Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2461

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
2,543,007	+				+0.4
2,543,008	-				-0.0
2,543,042	+				-0.9
2,543,043	-				-0.3
2,543,043	-				-0.2
2,543,043	-				+0.9
2,543,081	+				+0.6
2,543,081	+				-0.3
2,543,081	+				+0.6
2,543,081	+				-0.7
2,543,081	+				-2.0
2,543,187	+		Ga0059261_2460	0.16	-0.3
2,543,187	+		Ga0059261_2460	0.16	-0.6
2,543,188	-		Ga0059261_2460	0.16	+0.9
2,543,188	-		Ga0059261_2460	0.16	+0.1
2,543,196	+		Ga0059261_2460	0.17	+0.1
2,543,196	+		Ga0059261_2460	0.17	+0.2
2,543,197	-		Ga0059261_2460	0.17	+0.5
2,543,197	-		Ga0059261_2460	0.17	-1.0
2,543,248	+		Ga0059261_2460	0.23	+0.2
2,543,248	+		Ga0059261_2460	0.23	-1.1
2,543,248	+		Ga0059261_2460	0.23	-0.2
2,543,249	-		Ga0059261_2460	0.23	+0.1
2,543,249	-		Ga0059261_2460	0.23	+0.1
2,543,249	-		Ga0059261_2460	0.23	+0.2
2,543,249	-		Ga0059261_2460	0.23	-0.5
2,543,249	-		Ga0059261_2460	0.23	+1.0
2,543,249	-		Ga0059261_2460	0.23	+0.3
2,543,345	+		Ga0059261_2460	0.33	-0.3
2,543,345	+		Ga0059261_2460	0.33	-0.4
2,543,345	+		Ga0059261_2460	0.33	-0.0
2,543,345	+		Ga0059261_2460	0.33	-0.6
2,543,345	+		Ga0059261_2460	0.33	+0.5
2,543,346	-		Ga0059261_2460	0.33	-0.8
2,543,346	-		Ga0059261_2460	0.33	+0.3
2,543,346	-		Ga0059261_2460	0.33	-0.2
2,543,480	+		Ga0059261_2460	0.48	+1.1
2,543,481	-		Ga0059261_2460	0.48	+0.3
2,543,481	-		Ga0059261_2460	0.48	+1.1
2,543,481	-		Ga0059261_2460	0.48	-0.0
2,543,481	-		Ga0059261_2460	0.48	-0.9
2,543,481	-		Ga0059261_2460	0.48	+0.4
2,543,481	-		Ga0059261_2460	0.48	-0.6
2,543,481	-		Ga0059261_2460	0.48	-0.3
2,543,481	-		Ga0059261_2460	0.48	+0.1
2,543,481	-		Ga0059261_2460	0.48	+0.4
2,543,481	-		Ga0059261_2460	0.48	-0.7
2,543,651	+		Ga0059261_2460	0.67	+0.1
2,543,651	+		Ga0059261_2460	0.67	+0.0
2,543,651	+		Ga0059261_2460	0.67	+0.4
2,543,651	+		Ga0059261_2460	0.67	+0.8
2,543,651	+		Ga0059261_2460	0.67	-0.4
2,543,652	-		Ga0059261_2460	0.67	+0.6
2,543,652	-		Ga0059261_2460	0.67	+0.5
2,543,652	-		Ga0059261_2460	0.67	+0.1
2,543,778	+		Ga0059261_2460	0.80	+1.0
2,543,798	+		Ga0059261_2460	0.83	-0.3
2,543,798	+		Ga0059261_2460	0.83	-0.6
2,543,798	+		Ga0059261_2460	0.83	-0.3
2,543,798	+		Ga0059261_2460	0.83	-0.3
2,543,798	+		Ga0059261_2460	0.83	-0.8
