Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3129

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
3,270,441	+		Ga0059261_3128	0.56	-0.0
3,270,562	+		Ga0059261_3128	0.62	+0.9
3,270,562	+		Ga0059261_3128	0.62	+0.6
3,270,562	+		Ga0059261_3128	0.62	-0.2
3,270,563	-		Ga0059261_3128	0.62	+1.5
3,270,563	-		Ga0059261_3128	0.62	+0.4
3,270,678	+		Ga0059261_3128	0.67	-1.3
3,270,678	+		Ga0059261_3128	0.67	+0.6
3,270,678	+		Ga0059261_3128	0.67	+0.6
3,270,678	+		Ga0059261_3128	0.67	-0.8
3,270,678	+		Ga0059261_3128	0.67	+0.3
3,270,678	+		Ga0059261_3128	0.67	-0.2
3,270,678	+		Ga0059261_3128	0.67	-0.6
3,270,678	+		Ga0059261_3128	0.67	+2.3
3,270,678	+		Ga0059261_3128	0.67	+0.3
3,270,679	-		Ga0059261_3128	0.67	+0.6
3,270,679	-		Ga0059261_3128	0.67	-2.2
3,270,679	-		Ga0059261_3128	0.67	-0.2
3,270,679	-				-1.0
3,270,679	-		Ga0059261_3128	0.67	-0.8
3,270,679	-		Ga0059261_3128	0.67	+0.1
3,270,679	-		Ga0059261_3128	0.67	-0.2
3,270,679	-		Ga0059261_3128	0.67	+2.0
3,270,679	-		Ga0059261_3128	0.67	-0.0
3,270,679	-		Ga0059261_3128	0.67	+1.0
3,270,720	-		Ga0059261_3128	0.69	+0.4
3,270,740	+		Ga0059261_3128	0.70	+0.1
3,270,740	+		Ga0059261_3128	0.70	+0.6
3,270,740	+		Ga0059261_3128	0.70	+2.2
3,270,740	+				+1.0
3,270,741	-		Ga0059261_3128	0.70	-0.6
3,270,741	-		Ga0059261_3128	0.70	-1.8
3,270,741	-		Ga0059261_3128	0.70	-0.1
3,270,741	-		Ga0059261_3128	0.70	+0.4
3,270,741	-		Ga0059261_3128	0.70	+0.6
3,270,834	-		Ga0059261_3128	0.74	+2.0
3,270,855	+		Ga0059261_3128	0.75	-0.9
3,270,856	-		Ga0059261_3128	0.75	+1.0
3,270,856	-		Ga0059261_3128	0.75	+3.0
3,270,856	-		Ga0059261_3128	0.75	+0.7
3,271,095	+		Ga0059261_3128	0.86	+0.8
3,271,095	+		Ga0059261_3128	0.86	+1.3
3,271,095	+		Ga0059261_3128	0.86	+0.2
3,271,096	-		Ga0059261_3128	0.86	+0.3
3,271,107	+		Ga0059261_3128	0.86	+1.3
3,271,108	-		Ga0059261_3128	0.86	-0.3
3,271,108	-		Ga0059261_3128	0.86	+0.8
3,271,108	-		Ga0059261_3128	0.86	+0.7
3,271,156	+		Ga0059261_3128	0.89	+0.2
3,271,156	+		Ga0059261_3128	0.89	+0.4
3,271,157	-		Ga0059261_3128	0.89	-1.3
3,271,206	+				+1.5
3,271,206	+				+0.2
3,271,206	+				-0.3
3,271,207	-				+1.6
3,271,207	-				-0.5
3,271,207	-				+0.4
3,271,305	+				+0.1
3,271,305	+				+0.4
3,271,417	+				-0.0
3,271,417	+				-0.0
3,271,417	+				+0.7
3,271,417	+				-0.3
3,271,417	+				+0.2
3,271,418	-				+1.3
3,271,418	-				+1.0
3,271,418	-				+1.0
3,271,418	-				-0.2
3,271,418	-				+0.6
3,271,418	-				+1.7
3,271,418	-				+0.3
3,271,418	-				+0.2
3,271,587	+		Ga0059261_3129	0.22	+0.3
3,271,587	+		Ga0059261_3129	0.22	+2.6
3,271,588	-		Ga0059261_3129	0.22	-0.0
3,271,589	+		Ga0059261_3129	0.22	+1.0
3,271,589	+		Ga0059261_3129	0.22	-0.0
3,271,589	+		Ga0059261_3129	0.22	+1.0
3,271,589	+		Ga0059261_3129	0.22	+0.2
3,271,589	+		Ga0059261_3129	0.22	+0.2
3,271,590	-		Ga0059261_3129	0.22	+2.1
3,271,590	-		Ga0059261_3129	0.22	+0.3
3,271,590	-		Ga0059261_3129	0.22	+1.0
3,271,590	-		Ga0059261_3129	0.22	+1.9
3,271,590	-		Ga0059261_3129	0.22	+0.5
3,271,590	-		Ga0059261_3129	0.22	-0.4
3,271,601	+		Ga0059261_3129	0.24	-0.0
3,271,602	-		Ga0059261_3129	0.24	+1.3
3,271,805	+		Ga0059261_3129	0.52	+1.0
3,271,805	+		Ga0059261_3129	0.52	+0.2
3,271,805	+		Ga0059261_3129	0.52	+0.4
3,271,805	+		Ga0059261_3129	0.52	+0.1
