Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1369

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,443,814	+		Ga0059261_1367	0.85	+0.1
1,443,814	+		Ga0059261_1367	0.85	+0.6
1,443,814	+		Ga0059261_1367	0.85	+0.5
1,443,814	+		Ga0059261_1367	0.85	+1.2
1,443,814	+		Ga0059261_1367	0.85	+0.4
1,443,814	+		Ga0059261_1367	0.85	+0.1
1,443,814	+		Ga0059261_1367	0.85	-1.0
1,443,814	+		Ga0059261_1367	0.85	+0.6
1,443,814	+		Ga0059261_1367	0.85	-0.4
1,443,814	+		Ga0059261_1367	0.85	+0.1
1,443,814	+		Ga0059261_1367	0.85	-0.5
1,443,814	+		Ga0059261_1367	0.85	-0.1
1,443,814	+		Ga0059261_1367	0.85	+0.2
1,443,815	-		Ga0059261_1367	0.85	-0.3
1,443,815	-		Ga0059261_1367	0.85	-0.2
1,443,815	-		Ga0059261_1367	0.85	+0.5
1,443,815	-		Ga0059261_1367	0.85	-1.2
1,443,815	-		Ga0059261_1367	0.85	-0.9
1,443,815	-		Ga0059261_1367	0.85	-0.1
1,443,815	-		Ga0059261_1367	0.85	+0.3
1,443,815	-		Ga0059261_1367	0.85	-0.7
1,443,815	-		Ga0059261_1367	0.85	-0.8
1,443,815	-		Ga0059261_1367	0.85	-0.1
1,443,815	-		Ga0059261_1367	0.85	-0.1
1,443,815	-		Ga0059261_1367	0.85	+0.0
1,443,815	-		Ga0059261_1367	0.85	-0.2
1,443,815	-		Ga0059261_1367	0.85	+0.0
1,443,815	-		Ga0059261_1367	0.85	-1.0
1,443,815	-		Ga0059261_1367	0.85	-0.4
1,443,815	-		Ga0059261_1367	0.85	-0.2
1,443,885	+		Ga0059261_1367	0.89	+0.1
1,443,885	+		Ga0059261_1367	0.89	+0.0
1,443,885	+		Ga0059261_1367	0.89	+2.6
1,443,886	-		Ga0059261_1367	0.89	+0.8
1,443,997	+				-0.1
1,443,997	+				+1.0
1,443,997	+				-0.1
1,443,997	+				-0.4
1,443,997	+				-0.8
1,443,997	+				-0.8
1,443,997	+				+0.2
1,443,997	+				+0.5
1,443,997	+				-0.3
1,443,997	+				+1.0
1,443,997	+				+0.2
1,443,997	+				-1.8
1,443,997	+				+1.7
1,443,997	+				+0.3
1,443,997	+				+0.6
1,443,997	+				+0.1
1,443,997	+				+0.3
1,443,997	+				+1.2
1,443,997	+				+0.0
1,443,998	-				+0.2
1,443,998	-				-1.0
1,443,998	-				+0.3
1,443,998	-				+0.3
1,443,998	-				-0.6
1,443,998	-				+0.7
1,443,998	-				-0.2
1,443,998	-				+0.8
1,443,998	-				+0.5
1,443,998	-				-0.1
1,443,998	-				-0.1
1,443,998	-				+0.1
1,443,998	-				+1.3
1,443,998	-				+0.0
1,443,998	-				+0.0
1,443,998	-				-0.6
1,443,998	-				+0.2
1,443,998	-				+0.2
1,443,998	-				-0.6
1,443,998	-				-0.1
1,443,998	-				-0.1
1,444,055	-				-0.7
1,444,055	-				-0.9
1,444,062	+				+0.6
1,444,062	+				-1.1
1,444,062	+				-0.1
1,444,062	+				-0.0
1,444,062	+				+0.9
1,444,063	-				-1.4
1,444,063	-				-0.7
1,444,063	-				+0.3
1,444,076	+				+1.9
1,444,076	+				-0.4
1,444,076	+				+0.6
1,444,077	-				+0.9
1,444,077	-				+0.0
1,444,077	-				-0.8
1,444,090	+				+0.0
1,444,137	+				+0.3
1,444,138	-				-0.1
1,444,138	-				-0.2
1,444,148	+				+0.6
1,444,148	+				-1.1
1,444,148	+				-0.4
1,444,148	+				-0.7
1,444,148	+				-1.3
1,444,148	+				-0.6
1,444,148	+				-0.8
1,444,148	+				-0.0
1,444,148	+				+0.1
1,444,149	-				+0.1
1,444,149	-				+1.4
1,444,149	-				-0.6
1,444,149	-				+0.4
1,444,149	-				-0.2
1,444,156	+				-0.6
1,444,157	-				+2.6
1,444,157	-				-2.2
1,444,185	+				+0.0
1,444,186	-				-1.6
1,444,186	-				+1.4
1,444,186	-				-0.4
1,444,186	-				-0.2
1,444,186	-				-0.8
1,444,385	-		Ga0059261_1368	0.60	-0.7
1,444,421	-		Ga0059261_1368	0.71	+1.0