2,543,798	+		Ga0059261_2460	0.83	+0.4
2,543,798	+		Ga0059261_2460	0.83	-0.0
2,543,798	+		Ga0059261_2460	0.83	+0.4
2,543,798	+		Ga0059261_2460	0.83	-0.7
2,543,798	+		Ga0059261_2460	0.83	+0.6
2,543,798	+		Ga0059261_2460	0.83	-0.7
2,543,799	-		Ga0059261_2460	0.83	-0.1
2,543,799	-		Ga0059261_2460	0.83	-0.4
2,543,799	-		Ga0059261_2460	0.83	-0.2
2,543,799	-		Ga0059261_2460	0.83	-1.6
2,543,799	-		Ga0059261_2460	0.83	-0.9
2,543,799	-		Ga0059261_2460	0.83	+0.3
2,543,949	+				-1.7
2,543,949	+				+0.3
2,543,949	+				+0.3
2,543,949	+				-0.1
2,543,949	+				-0.1
2,543,949	+				-1.5
2,543,949	+				+0.2
2,543,949	+				+0.8
2,543,949	+				-1.1
2,543,949	+				-0.0
2,543,949	+				+0.2
2,543,949	+				-0.1
2,543,949	+				-0.3
2,543,949	+				+0.6
2,543,949	+				-1.2
2,543,949	+				-0.1
2,543,949	+				-0.8
2,543,949	+				+0.0
2,543,950	-				-0.1
2,543,950	-				+0.0
2,543,950	-				+0.4
2,543,950	-				+0.2
2,543,950	-				-1.0
2,543,950	-				-0.2
2,544,011	+				+0.2
2,544,011	+				+0.1
2,544,011	+				-0.3
2,544,011	+				+0.3
2,544,011	+				-0.9
2,544,011	+				+0.5
2,544,012	-				+0.2
2,544,012	-				+0.9
2,544,012	-				+0.1
2,544,012	-				-1.4
2,544,012	-				+0.1
2,544,012	-				+1.0
2,544,012	-				-1.0
2,544,017	+				+1.0
2,544,017	+				+0.1
2,544,018	-				+0.4
2,544,018	-				-1.1
2,544,101	+		Ga0059261_2461	0.25	-0.5
2,544,101	+		Ga0059261_2461	0.25	+0.4
2,544,101	+		Ga0059261_2461	0.25	+0.4
2,544,101	+		Ga0059261_2461	0.25	-2.0
2,544,101	+		Ga0059261_2461	0.25	-0.8
2,544,101	+		Ga0059261_2461	0.25	-0.8
2,544,102	-		Ga0059261_2461	0.25	-0.1
2,544,102	-		Ga0059261_2461	0.25	+1.0
2,544,102	-		Ga0059261_2461	0.25	-0.5
2,544,102	-		Ga0059261_2461	0.25	-0.2
2,544,102	-		Ga0059261_2461	0.25	-0.6
2,544,113	+		Ga0059261_2461	0.28	-1.8
2,544,125	+		Ga0059261_2461	0.31	-0.0
2,544,125	+		Ga0059261_2461	0.31	-0.2
2,544,126	-		Ga0059261_2461	0.31	-1.0
2,544,194	+		Ga0059261_2461	0.46	-0.6
2,544,195	-		Ga0059261_2461	0.47	-0.8
2,544,195	-		Ga0059261_2461	0.47	+0.0
2,544,195	-		Ga0059261_2461	0.47	+0.4
2,544,209	+		Ga0059261_2461	0.50	-0.1
2,544,498	+		Ga0059261_2462	0.45	+0.5
2,544,498	+		Ga0059261_2462	0.45	+0.1
2,544,498	+		Ga0059261_2462	0.45	+0.3
2,544,498	+		Ga0059261_2462	0.45	-0.2
2,544,499	-		Ga0059261_2462	0.46	-1.3
