Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2858

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
2,968,412	+				+0.6
2,968,413	-		Ga0059261_2857	0.68	+0.2
2,968,414	+		Ga0059261_2857	0.68	-0.9
2,968,414	+		Ga0059261_2857	0.68	+1.0
2,968,414	+		Ga0059261_2857	0.68	+0.2
2,968,414	+		Ga0059261_2857	0.68	+0.0
2,968,414	+		Ga0059261_2857	0.68	-0.3
2,968,414	+		Ga0059261_2857	0.68	-0.6
2,968,414	+				-0.6
2,968,414	+		Ga0059261_2857	0.68	+0.1
2,968,414	+		Ga0059261_2857	0.68	+1.2
2,968,414	+		Ga0059261_2857	0.68	-1.0
2,968,415	-		Ga0059261_2857	0.68	+0.8
2,968,415	-		Ga0059261_2857	0.68	+0.7
2,968,415	-		Ga0059261_2857	0.68	+0.0
2,968,415	-		Ga0059261_2857	0.68	+1.3
2,968,500	+		Ga0059261_2857	0.72	+1.2
2,968,550	-		Ga0059261_2857	0.74	-0.7
2,968,558	+		Ga0059261_2857	0.75	+1.6
2,968,559	-		Ga0059261_2857	0.75	+0.9
2,968,559	-		Ga0059261_2857	0.75	+0.0
2,968,636	+		Ga0059261_2857	0.78	+0.5
2,968,637	-		Ga0059261_2857	0.78	-0.4
2,968,637	-		Ga0059261_2857	0.78	+0.8
2,968,637	-				+1.0
2,968,718	+				+0.6
2,968,718	+		Ga0059261_2857	0.82	+0.4
2,968,719	-		Ga0059261_2857	0.82	+0.4
2,968,771	+		Ga0059261_2857	0.85	+0.3
2,968,772	-		Ga0059261_2857	0.85	-0.3
2,968,936	+				+0.1
2,968,969	+				+0.0
2,968,969	+				+0.3
2,968,969	+				+0.4
2,969,086	-				-0.7
2,969,086	-				-2.2
2,969,165	+				+0.7
2,969,165	+				+0.3
2,969,166	-				-0.3
2,969,194	+				-0.7
2,969,194	+				-0.3
2,969,194	+				+0.1
2,969,195	-				+0.0
2,969,195	-				+0.2
2,969,215	+				+0.7
2,969,215	+				+0.3
2,969,216	-				-0.4
2,969,216	-				+0.3
2,969,216	-				+1.5
2,969,216	-				+2.3
2,969,272	+				+2.0
2,969,613	+		Ga0059261_2858	0.41	+0.7
2,969,613	+		Ga0059261_2858	0.41	+0.5
2,969,613	+		Ga0059261_2858	0.41	+0.7
2,969,613	+		Ga0059261_2858	0.41	-0.1
2,969,614	-		Ga0059261_2858	0.41	+0.5
2,969,614	-		Ga0059261_2858	0.41	-0.5
2,969,614	-		Ga0059261_2858	0.41	+0.3
2,969,614	-		Ga0059261_2858	0.41	+0.1
2,969,619	+		Ga0059261_2858	0.42	+0.7
2,969,620	-		Ga0059261_2858	0.42	-0.1
2,969,620	-		Ga0059261_2858	0.42	+0.0
2,969,620	-		Ga0059261_2858	0.42	+0.8
2,970,015	+				-0.6
2,970,015	+				+0.1
2,970,015	+				-0.4
2,970,015	+				+0.2
2,970,015	+				-0.3
2,970,015	+				-1.3
2,970,015	+				+0.6
2,970,016	-				-0.0
2,970,016	-				-0.2
2,970,016	-				-1.0
2,970,016	-				-0.6
2,970,177	+				-0.1
2,970,177	+				-0.3
2,970,178	-				-0.7
2,970,194	+				+1.0
2,970,194	+				-0.5
2,970,195	-				-0.0
2,970,195	-				+1.0
2,970,347	+		Ga0059261_2859	0.23	+0.3
2,970,348	-				+2.6
2,970,528	+		Ga0059261_2859	0.38	-0.1
2,970,528	+		Ga0059261_2859	0.38	-0.1
2,970,528	+		Ga0059261_2859	0.38	-0.3
2,970,528	+		Ga0059261_2859	0.38	-0.2
2,970,528	+		Ga0059261_2859	0.38	-0.9
2,970,528	+		Ga0059261_2859	0.38	+0.7
2,970,528	+		Ga0059261_2859	0.38	-0.5
2,970,528	+		Ga0059261_2859	0.38	-0.3
2,970,528	+		Ga0059261_2859	0.38	-0.3
2,970,528	+		Ga0059261_2859	0.38	-0.6
2,970,528	+		Ga0059261_2859	0.38	+0.0
2,970,528	+		Ga0059261_2859	0.38	+0.1
2,970,528	+		Ga0059261_2859	0.38	+0.1
2,970,529	-		Ga0059261_2859	0.38	+0.4
2,970,529	-		Ga0059261_2859	0.38	+0.5
2,970,529	-		Ga0059261_2859	0.38	+0.1
2,970,529	-		Ga0059261_2859	0.38	+0.3
2,970,529	-		Ga0059261_2859	0.38	+0.5
2,970,529	-		Ga0059261_2859	0.38	+0.4
2,970,529	-		Ga0059261_2859	0.38	-0.1
2,970,530	+		Ga0059261_2859	0.38	+0.2
2,970,531	-		Ga0059261_2859	0.38	+0.6
2,970,531	-		Ga0059261_2859	0.38	+0.3
2,970,531	-		Ga0059261_2859	0.38	-0.2
2,970,531	-		Ga0059261_2859	0.38	+0.2
2,970,531	-		Ga0059261_2859	0.38	-1.2
2,970,531	-		Ga0059261_2859	0.38	+0.3
2,970,531	-		Ga0059261_2859	0.38	+0.4
2,970,531	-		Ga0059261_2859	0.38	-0.8
2,970,531	-		Ga0059261_2859	0.38	-0.0
2,970,879	-		Ga0059261_2859	0.68	+0.1
2,970,960	+		Ga0059261_2859	0.75	-0.6
2,970,961	+				+0.0
2,970,962	-		Ga0059261_2859	0.75	+0.1
2,970,962	-		Ga0059261_2859	0.75	+0.8
2,970,962	-		Ga0059261_2859	0.75	-0.5
2,970,966	+		Ga0059261_2859	0.75	-0.9
2,970,966	+		Ga0059261_2859	0.75	+0.5
2,970,966	+		Ga0059261_2859	0.75	-0.6
2,970,967	-		Ga0059261_2859	0.75	-0.4