Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1878

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,988,820	-		Ga0059261_1877	0.69	-0.4
1,988,820	-		Ga0059261_1877	0.69	-0.7
1,988,996	+		Ga0059261_1877	0.74	-0.4
1,988,996	+		Ga0059261_1877	0.74	-0.1
1,988,996	+		Ga0059261_1877	0.74	-0.5
1,988,996	+		Ga0059261_1877	0.74	-0.2
1,988,996	+		Ga0059261_1877	0.74	-0.5
1,988,996	+		Ga0059261_1877	0.74	-0.1
1,988,997	-		Ga0059261_1877	0.74	+0.1
1,988,997	-		Ga0059261_1877	0.74	-0.2
1,988,997	-		Ga0059261_1877	0.74	-0.3
1,989,203	+		Ga0059261_1877	0.81	+1.1
1,989,203	+		Ga0059261_1877	0.81	-1.7
1,989,203	+		Ga0059261_1877	0.81	+0.8
1,989,204	-		Ga0059261_1877	0.81	-1.0
1,989,312	+		Ga0059261_1877	0.84	+0.3
1,989,312	+		Ga0059261_1877	0.84	+0.3
1,989,312	+		Ga0059261_1877	0.84	-0.1
1,989,313	-		Ga0059261_1877	0.84	-0.3
1,989,313	-		Ga0059261_1877	0.84	-1.2
1,989,313	-		Ga0059261_1877	0.84	+0.1
1,989,313	-		Ga0059261_1877	0.84	-0.8
1,989,323	+		Ga0059261_1877	0.85	-0.1
1,989,323	+		Ga0059261_1877	0.85	-1.5
1,989,323	+		Ga0059261_1877	0.85	+0.1
1,989,323	+				+0.8
1,989,324	-		Ga0059261_1877	0.85	-0.0
1,989,324	-		Ga0059261_1877	0.85	+1.1
1,989,324	-		Ga0059261_1877	0.85	+0.1
1,989,324	-		Ga0059261_1877	0.85	+0.1
1,989,803	+				-0.7
1,989,803	+				+0.4
1,989,803	+				-0.5
1,989,803	+				+0.4
1,989,803	+				+0.1
1,989,803	+				+0.1
1,989,803	+				+0.1
1,989,803	+				+0.5
1,989,804	-				+0.3
1,989,804	-				-0.2
1,989,804	-				-0.8
1,989,804	-				+0.1
1,989,810	+				-0.1
1,989,810	+				-1.9
1,989,810	+				-2.2
1,989,810	+				-0.0
1,989,811	-				-0.0
1,989,811	-				-0.0
1,989,811	-				+0.1
1,989,811	-				+0.7
1,989,811	-				+0.7
1,989,811	-				-0.7
1,989,921	+				-0.9
1,989,921	+				-0.9
1,989,922	-				+0.5
1,989,998	+		Ga0059261_1878	0.15	-0.6
1,989,998	+		Ga0059261_1878	0.15	-0.5
1,989,998	+		Ga0059261_1878	0.15	-0.2
1,989,998	+		Ga0059261_1878	0.15	-0.6
1,989,998	+		Ga0059261_1878	0.15	-0.2
1,989,999	-		Ga0059261_1878	0.15	-1.2
1,989,999	-		Ga0059261_1878	0.15	-0.6
1,989,999	-		Ga0059261_1878	0.15	-0.8
1,989,999	-		Ga0059261_1878	0.15	-0.1
1,990,115	+		Ga0059261_1878	0.24	+0.1
1,990,115	+		Ga0059261_1878	0.24	-0.3
1,990,116	-		Ga0059261_1878	0.24	-1.1
1,990,116	-		Ga0059261_1878	0.24	-1.0
1,990,391	-		Ga0059261_1878	0.47	-1.1
1,990,690	+		Ga0059261_1878	0.72	-0.7
1,990,690	+		Ga0059261_1878	0.72	-0.1
1,990,938	+				-0.2
1,991,021	+				+0.7
1,991,021	+				-0.1
1,991,021	+				-0.2
1,991,021	+				-1.2
1,991,021	+				-1.5
1,991,021	+				+0.4
1,991,021	+				+0.7
1,991,021	+				+1.1
1,991,021	+				+0.3
1,991,021	+				-0.3
1,991,022	-				-0.3
1,991,022	-				-0.4
1,991,022	-				-2.9
1,991,022	-				+0.2
1,991,049	+				-0.1
1,991,049	+				+1.4
1,991,050	-				+0.2
1,991,095	-				+0.2
1,991,304	+				+0.0
1,991,305	+				+0.1
1,991,305	+				-0.2
1,991,305	+				-0.7
1,991,306	-				-0.1
1,991,306	-				-1.7
1,991,309	-				+0.2
1,991,389	-		Ga0059261_1879	0.36	-0.8
1,991,392	+				-1.5
1,991,392	+		Ga0059261_1879	0.38	-0.5
1,991,393	-		Ga0059261_1879	0.38	-0.4
1,991,480	+		Ga0059261_1879	0.71	+0.4
1,991,480	+		Ga0059261_1879	0.71	+1.8
1,991,480	+		Ga0059261_1879	0.71	+0.5
1,991,480	+		Ga0059261_1879	0.71	-0.8
1,991,480	+		Ga0059261_1879	0.71	+0.6
1,991,480	+		Ga0059261_1879	0.71	-0.1
1,991,480	+		Ga0059261_1879	0.71	-0.9
1,991,480	+		Ga0059261_1879	0.71	-0.7
1,991,480	+		Ga0059261_1879	0.71	-0.6
1,991,480	+		Ga0059261_1879	0.71	-0.5
1,991,481	-		Ga0059261_1879	0.72	-0.3
1,991,481	-		Ga0059261_1879	0.72	+1.1
1,991,481	-		Ga0059261_1879	0.72	-0.1
1,991,481	-		Ga0059261_1879	0.72	+0.1
1,991,481	-		Ga0059261_1879	0.72	+0.6
1,991,481	-		Ga0059261_1879	0.72	+0.2
1,991,481	-		Ga0059261_1879	0.72	-2.1
1,991,481	-		Ga0059261_1879	0.72	+0.4
1,991,481	-		Ga0059261_1879	0.72	+0.0
1,991,481	-		Ga0059261_1879	0.72	+1.3
1,991,482	+		Ga0059261_1879	0.72	-0.0
1,991,483	-		Ga0059261_1879	0.72	-0.5
1,991,483	-		Ga0059261_1879	0.72	-0.2
1,991,523	-		Ga0059261_1879	0.88	-1.1
1,991,523	-		Ga0059261_1879	0.88	+0.2
1,991,523	-		Ga0059261_1879	0.88	+0.6
1,991,556	+				+0.5
1,991,557	-				-0.1
1,991,557	-				-0.6
1,991,646	-				+0.6
1,991,948	+		Ga0059261_1880	0.42	-0.6
1,991,948	+		Ga0059261_1880	0.42	-0.1
1,991,948	+		Ga0059261_1880	0.42	-1.2
1,991,949	-		Ga0059261_1880	0.43	+0.2
1,991,954	+		Ga0059261_1880	0.43	-1.4
1,991,954	+		Ga0059261_1880	0.43	-0.0
1,991,988	-		Ga0059261_1880	0.48	+0.1