2,544,499	-		Ga0059261_2462	0.46	-0.7
2,544,499	-		Ga0059261_2462	0.46	-0.6
2,544,499	-		Ga0059261_2462	0.46	-0.6
2,544,499	-		Ga0059261_2462	0.46	+0.1
2,544,655	+				-1.1
2,544,655	+				+0.1
2,544,745	-				+0.4
2,544,746	+				+1.0
2,544,746	+				-0.5
2,544,747	-				-0.3
2,544,747	-				-0.4
2,544,872	+		Ga0059261_2463	0.13	-0.2
2,544,872	+		Ga0059261_2463	0.13	-0.9
2,544,907	+		Ga0059261_2463	0.15	+0.1
2,544,907	+		Ga0059261_2463	0.15	+0.4
2,544,907	+				-0.9
2,544,907	+		Ga0059261_2463	0.15	-0.1
2,544,908	-		Ga0059261_2463	0.15	+0.3
2,544,908	-		Ga0059261_2463	0.15	+0.9
2,544,908	-		Ga0059261_2463	0.15	+0.3
2,544,908	-		Ga0059261_2463	0.15	+0.3
2,544,908	-		Ga0059261_2463	0.15	-0.2
2,544,908	-		Ga0059261_2463	0.15	-0.0
2,544,908	-		Ga0059261_2463	0.15	+0.1
2,544,956	+		Ga0059261_2463	0.18	+0.4
2,544,956	+		Ga0059261_2463	0.18	-0.2
2,544,957	-		Ga0059261_2463	0.18	+0.8
2,544,957	-		Ga0059261_2463	0.18	+0.6
2,544,957	-		Ga0059261_2463	0.18	-1.2
2,545,028	+		Ga0059261_2463	0.23	+0.3
2,545,028	+		Ga0059261_2463	0.23	+0.9
2,545,028	+		Ga0059261_2463	0.23	-0.1
2,545,028	+		Ga0059261_2463	0.23	-0.2
2,545,028	+		Ga0059261_2463	0.23	-0.0
2,545,028	+		Ga0059261_2463	0.23	-0.2
2,545,028	+		Ga0059261_2463	0.23	-0.9
2,545,028	+		Ga0059261_2463	0.23	+1.1
2,545,028	+		Ga0059261_2463	0.23	+0.6
2,545,029	-		Ga0059261_2463	0.23	+0.6
2,545,029	-		Ga0059261_2463	0.23	+0.3
2,545,029	-		Ga0059261_2463	0.23	+0.4
2,545,029	-		Ga0059261_2463	0.23	+0.4
2,545,029	-		Ga0059261_2463	0.23	+1.3
2,545,029	-		Ga0059261_2463	0.23	+0.1
2,545,029	-		Ga0059261_2463	0.23	-0.5
2,545,029	-		Ga0059261_2463	0.23	+0.8
2,545,029	-		Ga0059261_2463	0.23	-0.4
2,545,029	-		Ga0059261_2463	0.23	+0.2
2,545,029	-		Ga0059261_2463	0.23	+3.1
2,545,029	-		Ga0059261_2463	0.23	-0.5
2,545,029	-		Ga0059261_2463	0.23	+0.0
2,545,073	+		Ga0059261_2463	0.26	-0.3
2,545,073	+		Ga0059261_2463	0.26	-0.7
2,545,073	+		Ga0059261_2463	0.26	+0.0
2,545,073	+		Ga0059261_2463	0.26	-1.2
2,545,073	+		Ga0059261_2463	0.26	+0.4
2,545,073	+		Ga0059261_2463	0.26	-0.1
2,545,073	+		Ga0059261_2463	0.26	-0.2
2,545,073	+		Ga0059261_2463	0.26	+0.3
2,545,073	+		Ga0059261_2463	0.26	+0.2
2,545,073	+		Ga0059261_2463	0.26	+0.5
2,545,073	+		Ga0059261_2463	0.26	-0.5
2,545,073	+		Ga0059261_2463	0.26	+0.4
