Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1860

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,971,125	+				+0.4
1,971,126	-				+0.2
1,971,126	-				-0.1
1,971,126	-				+0.3
1,971,298	+				-0.7
1,971,298	+				+1.4
1,971,299	-				-0.3
1,971,299	-				-1.5
1,971,299	-				-0.5
1,971,460	+		Ga0059261_1859	0.11	-1.1
1,971,461	-		Ga0059261_1859	0.11	+1.0
1,971,461	-		Ga0059261_1859	0.11	+0.6
1,971,461	-		Ga0059261_1859	0.11	+1.1
1,971,461	-		Ga0059261_1859	0.11	-1.6
1,971,461	-		Ga0059261_1859	0.11	+0.5
1,971,563	+		Ga0059261_1859	0.44	-0.6
1,971,563	+		Ga0059261_1859	0.44	+0.3
1,971,564	-		Ga0059261_1859	0.44	+0.3
1,971,564	-		Ga0059261_1859	0.44	-0.2
1,971,596	+		Ga0059261_1859	0.54	-0.1
1,971,596	+		Ga0059261_1859	0.54	+0.7
1,971,596	+		Ga0059261_1859	0.54	+0.1
1,971,596	+		Ga0059261_1859	0.54	-0.4
1,971,596	+				+1.1
1,971,597	-		Ga0059261_1859	0.55	-0.9
1,971,597	-		Ga0059261_1859	0.55	+0.3
1,971,647	-		Ga0059261_1859	0.70	-0.1
1,971,649	-		Ga0059261_1859	0.71	+0.9
1,971,672	+		Ga0059261_1859	0.78	-0.4
1,971,672	+		Ga0059261_1859	0.78	+1.1
1,971,673	-		Ga0059261_1859	0.79	-0.2
1,971,782	+				+0.1
1,971,782	+				-0.2
1,971,783	-				-0.3
1,971,886	+				+1.1
1,971,887	-				-0.2
1,972,623	+		Ga0059261_1860	0.88	+1.8
1,972,623	+		Ga0059261_1860	0.88	-1.4
1,972,623	+		Ga0059261_1860	0.88	+0.8
1,972,666	+				-2.1
1,972,666	+				+0.8
1,972,666	+				+0.1
1,972,666	+				+0.0
1,972,666	+				+1.3
1,972,666	+				-0.2
1,972,666	+				+0.6
1,972,666	+				-0.2
1,972,666	+				+1.1
1,972,666	+				-0.3
1,972,695	+				+0.5
1,972,695	+				+0.3
1,972,695	+				-0.8
1,972,695	+				-0.3
1,972,695	+				+0.4
1,972,696	-				-0.6
1,972,696	-				+0.7
1,972,696	-				-0.6
1,972,696	-				+0.5
1,972,696	-				-0.2
1,972,698	+				-0.6
1,972,698	+				-0.8
1,972,698	+				-0.7
1,972,699	-				-0.8
1,972,699	-				+0.5
1,972,699	-				+0.5
1,972,721	+				-0.8
1,972,722	-				+0.1
1,972,722	-				-1.5
1,972,722	-				+0.8
1,972,792	+				+0.4
1,972,792	+				-1.0
1,972,792	+				-1.8
1,972,792	+				+0.8
1,972,792	+				+0.5
1,972,792	+				+0.6
1,972,793	-				-0.4
1,972,793	-				+0.1
1,972,793	-				+1.1
1,972,793	-				-0.4
1,972,795	-				-0.8
1,972,795	-				+0.1
1,972,795	-				+0.1
1,972,841	+				+0.2
1,972,841	+				+0.2
1,972,841	+				+0.1
1,972,842	-				-0.2
1,972,842	-				+0.8
1,972,845	+				-0.1
1,972,845	+				-1.4
1,972,845	+				+1.7
1,972,845	+				-0.1
1,972,845	+				-0.8
1,972,845	+				+0.8
1,972,846	-				-0.2
1,972,846	-				-1.7
1,972,846	-				-0.9
1,972,846	-				+1.0
1,972,854	+		Ga0059261_1861	0.10	-0.8
1,972,854	+		Ga0059261_1861	0.10	+0.4
1,972,854	+		Ga0059261_1861	0.10	+0.2
1,972,854	+		Ga0059261_1861	0.10	-0.8
1,972,855	-		Ga0059261_1861	0.10	-1.8
1,972,966	+		Ga0059261_1861	0.17	+0.1
1,972,966	+		Ga0059261_1861	0.17	+1.1
