Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2707

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
2,819,837	+		Ga0059261_2705	0.88	-0.8
2,819,837	+		Ga0059261_2705	0.88	-0.5
2,819,838	-		Ga0059261_2705	0.88	-0.4
2,820,056	+				+1.1
2,820,056	+				-0.4
2,820,056	+				-0.1
2,820,056	+				+0.2
2,820,056	+				-0.2
2,820,056	+				-1.3
2,820,056	+				-0.2
2,820,057	-				+0.1
2,820,057	-				+0.5
2,820,057	-				+1.0
2,820,088	+				-0.2
2,820,088	+				-0.6
2,820,088	+				+1.1
2,820,088	+				-0.3
2,820,089	-				-0.3
2,820,089	-				+0.3
2,820,089	-				-0.4
2,820,214	+		Ga0059261_2706	0.15	+0.1
2,820,214	+		Ga0059261_2706	0.15	+0.7
2,820,214	+		Ga0059261_2706	0.15	+0.0
2,820,215	-		Ga0059261_2706	0.15	-0.1
2,820,215	-		Ga0059261_2706	0.15	+0.5
2,820,215	-		Ga0059261_2706	0.15	+0.5
2,820,275	-		Ga0059261_2706	0.23	-0.9
2,820,311	+		Ga0059261_2706	0.28	-0.4
2,820,311	+		Ga0059261_2706	0.28	-0.1
2,820,312	-		Ga0059261_2706	0.28	-0.4
2,820,312	-		Ga0059261_2706	0.28	-0.9
2,820,449	+		Ga0059261_2706	0.48	-0.4
2,820,449	+		Ga0059261_2706	0.48	+0.2
2,820,450	-		Ga0059261_2706	0.48	+0.4
2,820,450	-		Ga0059261_2706	0.48	+0.2
2,820,450	-		Ga0059261_2706	0.48	+0.4
2,820,450	-		Ga0059261_2706	0.48	+0.8
2,820,721	+		Ga0059261_2706	0.86	+0.7
2,820,770	-				+0.7
2,820,770	-				+0.5
2,820,770	-				-0.1
2,820,778	+				-1.3
2,820,778	+				-0.0
2,820,778	+				-0.0
2,820,779	-				-0.8
2,820,779	-				-0.4
2,820,779	-				+0.1
2,820,779	-				-0.1
2,820,779	-				+0.7
2,821,007	+		Ga0059261_2707	0.18	-2.1
2,821,008	-		Ga0059261_2707	0.18	-1.5
2,821,008	-		Ga0059261_2707	0.18	-1.1
2,821,008	-		Ga0059261_2707	0.18	-0.9
2,821,155	+		Ga0059261_2707	0.33	-1.7
2,821,155	+		Ga0059261_2707	0.33	-1.3
2,821,156	-		Ga0059261_2707	0.33	-1.5
2,821,156	-		Ga0059261_2707	0.33	-2.6
2,821,157	+		Ga0059261_2707	0.34	-1.7
2,821,157	+		Ga0059261_2707	0.34	-1.2
2,821,157	+		Ga0059261_2707	0.34	-1.7
2,821,157	+				-0.9
2,821,157	+				+1.1
2,821,157	+		Ga0059261_2707	0.34	-0.5
2,821,157	+				+1.1
2,821,157	+		Ga0059261_2707	0.34	-2.3
2,821,157	+		Ga0059261_2707	0.34	+0.1
2,821,157	+		Ga0059261_2707	0.34	-0.5
2,821,158	-		Ga0059261_2707	0.34	-0.5
2,821,158	-		Ga0059261_2707	0.34	+0.1
2,821,158	-		Ga0059261_2707	0.34	-0.7
2,821,158	-		Ga0059261_2707	0.34	-1.8
2,821,158	-		Ga0059261_2707	0.34	-1.5
2,821,416	+		Ga0059261_2707	0.60	-0.9
