,561	-		Ga0059261_3157	0.31	-0.5
3,296,561	-		Ga0059261_3157	0.31	-1.8
3,296,632	+		Ga0059261_3157	0.36	-0.6
3,296,632	+		Ga0059261_3157	0.36	-1.6
3,296,632	+		Ga0059261_3157	0.36	-1.6
3,296,632	+		Ga0059261_3157	0.36	+0.3
3,296,633	-		Ga0059261_3157	0.36	-1.3
3,296,633	-		Ga0059261_3157	0.36	-1.9
3,296,636	+		Ga0059261_3157	0.36	-1.6
3,296,636	+		Ga0059261_3157	0.36	-1.4
3,296,636	+		Ga0059261_3157	0.36	+1.8
3,296,637	-		Ga0059261_3157	0.36	-3.0
3,296,637	-		Ga0059261_3157	0.36	-0.9
3,296,637	-		Ga0059261_3157	0.36	+0.3
3,296,758	+		Ga0059261_3157	0.45	-1.1
3,296,758	+				+1.0
3,296,758	+		Ga0059261_3157	0.45	-2.0
3,296,759	-		Ga0059261_3157	0.45	-0.3
3,296,759	-		Ga0059261_3157	0.45	+1.3
3,296,759	-				+1.0
3,296,759	-		Ga0059261_3157	0.45	-1.6
3,296,764	+		Ga0059261_3157	0.45	-2.8
3,296,764	+		Ga0059261_3157	0.45	-1.5
3,296,764	+		Ga0059261_3157	0.45	-3.3
3,296,765	-		Ga0059261_3157	0.46	-2.7
3,296,765	-		Ga0059261_3157	0.46	-2.0
3,296,765	-		Ga0059261_3157	0.46	-0.0
3,296,765	-		Ga0059261_3157	0.46	-0.4
3,296,765	-		Ga0059261_3157	0.46	-0.4
3,296,765	-		Ga0059261_3157	0.46	-2.0
3,296,765	-		Ga0059261_3157	0.46	-0.3
3,296,765	-		Ga0059261_3157	0.46	-1.3
3,296,777	+		Ga0059261_3157	0.46	-2.0
3,296,788	+		Ga0059261_3157	0.47	-1.7
3,296,789	-		Ga0059261_3157	0.47	-1.2
3,296,795	+		Ga0059261_3157	0.48	-2.3
3,296,795	+		Ga0059261_3157	0.48	-0.7
3,296,795	+		Ga0059261_3157	0.48	-3.0
3,296,796	-		Ga0059261_3157	0.48	-0.7
3,296,796	-		Ga0059261_3157	0.48	-2.5
3,296,796	-				-0.0
3,296,796	-		Ga0059261_3157	0.48	-0.4
3,296,796	-		Ga0059261_3157	0.48	-0.0
3,296,796	-		Ga0059261_3157	0.48	-0.6
3,296,797	+		Ga0059261_3157	0.48	+0.6
3,296,797	+		Ga0059261_3157	0.48	-0.5
3,296,798	-		Ga0059261_3157	0.48	-2.2
3,296,798	-		Ga0059261_3157	0.48	-1.4
3,296,798	-		Ga0059261_3157	0.48	-1.2
3,296,941	+		Ga0059261_3157	0.58	-1.6
3,296,941	+		Ga0059261_3157	0.58	-2.2
3,296,942	-		Ga0059261_3157	0.59	-0.0
3,296,942	-		Ga0059261_3157	0.59	-3.3
3,296,942	-		Ga0059261_3157	0.59	-2.8
3,296,942	-		Ga0059261_3157	0.59	-1.3
3,296,942	-		Ga0059261_3157	0.59	-1.0
3,296,942	-		Ga0059261_3157	0.59	-2.1
3,296,942	-		Ga0059261_3157	0.59	-2.9
3,296,942	-		Ga0059261_3157	0.59	-0.6
3,296,942	-		Ga0059261_3157	0.59	-1.6
3,296,942	-		Ga0059261_3157	0.59	-2.6
3,296,962	+		Ga0059261_3157	0.60	-1.3
3,296,962	+		Ga0059261_3157	0.60	-2.8
3,296,962	+		Ga0059261_3157	0.60	-0.6
3,296,963	-		Ga0059261_3157	0.60	+0.4
3,296,963	-		Ga0059261_3157	0.60	-0.8