Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2247

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
2,349,472	+				-1.8
2,349,472	+				-0.2
2,349,473	-				+0.2
2,349,473	-				-0.8
2,349,532	+				-1.3
2,349,532	+				+1.7
2,349,532	+				+0.8
2,349,532	+				+0.6
2,349,533	-				-0.3
2,349,533	-				-0.8
2,349,533	-				+0.0
2,349,533	-				+2.2
2,349,541	+				-0.1
2,349,541	+				-0.3
2,349,541	+				-0.2
2,349,541	+				-0.1
2,349,541	+				+0.6
2,349,541	+				+0.4
2,349,541	+				-0.0
2,349,542	-				+0.2
2,349,542	-				+0.2
2,349,542	-				+0.2
2,349,542	-				-0.5
2,349,590	-				+0.2
2,349,590	-				+0.0
2,349,590	-				+0.1
2,349,625	+				+0.5
2,349,626	-				+0.4
2,349,654	-				-0.9
2,349,674	-				-1.1
2,349,674	-				-0.0
2,349,674	-				-1.4
2,349,688	+				+0.1
2,349,688	+				+0.2
2,349,688	+				+0.4
2,349,688	+				-1.4
2,349,688	+				+1.3
2,349,688	+				+0.0
2,349,688	+				-0.2
2,349,688	+				-0.6
2,349,689	-				+0.5
2,349,689	-				-0.6
2,349,689	-				-0.5
2,349,772	+		Ga0059261_2246	0.12	-0.1
2,349,773	-		Ga0059261_2246	0.12	-0.7
2,349,967	+		Ga0059261_2246	0.40	+0.6
2,349,967	+		Ga0059261_2246	0.40	+0.2
2,349,967	+		Ga0059261_2246	0.40	+0.2
2,349,989	+				-0.4
2,349,989	+		Ga0059261_2246	0.43	+0.4
2,349,989	+		Ga0059261_2246	0.43	-0.5
2,349,989	+		Ga0059261_2246	0.43	+0.8
2,349,989	+		Ga0059261_2246	0.43	+0.8
2,349,990	-		Ga0059261_2246	0.43	+0.3
2,349,990	-		Ga0059261_2246	0.43	+1.6
2,349,990	-		Ga0059261_2246	0.43	-0.1
2,349,990	-		Ga0059261_2246	0.43	-0.0
2,349,990	-		Ga0059261_2246	0.43	+0.9
2,349,990	-		Ga0059261_2246	0.43	+1.4
2,349,990	-		Ga0059261_2246	0.43	-0.8
2,349,990	-		Ga0059261_2246	0.43	+0.6
2,349,990	-		Ga0059261_2246	0.43	+1.1
2,349,990	-		Ga0059261_2246	0.43	-0.2
2,349,990	-		Ga0059261_2246	0.43	-0.2
2,349,990	-				+0.2
2,349,990	-		Ga0059261_2246	0.43	+0.7
2,349,990	-		Ga0059261_2246	0.43	-2.6
2,349,990	-		Ga0059261_2246	0.43	+0.5
2,349,990	-		Ga0059261_2246	0.43	+0.2
2,349,992	-		Ga0059261_2246	0.43	-0.2
2,349,992	-		Ga0059261_2246	0.43	-1.0
2,349,992	-		Ga0059261_2246	0.43	-0.9
2,350,006	+		Ga0059261_2246	0.45	-0.7
2,350,144	+		Ga0059261_2246	0.65	-0.7
2,350,145	-		Ga0059261_2246	0.65	+0.2
2,350,159	-		Ga0059261_2246	0.67	-2.2
2,350,186	+		Ga0059261_2246	0.71	-0.0
2,350,195	+		Ga0059261_2246	0.72	-2.7
2,350,195	+		Ga0059261_2246	0.72	+0.2
2,350,195	+		Ga0059261_2246	0.72	+1.2
2,350,196	-		Ga0059261_2246	0.73	-0.8
2,350,196	-		Ga0059261_2246	0.73	-0.8
2,350,196	-				+1.5
2,350,267	+		Ga0059261_2246	0.83	-0.3
2,350,267	+		Ga0059261_2246	0.83	+0.4
2,350,267	+		Ga0059261_2246	0.83	-0.9
2,350,267	+		Ga0059261_2246	0.83	+0.1
2,350,267	+				+0.7
