Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2293 and Ga0059261_2294 overlap by 4 nucleotides Ga0059261_2294 and Ga0059261_2295 overlap by 1 nucleotides Ga0059261_2295 and Ga0059261_2296 overlap by 8 nucleotides Ga0059261_2296 and Ga0059261_2297 are separated by 31 nucleotides
Ga0059261_2293: Ga0059261_2293 - cell division ATP-binding protein FtsE, at 2,396,872 to 2,397,579
_2293
Ga0059261_2294: Ga0059261_2294 - Cell division protein, at 2,397,576 to 2,398,466
_2294
Ga0059261_2295: Ga0059261_2295 - DUF218 domain, at 2,398,466 to 2,399,014
_2295
Ga0059261_2296: Ga0059261_2296 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,399,007 to 2,399,693
_2296
Ga0059261_2297: Ga0059261_2297 - Predicted integral membrane protein, at 2,399,725 to 2,400,210
_2297
Position (kb)
2398
2399
2400 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2397.553 kb on + strand at 2397.633 kb on - strand at 2398.250 kb on + strand, within Ga0059261_2294 at 2398.251 kb on - strand, within Ga0059261_2294 at 2398.274 kb on + strand, within Ga0059261_2294 at 2398.684 kb on - strand, within Ga0059261_2295 at 2398.684 kb on - strand, within Ga0059261_2295 at 2398.768 kb on + strand, within Ga0059261_2295 at 2398.817 kb on + strand, within Ga0059261_2295 at 2398.817 kb on + strand, within Ga0059261_2295 at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.968 kb on - strand at 2399.049 kb on + strand at 2399.121 kb on + strand at 2399.122 kb on - strand at 2399.794 kb on + strand, within Ga0059261_2297 at 2399.794 kb on + strand, within Ga0059261_2297 at 2399.794 kb on + strand, within Ga0059261_2297 at 2399.795 kb on - strand, within Ga0059261_2297 at 2399.795 kb on - strand, within Ga0059261_2297 at 2400.007 kb on + strand, within Ga0059261_2297 at 2400.007 kb on + strand, within Ga0059261_2297 at 2400.007 kb on + strand, within Ga0059261_2297 at 2400.007 kb on + strand, within Ga0059261_2297 at 2400.007 kb on + strand, within Ga0059261_2297 at 2400.007 kb on + strand, within Ga0059261_2297 at 2400.008 kb on - strand, within Ga0059261_2297 at 2400.008 kb on - strand, within Ga0059261_2297 at 2400.008 kb on - strand, within Ga0059261_2297 at 2400.008 kb on - strand, within Ga0059261_2297 at 2400.008 kb on - strand, within Ga0059261_2297 at 2400.008 kb on - strand, within Ga0059261_2297
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.001 mg/ml remove 2,397,553 + -0.2 2,397,633 - -0.3 2,398,250 + Ga0059261_2294 0.76 -0.1 2,398,251 - Ga0059261_2294 0.76 -1.4 2,398,274 + Ga0059261_2294 0.78 +0.4 2,398,684 - Ga0059261_2295 0.40 -2.7 2,398,684 - Ga0059261_2295 0.40 -1.8 2,398,768 + Ga0059261_2295 0.55 -1.0 2,398,817 + Ga0059261_2295 0.64 -0.8 2,398,817 + Ga0059261_2295 0.64 -0.2 2,398,967 + -0.1 2,398,967 + -2.4 2,398,967 + -0.7 2,398,967 + +0.2 2,398,967 + -1.2 2,398,967 + -0.0 2,398,968 - +0.2 2,399,049 + +1.2 2,399,121 + +0.4 2,399,122 - +2.2 2,399,794 + Ga0059261_2297 0.14 +0.8 2,399,794 + Ga0059261_2297 0.14 +1.2 2,399,794 + Ga0059261_2297 0.14 +0.1 2,399,795 - Ga0059261_2297 0.14 +0.7 2,399,795 - Ga0059261_2297 0.14 -0.7 2,400,007 + Ga0059261_2297 0.58 -1.3 2,400,007 + Ga0059261_2297 0.58 -1.8 2,400,007 + Ga0059261_2297 0.58 -0.2 2,400,007 + Ga0059261_2297 0.58 +0.2 2,400,007 + Ga0059261_2297 0.58 -1.2 2,400,007 + Ga0059261_2297 0.58 +0.9 2,400,008 - Ga0059261_2297 0.58 +0.1 2,400,008 - Ga0059261_2297 0.58 -0.1 2,400,008 - Ga0059261_2297 0.58 +0.8 2,400,008 - Ga0059261_2297 0.58 +0.2 2,400,008 - Ga0059261_2297 0.58 -2.0 2,400,008 - Ga0059261_2297 0.58 -0.3
Or see this region's nucleotide sequence