Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1370

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,444,385	-		Ga0059261_1368	0.60	-0.7
1,444,421	-		Ga0059261_1368	0.71	+1.0
1,444,428	-		Ga0059261_1368	0.74	-1.1
1,444,428	-		Ga0059261_1368	0.74	+0.7
1,444,428	-		Ga0059261_1368	0.74	-0.7
1,444,527	+				-0.4
1,444,527	+				-0.3
1,444,527	+				-0.3
1,444,527	+				+1.0
1,444,527	+				-0.3
1,444,528	-				-0.6
1,444,603	+		Ga0059261_1369	0.11	-1.3
1,444,642	+		Ga0059261_1369	0.16	-1.2
1,444,642	+		Ga0059261_1369	0.16	-1.0
1,444,642	+		Ga0059261_1369	0.16	-1.0
1,444,642	+		Ga0059261_1369	0.16	-1.2
1,444,642	+				+1.8
1,444,643	-		Ga0059261_1369	0.17	-1.4
1,444,643	-		Ga0059261_1369	0.17	+0.0
1,444,643	-		Ga0059261_1369	0.17	+0.8
1,444,643	-		Ga0059261_1369	0.17	-0.7
1,444,663	+		Ga0059261_1369	0.20	-2.4
1,444,664	-		Ga0059261_1369	0.20	-0.7
1,444,664	-		Ga0059261_1369	0.20	+1.0
1,444,664	-		Ga0059261_1369	0.20	-2.0
1,444,664	-		Ga0059261_1369	0.20	-1.1
1,444,664	-				+1.4
1,444,822	+		Ga0059261_1369	0.43	-0.3
1,444,822	+		Ga0059261_1369	0.43	-0.3
1,444,822	+		Ga0059261_1369	0.43	-0.6
1,444,822	+		Ga0059261_1369	0.43	-2.3
1,444,822	+		Ga0059261_1369	0.43	-0.9
1,444,822	+		Ga0059261_1369	0.43	-1.2
1,444,823	-		Ga0059261_1369	0.43	+1.0
1,444,823	-		Ga0059261_1369	0.43	+1.4
1,444,823	-		Ga0059261_1369	0.43	-1.8
1,444,823	-		Ga0059261_1369	0.43	-0.7
1,444,823	-		Ga0059261_1369	0.43	+0.0
1,444,993	+		Ga0059261_1369	0.68	-2.6
1,444,993	+		Ga0059261_1369	0.68	-0.6
1,444,994	-		Ga0059261_1369	0.69	-1.4
1,445,008	+		Ga0059261_1369	0.71	-0.5
1,445,008	+		Ga0059261_1369	0.71	-1.6
1,445,008	+		Ga0059261_1369	0.71	-0.1
1,445,008	+		Ga0059261_1369	0.71	-0.2
1,445,008	+		Ga0059261_1369	0.71	-0.8
1,445,008	+		Ga0059261_1369	0.71	-0.6
1,445,009	-		Ga0059261_1369	0.71	-0.3
1,445,009	-		Ga0059261_1369	0.71	-0.1
1,445,009	-		Ga0059261_1369	0.71	-1.8
1,445,061	+		Ga0059261_1369	0.79	-1.2
1,445,065	+		Ga0059261_1369	0.79	-1.0
1,445,065	+		Ga0059261_1369	0.79	-1.3
1,445,065	+		Ga0059261_1369	0.79	-0.9
1,445,065	+		Ga0059261_1369	0.79	-2.0
1,445,065	+		Ga0059261_1369	0.79	-0.1
1,445,065	+		Ga0059261_1369	0.79	-0.4
1,445,065	+		Ga0059261_1369	0.79	-0.9
1,445,065	+		Ga0059261_1369	0.79	-0.8
1,445,066	-		Ga0059261_1369	0.79	-2.3
1,445,066	-		Ga0059261_1369	0.79	-2.0
1,445,066	-		Ga0059261_1369	0.79	-0.1
1,445,066	-		Ga0059261_1369	0.79	-0.6
1,445,170	+				-1.8
1,445,315	+				-0.8