2,545,074	-		Ga0059261_2463	0.26	-0.2
2,545,074	-		Ga0059261_2463	0.26	-0.5
2,545,074	-		Ga0059261_2463	0.26	-0.6
2,545,191	+		Ga0059261_2463	0.34	+0.3
2,545,194	+		Ga0059261_2463	0.34	-0.7
2,545,194	+		Ga0059261_2463	0.34	-0.0
2,545,194	+		Ga0059261_2463	0.34	-0.5
2,545,195	-		Ga0059261_2463	0.34	+0.5
2,545,195	-		Ga0059261_2463	0.34	+0.5
2,545,195	-		Ga0059261_2463	0.34	+0.3
2,545,195	-		Ga0059261_2463	0.34	-0.1
2,545,195	-		Ga0059261_2463	0.34	+0.8
2,545,195	-		Ga0059261_2463	0.34	+0.2
2,545,195	-		Ga0059261_2463	0.34	-0.1
2,545,195	-		Ga0059261_2463	0.34	-0.8
2,545,196	+		Ga0059261_2463	0.34	-0.7
2,545,196	+		Ga0059261_2463	0.34	-0.3
2,545,196	+		Ga0059261_2463	0.34	-0.1
2,545,196	+		Ga0059261_2463	0.34	-1.0
2,545,197	-		Ga0059261_2463	0.34	+1.0
2,545,197	-		Ga0059261_2463	0.34	-0.5
2,545,197	-		Ga0059261_2463	0.34	-0.8
2,545,197	-		Ga0059261_2463	0.34	-0.8
2,545,276	-		Ga0059261_2463	0.39	-0.1
2,545,277	+		Ga0059261_2463	0.39	-0.9
2,545,277	+		Ga0059261_2463	0.39	+0.3
2,545,277	+		Ga0059261_2463	0.39	-1.5
2,545,277	+		Ga0059261_2463	0.39	-0.2
2,545,277	+				+1.1
2,545,277	+		Ga0059261_2463	0.39	-0.9
2,545,277	+		Ga0059261_2463	0.39	-0.0
2,545,277	+		Ga0059261_2463	0.39	-0.6
2,545,277	+		Ga0059261_2463	0.39	+0.1
2,545,278	-		Ga0059261_2463	0.39	+0.7
2,545,278	-		Ga0059261_2463	0.39	+0.0
2,545,278	-		Ga0059261_2463	0.39	+0.2
2,545,278	-		Ga0059261_2463	0.39	+0.2
2,545,278	-		Ga0059261_2463	0.39	-0.2
2,545,278	-		Ga0059261_2463	0.39	+0.1
2,545,278	-		Ga0059261_2463	0.39	-0.5
2,545,278	-		Ga0059261_2463	0.39	+0.3
2,545,278	-		Ga0059261_2463	0.39	+0.2
2,545,286	+		Ga0059261_2463	0.40	+0.8
2,545,286	+		Ga0059261_2463	0.40	+1.4
2,545,286	+				-1.7
2,545,286	+		Ga0059261_2463	0.40	-0.4
2,545,286	+		Ga0059261_2463	0.40	+0.3
2,545,287	-		Ga0059261_2463	0.40	-1.0
2,545,287	-		Ga0059261_2463	0.40	-0.7
2,545,287	-		Ga0059261_2463	0.40	+1.1
2,545,287	-				+0.5
2,545,287	-		Ga0059261_2463	0.40	+0.5
2,545,346	+		Ga0059261_2463	0.44	-0.7
2,545,346	+		Ga0059261_2463	0.44	+0.7
2,545,346	+		Ga0059261_2463	0.44	+0.4
2,545,347	-		Ga0059261_2463	0.44	+0.1
2,545,347	-				+1.1
2,545,347	-		Ga0059261_2463	0.44	+0.4
2,545,347	-		Ga0059261_2463	0.44	-0.6
2,545,404	+		Ga0059261_2463	0.48	+1.1
2,545,404	+		Ga0059261_2463	0.48	+0.4