2,350,267	+		Ga0059261_2246	0.83	-1.9
2,350,267	+		Ga0059261_2246	0.83	+0.9
2,350,267	+		Ga0059261_2246	0.83	-0.9
2,350,267	+		Ga0059261_2246	0.83	-1.2
2,350,267	+		Ga0059261_2246	0.83	+0.5
2,350,267	+		Ga0059261_2246	0.83	+0.3
2,350,268	-		Ga0059261_2246	0.83	+0.0
2,350,268	-		Ga0059261_2246	0.83	-0.7
2,350,268	-		Ga0059261_2246	0.83	-0.1
2,350,268	-		Ga0059261_2246	0.83	+0.6
2,350,268	-		Ga0059261_2246	0.83	+0.5
2,350,268	-		Ga0059261_2246	0.83	+0.6
2,350,379	+				+2.2
2,350,379	+				+0.1
2,350,379	+				+1.3
2,350,380	-				+1.0
2,350,400	+				-0.0
2,350,400	+				-0.1
2,350,400	+				+0.0
2,350,400	+				+0.5
2,350,401	-				-0.3
2,350,545	+				-0.4
2,350,545	+				-0.3
2,350,545	+				+0.6
2,350,546	-				-1.0
2,350,546	-				-2.2
2,350,584	+		Ga0059261_2247	0.13	-0.7
2,350,585	+		Ga0059261_2247	0.13	+0.2
2,350,585	+		Ga0059261_2247	0.13	-0.2
2,350,585	+		Ga0059261_2247	0.13	-0.7
2,350,585	+		Ga0059261_2247	0.13	+0.0
2,350,586	-		Ga0059261_2247	0.13	-0.7
2,350,586	-		Ga0059261_2247	0.13	-1.0
2,350,586	-		Ga0059261_2247	0.13	-0.0
2,350,587	+		Ga0059261_2247	0.13	-0.7
2,350,587	+		Ga0059261_2247	0.13	+0.3
2,350,587	+		Ga0059261_2247	0.13	-0.6
2,350,587	+		Ga0059261_2247	0.13	-0.3
2,350,587	+		Ga0059261_2247	0.13	-1.2
2,350,587	+		Ga0059261_2247	0.13	-1.0
2,350,588	-		Ga0059261_2247	0.13	+0.4
2,350,588	-		Ga0059261_2247	0.13	-1.5
2,350,588	-		Ga0059261_2247	0.13	-2.3
2,350,674	+		Ga0059261_2247	0.21	+0.4
2,350,674	+				-2.0
2,350,675	-		Ga0059261_2247	0.21	-0.4
2,350,812	+		Ga0059261_2247	0.33	+0.6
2,350,813	-		Ga0059261_2247	0.33	-1.2
2,350,813	-		Ga0059261_2247	0.33	+0.4
2,350,813	-		Ga0059261_2247	0.33	-0.5
2,350,813	-		Ga0059261_2247	0.33	+0.4
2,350,813	-		Ga0059261_2247	0.33	-0.9
2,350,813	-				-0.4
2,350,813	-		Ga0059261_2247	0.33	-0.4
2,350,813	-		Ga0059261_2247	0.33	-1.3
2,350,887	+		Ga0059261_2247	0.40	-0.8
2,350,887	+		Ga0059261_2247	0.40	-0.4
2,350,887	+		Ga0059261_2247	0.40	-1.4
2,350,888	-		Ga0059261_2247	0.40	-0.1
2,350,888	-		Ga0059261_2247	0.40	-1.1
2,350,888	-		Ga0059261_2247	0.40	+0.2
2,350,888	-		Ga0059261_2247	0.40	-0.7
2,351,204	+		Ga0059261_2247	0.69	-0.8
2,351,421	+		Ga0059261_2247	0.88	-0.8
2,351,421	+		Ga0059261_2247	0.88	-1.1
2,351,421	+		Ga0059261_2247	0.88	-0.1
2,351,421	+		Ga0059261_2247	0.88	+0.4
2,351,421	+		Ga0059261_2247	0.88	-0.6
2,351,422	-		Ga0059261_2247	0.88	+0.1
2,351,432	+		Ga0059261_2247	0.89	-0.8
2,351,432	+		Ga0059261_2247	0.89	-0.4
2,351,432	+		Ga0059261_2247	0.89	-1.0
2,351,433	-		Ga0059261_2247	0.89	-1.2
2,351,551	+				-0.7
2,351,551	+				-0.5
2,351,552	-				-0.5
2,351,552	-				-0.1
2,351,640	+				-0.2
2,351,641	-				-0.4