1,972,966	+		Ga0059261_1861	0.17	-0.9
1,972,967	-		Ga0059261_1861	0.17	-0.3
1,972,967	-		Ga0059261_1861	0.17	-0.1
1,972,967	-		Ga0059261_1861	0.17	-0.8
1,972,967	-		Ga0059261_1861	0.17	+0.5
1,972,967	-		Ga0059261_1861	0.17	+0.3
1,972,968	+		Ga0059261_1861	0.17	-0.5
1,972,968	+		Ga0059261_1861	0.17	-0.3
1,972,968	+		Ga0059261_1861	0.17	-0.5
1,972,968	+		Ga0059261_1861	0.17	-0.1
1,972,968	+		Ga0059261_1861	0.17	-1.7
1,972,968	+		Ga0059261_1861	0.17	+0.5
1,972,969	-		Ga0059261_1861	0.17	+0.1
1,972,969	-		Ga0059261_1861	0.17	+0.2
1,972,969	-		Ga0059261_1861	0.17	+0.0
1,972,969	-		Ga0059261_1861	0.17	+0.1
1,972,969	-		Ga0059261_1861	0.17	+0.1
1,972,969	-		Ga0059261_1861	0.17	-0.3
1,972,969	-		Ga0059261_1861	0.17	-0.2
1,972,973	+		Ga0059261_1861	0.17	+0.1
1,972,973	+		Ga0059261_1861	0.17	+0.9
1,972,973	+		Ga0059261_1861	0.17	+1.0
1,972,973	+		Ga0059261_1861	0.17	+0.0
1,972,973	+		Ga0059261_1861	0.17	-0.7
1,972,973	+		Ga0059261_1861	0.17	-2.2
1,972,973	+		Ga0059261_1861	0.17	+0.8
1,972,973	+		Ga0059261_1861	0.17	+0.1
1,972,974	-		Ga0059261_1861	0.18	+1.1
1,972,974	-		Ga0059261_1861	0.18	-0.6
1,972,974	-		Ga0059261_1861	0.18	+1.1
1,972,974	-		Ga0059261_1861	0.18	+0.9
1,972,974	-		Ga0059261_1861	0.18	-0.2
1,972,974	-		Ga0059261_1861	0.18	-0.5
1,972,974	-		Ga0059261_1861	0.18	+0.3
1,973,072	+		Ga0059261_1861	0.23	-0.9
1,973,073	-		Ga0059261_1861	0.24	-0.2
1,973,086	+		Ga0059261_1861	0.24	+0.7
1,973,087	-		Ga0059261_1861	0.24	+1.7
1,973,106	+		Ga0059261_1861	0.26	-0.1
1,973,107	-		Ga0059261_1861	0.26	+0.4
1,973,250	+		Ga0059261_1861	0.34	-1.3
1,973,251	-		Ga0059261_1861	0.34	-1.9
1,973,251	-		Ga0059261_1861	0.34	-0.0
1,973,251	-		Ga0059261_1861	0.34	-0.1
1,973,419	+		Ga0059261_1861	0.45	-0.0
1,973,425	+		Ga0059261_1861	0.45	+0.1
1,973,425	+		Ga0059261_1861	0.45	-0.4
1,973,425	+		Ga0059261_1861	0.45	-0.5
1,973,425	+		Ga0059261_1861	0.45	-0.1
1,973,425	+		Ga0059261_1861	0.45	+0.0
1,973,425	+		Ga0059261_1861	0.45	-0.1
1,973,425	+		Ga0059261_1861	0.45	-0.1
1,973,426	-		Ga0059261_1861	0.45	+0.3
1,973,426	-		Ga0059261_1861	0.45	+0.4
1,973,427	-		Ga0059261_1861	0.45	-1.2
1,973,547	+				-2.1
1,973,547	+		Ga0059261_1861	0.52	-1.1
1,973,547	+		Ga0059261_1861	0.52	+0.2
1,973,547	+		Ga0059261_1861	0.52	-0.8
1,973,547	+		Ga0059261_1861	0.52	+0.3
1,973,547	+		Ga0059261_1861	0.52	-1.0
1,973,548	-		Ga0059261_1861	0.52	+0.3
1,973,548	-		Ga0059261_1861	0.52	-0.4
1,973,548	-		Ga0059261_1861	0.52	-0.6
1,973,605	+		Ga0059261_1861	0.56	+0.1
1,973,623	+		Ga0059261_1861	0.57	+0.4
1,973,623	+		Ga0059261_1861	0.57	-0.0
1,973,623	+		Ga0059261_1861	0.57	-0.5
1,973,623	+		Ga0059261_1861	0.57	+0.1
1,973,623	+		Ga0059261_1861	0.57	-1.1
1,973,623	+		Ga0059261_1861	0.57	+0.9
1,973,624	-				+0.1
1,973,624	-		Ga0059261_1861	0.57	-0.2
1,973,624	-		Ga0059261_1861	0.57	-1.1