1,444,428	-		Ga0059261_1368	0.74	-1.1
1,444,428	-		Ga0059261_1368	0.74	+0.7
1,444,428	-		Ga0059261_1368	0.74	-0.7
1,444,527	+				-0.4
1,444,527	+				-0.3
1,444,527	+				-0.3
1,444,527	+				+1.0
1,444,527	+				-0.3
1,444,528	-				-0.6
1,444,603	+		Ga0059261_1369	0.11	-1.3
1,444,642	+		Ga0059261_1369	0.16	-1.2
1,444,642	+		Ga0059261_1369	0.16	-1.0
1,444,642	+		Ga0059261_1369	0.16	-1.0
1,444,642	+		Ga0059261_1369	0.16	-1.2
1,444,642	+				+1.8
1,444,643	-		Ga0059261_1369	0.17	-1.4
1,444,643	-		Ga0059261_1369	0.17	+0.0
1,444,643	-		Ga0059261_1369	0.17	+0.8
1,444,643	-		Ga0059261_1369	0.17	-0.7
1,444,663	+		Ga0059261_1369	0.20	-2.4
1,444,664	-		Ga0059261_1369	0.20	-0.7
1,444,664	-		Ga0059261_1369	0.20	+1.0
1,444,664	-		Ga0059261_1369	0.20	-2.0
1,444,664	-		Ga0059261_1369	0.20	-1.1
1,444,664	-				+1.4
1,444,822	+		Ga0059261_1369	0.43	-0.3
1,444,822	+		Ga0059261_1369	0.43	-0.3
1,444,822	+		Ga0059261_1369	0.43	-0.6
1,444,822	+		Ga0059261_1369	0.43	-2.3
1,444,822	+		Ga0059261_1369	0.43	-0.9
1,444,822	+		Ga0059261_1369	0.43	-1.2
1,444,823	-		Ga0059261_1369	0.43	+1.0
1,444,823	-		Ga0059261_1369	0.43	+1.4
1,444,823	-		Ga0059261_1369	0.43	-1.8
1,444,823	-		Ga0059261_1369	0.43	-0.7
1,444,823	-		Ga0059261_1369	0.43	+0.0
1,444,993	+		Ga0059261_1369	0.68	-2.6
1,444,993	+		Ga0059261_1369	0.68	-0.6
1,444,994	-		Ga0059261_1369	0.69	-1.4
1,445,008	+		Ga0059261_1369	0.71	-0.5
1,445,008	+		Ga0059261_1369	0.71	-1.6
1,445,008	+		Ga0059261_1369	0.71	-0.1
1,445,008	+		Ga0059261_1369	0.71	-0.2
1,445,008	+		Ga0059261_1369	0.71	-0.8
1,445,008	+		Ga0059261_1369	0.71	-0.6
1,445,009	-		Ga0059261_1369	0.71	-0.3
1,445,009	-		Ga0059261_1369	0.71	-0.1
1,445,009	-		Ga0059261_1369	0.71	-1.8
1,445,061	+		Ga0059261_1369	0.79	-1.2
1,445,065	+		Ga0059261_1369	0.79	-1.0
1,445,065	+		Ga0059261_1369	0.79	-1.3
1,445,065	+		Ga0059261_1369	0.79	-0.9
1,445,065	+		Ga0059261_1369	0.79	-2.0
1,445,065	+		Ga0059261_1369	0.79	-0.1
1,445,065	+		Ga0059261_1369	0.79	-0.4
1,445,065	+		Ga0059261_1369	0.79	-0.9
1,445,065	+		Ga0059261_1369	0.79	-0.8
1,445,066	-		Ga0059261_1369	0.79	-2.3
1,445,066	-		Ga0059261_1369	0.79	-2.0
1,445,066	-		Ga0059261_1369	0.79	-0.1
1,445,066	-		Ga0059261_1369	0.79	-0.6
1,445,170	+				-1.8
1,445,315	+				-0.8
1,445,315	+				-0.3
1,445,315	+				-0.1
1,445,316	-				-1.2
1,445,316	-				-0.8
1,445,316	-				-1.4
1,445,316	-				+0.3
1,445,460	-				-1.8
1,445,460	-				-0.7
1,445,460	-				-1.8
1,445,555	+		Ga0059261_1370	0.16	-0.7
1,445,555	+		Ga0059261_1370	0.16	-0.6
1,445,556	-		Ga0059261_1370	0.16	+0.2
1,445,567	+		Ga0059261_1370	0.17	-0.9
1,445,568	-		Ga0059261_1370	0.17	-0.7
1,445,591	+		Ga0059261_1370	0.19	-1.1
1,445,592	-		Ga0059261_1370	0.19	-0.3
1,445,592	-		Ga0059261_1370	0.19	-1.8
1,445,592	-		Ga0059261_1370	0.19	+0.0
1,445,672	+		Ga0059261_1370	0.25	-0.3
1,445,672	+		Ga0059261_1370	0.25	-2.4
1,445,673	-		Ga0059261_1370	0.25	-4.9
1,445,673	-		Ga0059261_1370	0.25	-0.4
1,445,820	+		Ga0059261_1370	0.36	-1.5
1,445,820	+		Ga0059261_1370	0.36	+0.7
1,445,820	+		Ga0059261_1370	0.36	+0.0
1,445,880	-		Ga0059261_1370	0.41	-2.4
1,445,904	+		Ga0059261_1370	0.43	-2.7
1,445,905	-		Ga0059261_1370	0.43	-1.3
1,445,905	-		Ga0059261_1370	0.43	-0.6