3,271,805	+		Ga0059261_3129	0.52	+1.0
3,271,805	+		Ga0059261_3129	0.52	-0.2
3,271,805	+		Ga0059261_3129	0.52	-0.3
3,271,805	+		Ga0059261_3129	0.52	+0.9
3,271,805	+		Ga0059261_3129	0.52	+0.5
3,271,805	+		Ga0059261_3129	0.52	+2.6
3,271,805	+		Ga0059261_3129	0.52	+1.3
3,271,805	+		Ga0059261_3129	0.52	+0.6
3,271,805	+		Ga0059261_3129	0.52	-0.0
3,271,806	-		Ga0059261_3129	0.52	+0.4
3,271,806	-		Ga0059261_3129	0.52	+0.6
3,271,806	-		Ga0059261_3129	0.52	+0.4
3,271,806	-		Ga0059261_3129	0.52	+0.7
3,271,806	-		Ga0059261_3129	0.52	+0.4
3,271,806	-		Ga0059261_3129	0.52	+0.1
3,271,806	-		Ga0059261_3129	0.52	+2.0
3,271,806	-		Ga0059261_3129	0.52	+0.2
3,271,806	-		Ga0059261_3129	0.52	-0.0
3,271,806	-		Ga0059261_3129	0.52	-0.6
3,271,874	-		Ga0059261_3129	0.62	+0.2
3,271,988	+		Ga0059261_3129	0.77	+0.6
3,271,988	+		Ga0059261_3129	0.77	+0.8
3,271,989	-		Ga0059261_3129	0.77	+0.6
3,271,989	-		Ga0059261_3129	0.77	+1.0
3,271,989	-		Ga0059261_3129	0.77	+0.7
3,272,010	+		Ga0059261_3129	0.80	-0.0
3,272,010	+		Ga0059261_3129	0.80	-0.8
3,272,010	+		Ga0059261_3129	0.80	+1.0
3,272,010	+		Ga0059261_3129	0.80	+0.9
3,272,010	+		Ga0059261_3129	0.80	+0.1
3,272,010	+		Ga0059261_3129	0.80	+1.4
3,272,011	-		Ga0059261_3129	0.80	-1.0
3,272,133	+				-0.1
3,272,133	+				+2.6
3,272,151	+				+0.3
3,272,151	+				-0.4
3,272,151	+				+0.9
3,272,151	+				+0.6
3,272,151	+				+0.8
3,272,151	+				+0.7
3,272,151	+				+0.7
3,272,151	+				+0.2
3,272,152	-				-0.0
3,272,152	-				+0.3
3,272,152	-				+0.9
3,272,152	-				+0.4
3,272,152	-				+0.7
3,272,152	-				-0.3
3,272,152	-				-0.2
3,272,152	-				+0.7
3,272,154	+				-0.5
3,272,154	+				-0.2
3,272,154	+				+1.0
3,272,155	-				+1.4
3,272,155	-				-0.0
3,272,155	-				+0.3
3,272,155	-				+1.0
3,272,159	+				+1.7
3,272,159	+				+0.6
3,272,160	-				+0.3
3,272,304	-		Ga0059261_3130	0.10	-1.3
3,272,504	+		Ga0059261_3130	0.24	-1.1
3,272,504	+		Ga0059261_3130	0.24	+0.4
3,272,504	+		Ga0059261_3130	0.24	+1.7
3,272,543	+		Ga0059261_3130	0.27	+0.1
3,272,543	+		Ga0059261_3130	0.27	+0.6
3,272,543	+		Ga0059261_3130	0.27	-1.1
3,272,543	+		Ga0059261_3130	0.27	-2.2
3,272,544	-		Ga0059261_3130	0.27	-0.3
3,272,585	+		Ga0059261_3130	0.30	+1.0
3,272,585	+		Ga0059261_3130	0.30	-0.5
3,272,586	-		Ga0059261_3130	0.30	+0.6
3,272,735	+				+1.0
3,272,735	+		Ga0059261_3130	0.40	-1.8
3,272,735	+		Ga0059261_3130	0.40	+0.1
3,272,736	-		Ga0059261_3130	0.40	+1.0
3,272,736	-		Ga0059261_3130	0.40	-0.7
3,272,802	-		Ga0059261_3130	0.45	+0.6
3,272,867	-		Ga0059261_3130	0.50	+0.1
3,272,867	-		Ga0059261_3130	0.50	+1.6
3,272,957	+		Ga0059261_3130	0.56	-0.6
3,273,036	-		Ga0059261_3130	0.61	-0.3
3,273,036	-		Ga0059261_3130	0.61	-0.3
3,273,036	-		Ga0059261_3130	0.61	-0.4
3,273,036	-		Ga0059261_3130	0.61	+0.1
3,273,036	-		Ga0059261_3130	0.61	-0.3
3,273,050	+		Ga0059261_3130	0.62	+1.4
3,273,056	+		Ga0059261_3130	0.63	+1.2
3,273,056	+		Ga0059261_3130	0.63	+0.3
3,273,057	-		Ga0059261_3130	0.63	+0.3
3,273,057	-		Ga0059261_3130	0.63	+0.7
3,273,057	-		Ga0059261_3130	0.63	+0.1
3,273,057	-		Ga0059261_3130	0.63	+1.4
3,273,079	+		Ga0059261_3130	0.64	-0.1
3,273,079	+		Ga0059261_3130	0.64	+0.3
3,273,079	+		Ga0059261_3130	0.64	+0.3
3,273,080	-		Ga0059261_3130	0.64	+0.7