Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1769 and Ga0059261_1770 are separated by 121 nucleotides Ga0059261_1770 and Ga0059261_1771 are separated by 2 nucleotides Ga0059261_1771 and Ga0059261_1772 are separated by 139 nucleotides
Ga0059261_1769: Ga0059261_1769 - hypothetical protein, at 1,875,816 to 1,876,274
_1769
Ga0059261_1770: Ga0059261_1770 - hypothetical protein, at 1,876,396 to 1,877,022
_1770
Ga0059261_1771: Ga0059261_1771 - hypothetical protein, at 1,877,025 to 1,877,546
_1771
Ga0059261_1772: Ga0059261_1772 - MobA/MobL family, at 1,877,686 to 1,879,497
_1772
Position (kb) 1877
1878 Strain fitness (log2 ratio) -1
0
1 at 1876.063 kb on + strand, within Ga0059261_1769 at 1876.117 kb on + strand, within Ga0059261_1769 at 1876.117 kb on + strand, within Ga0059261_1769 at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.118 kb on - strand at 1876.118 kb on - strand, within Ga0059261_1769 at 1876.138 kb on + strand, within Ga0059261_1769 at 1876.138 kb on + strand, within Ga0059261_1769 at 1876.138 kb on + strand, within Ga0059261_1769 at 1876.138 kb on + strand, within Ga0059261_1769 at 1876.138 kb on + strand, within Ga0059261_1769 at 1876.139 kb on - strand, within Ga0059261_1769 at 1877.687 kb on + strand at 1877.814 kb on + strand at 1877.815 kb on - strand at 1877.922 kb on - strand, within Ga0059261_1772 at 1877.922 kb on - strand, within Ga0059261_1772 at 1877.922 kb on - strand, within Ga0059261_1772
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.001 mg/ml remove 1,876,063 + Ga0059261_1769 0.54 -0.7 1,876,117 + Ga0059261_1769 0.66 +0.1 1,876,117 + Ga0059261_1769 0.66 +1.0 1,876,118 - Ga0059261_1769 0.66 -0.3 1,876,118 - Ga0059261_1769 0.66 -0.6 1,876,118 - Ga0059261_1769 0.66 -0.2 1,876,118 - Ga0059261_1769 0.66 +0.3 1,876,118 - Ga0059261_1769 0.66 -0.5 1,876,118 - Ga0059261_1769 0.66 +0.9 1,876,118 - Ga0059261_1769 0.66 -0.4 1,876,118 - Ga0059261_1769 0.66 -0.3 1,876,118 - -0.5 1,876,118 - Ga0059261_1769 0.66 +1.2 1,876,138 + Ga0059261_1769 0.70 -0.7 1,876,138 + Ga0059261_1769 0.70 +0.7 1,876,138 + Ga0059261_1769 0.70 +0.4 1,876,138 + Ga0059261_1769 0.70 +0.6 1,876,138 + Ga0059261_1769 0.70 +1.1 1,876,139 - Ga0059261_1769 0.70 +0.7 1,877,687 + +0.3 1,877,814 + -0.2 1,877,815 - -0.9 1,877,922 - Ga0059261_1772 0.13 +0.1 1,877,922 - Ga0059261_1772 0.13 -0.9 1,877,922 - Ga0059261_1772 0.13 -0.5
Or see this region's nucleotide sequence