1,445,315	+				-0.3
1,445,315	+				-0.1
1,445,316	-				-1.2
1,445,316	-				-0.8
1,445,316	-				-1.4
1,445,316	-				+0.3
1,445,460	-				-1.8
1,445,460	-				-0.7
1,445,460	-				-1.8
1,445,555	+		Ga0059261_1370	0.16	-0.7
1,445,555	+		Ga0059261_1370	0.16	-0.6
1,445,556	-		Ga0059261_1370	0.16	+0.2
1,445,567	+		Ga0059261_1370	0.17	-0.9
1,445,568	-		Ga0059261_1370	0.17	-0.7
1,445,591	+		Ga0059261_1370	0.19	-1.1
1,445,592	-		Ga0059261_1370	0.19	-0.3
1,445,592	-		Ga0059261_1370	0.19	-1.8
1,445,592	-		Ga0059261_1370	0.19	+0.0
1,445,672	+		Ga0059261_1370	0.25	-0.3
1,445,672	+		Ga0059261_1370	0.25	-2.4
1,445,673	-		Ga0059261_1370	0.25	-4.9
1,445,673	-		Ga0059261_1370	0.25	-0.4
1,445,820	+		Ga0059261_1370	0.36	-1.5
1,445,820	+		Ga0059261_1370	0.36	+0.7
1,445,820	+		Ga0059261_1370	0.36	+0.0
1,445,880	-		Ga0059261_1370	0.41	-2.4
1,445,904	+		Ga0059261_1370	0.43	-2.7
1,445,905	-		Ga0059261_1370	0.43	-1.3
1,445,905	-		Ga0059261_1370	0.43	-0.6
1,446,328	+		Ga0059261_1370	0.75	-0.6
1,446,329	-		Ga0059261_1370	0.75	-0.2
1,446,386	+		Ga0059261_1370	0.79	+0.1
1,446,386	+		Ga0059261_1370	0.79	-0.2
1,446,386	+		Ga0059261_1370	0.79	+0.3
1,446,564	+				-0.6
1,446,564	+				-1.4
1,446,576	-				-1.1
1,446,584	-				-0.1
1,446,584	-				+1.0
1,446,676	+				-1.5
1,446,676	+				-0.0
1,446,676	+				+0.2
1,446,676	+				-1.0
1,446,677	-				-0.2
1,446,677	-				-0.6
1,446,950	-				+0.3
1,447,041	+				-0.4
1,447,041	+				+0.1
1,447,042	-				-0.5
1,447,042	-				-0.2
1,447,042	-				+0.4
1,447,142	+		Ga0059261_1372	0.16	-0.6
1,447,142	+		Ga0059261_1372	0.16	+0.4
1,447,142	+		Ga0059261_1372	0.16	+0.4
1,447,143	-		Ga0059261_1372	0.16	+0.3
1,447,143	-		Ga0059261_1372	0.16	-2.0
1,447,143	-		Ga0059261_1372	0.16	+0.2
1,447,192	-		Ga0059261_1372	0.21	+0.1
1,447,192	-		Ga0059261_1372	0.21	-0.4
1,447,294	+		Ga0059261_1372	0.32	+0.3
1,447,372	-		Ga0059261_1372	0.40	-0.1
1,447,425	+		Ga0059261_1372	0.45	-0.7
1,447,425	+		Ga0059261_1372	0.45	-0.6
1,447,425	+		Ga0059261_1372	0.45	+0.7
1,447,425	+		Ga0059261_1372	0.45	+0.3
1,447,426	-		Ga0059261_1372	0.45	-0.5
1,447,426	-		Ga0059261_1372	0.45	+0.0
1,447,426	-				+0.0
1,447,461	+		Ga0059261_1372	0.49	+0.8
1,447,462	-		Ga0059261_1372	0.49	+0.8
1,447,548	+				+0.4
1,447,548	+		Ga0059261_1372	0.57	-1.8
1,447,548	+		Ga0059261_1372	0.57	+0.3
1,447,548	+		Ga0059261_1372	0.57	-0.6
1,447,549	-		Ga0059261_1372	0.57	-0.4
1,447,549	-		Ga0059261_1372	0.57	+0.7