2,821,416	+		Ga0059261_2707	0.60	-0.9
2,821,416	+		Ga0059261_2707	0.60	-2.1
2,821,416	+		Ga0059261_2707	0.60	-0.5
2,821,416	+		Ga0059261_2707	0.60	-0.5
2,821,417	-		Ga0059261_2707	0.60	-1.3
2,821,418	+		Ga0059261_2707	0.60	-1.3
2,821,418	+		Ga0059261_2707	0.60	-0.3
2,821,418	+		Ga0059261_2707	0.60	-1.5
2,821,418	+		Ga0059261_2707	0.60	-2.9
2,821,418	+		Ga0059261_2707	0.60	+2.1
2,821,418	+		Ga0059261_2707	0.60	+2.1
2,821,418	+		Ga0059261_2707	0.60	-3.0
2,821,419	-		Ga0059261_2707	0.61	-0.7
2,821,419	-		Ga0059261_2707	0.61	-1.7
2,821,419	-		Ga0059261_2707	0.61	+0.1
2,821,419	-		Ga0059261_2707	0.61	-0.9
2,821,419	-				+0.1
2,821,419	-		Ga0059261_2707	0.61	-1.5
2,821,419	-		Ga0059261_2707	0.61	-0.9
2,821,419	-		Ga0059261_2707	0.61	-2.6
2,821,419	-		Ga0059261_2707	0.61	+0.1
2,821,580	+				-0.5
2,821,580	+		Ga0059261_2707	0.77	-1.3
2,821,580	+		Ga0059261_2707	0.77	+1.6
2,821,581	-		Ga0059261_2707	0.77	-3.0
2,821,581	-		Ga0059261_2707	0.77	+0.1
2,821,581	-		Ga0059261_2707	0.77	-1.3
2,821,581	-		Ga0059261_2707	0.77	-1.9
2,821,637	+		Ga0059261_2707	0.83	-0.5
2,821,637	+		Ga0059261_2707	0.83	+1.1
2,821,637	+		Ga0059261_2707	0.83	+0.1
2,821,638	-		Ga0059261_2707	0.83	-2.5
2,821,638	-		Ga0059261_2707	0.83	+1.1
2,821,638	-		Ga0059261_2707	0.83	+1.1
2,821,638	-		Ga0059261_2707	0.83	-1.7
2,821,638	-		Ga0059261_2707	0.83	-0.5
2,821,638	-		Ga0059261_2707	0.83	-0.9
2,821,638	-		Ga0059261_2707	0.83	-2.4
2,821,940	+				+0.6
2,821,940	+				+0.1
2,821,940	+				-0.3
2,821,941	-				+0.5
2,821,941	-				+0.4
2,822,020	+		Ga0059261_2708	0.16	-0.5
2,822,020	+		Ga0059261_2708	0.16	+0.8
2,822,020	+		Ga0059261_2708	0.16	-0.4
2,822,186	+		Ga0059261_2708	0.67	+0.3
2,822,186	+		Ga0059261_2708	0.67	-1.1
2,822,186	+		Ga0059261_2708	0.67	+1.8
2,822,186	+		Ga0059261_2708	0.67	+0.6
2,822,187	-		Ga0059261_2708	0.67	+0.1
2,822,187	-		Ga0059261_2708	0.67	+0.8
2,822,317	+				-0.2
2,822,317	+				+0.6
2,822,343	-				+0.1
2,822,343	-				+0.3
2,822,375	+				+0.9
2,822,376	-				-0.9
2,822,376	-				+0.2
2,822,416	-		Ga0059261_2709	0.19	-0.6
2,822,416	-		Ga0059261_2709	0.19	-0.5
2,822,508	+		Ga0059261_2709	0.45	-0.1
2,822,508	+		Ga0059261_2709	0.45	-0.2
2,822,508	+		Ga0059261_2709	0.45	+0.2
2,822,508	+		Ga0059261_2709	0.45	+0.4
2,822,509	-		Ga0059261_2709	0.46	+0.6
2,822,543	+		Ga0059261_2709	0.55	+0.2