Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1334

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,400,575	+				-0.1
1,400,575	+				-0.2
1,400,575	+				-0.6
1,400,575	+				-1.0
1,400,576	-				+1.0
1,400,576	-				-0.7
1,400,576	-				-0.3
1,400,576	-				+0.2
1,400,576	-				+0.5
1,400,595	+		Ga0059261_1333	0.11	-0.3
1,400,595	+		Ga0059261_1333	0.11	+0.0
1,400,596	-				+1.0
1,400,630	-		Ga0059261_1333	0.15	-0.3
1,400,807	+		Ga0059261_1333	0.33	+0.2
1,400,807	+		Ga0059261_1333	0.33	-0.2
1,400,807	+		Ga0059261_1333	0.33	+0.6
1,400,807	+		Ga0059261_1333	0.33	-0.8
1,400,808	-		Ga0059261_1333	0.34	-1.2
1,400,904	-		Ga0059261_1333	0.44	+0.9
1,400,929	+		Ga0059261_1333	0.46	+0.8
1,400,929	+		Ga0059261_1333	0.46	-0.3
1,400,930	-		Ga0059261_1333	0.46	+0.3
1,400,930	-		Ga0059261_1333	0.46	+1.0
1,401,075	+		Ga0059261_1333	0.61	-0.1
1,401,075	+		Ga0059261_1333	0.61	-0.3
1,401,075	+		Ga0059261_1333	0.61	-0.1
1,401,076	-		Ga0059261_1333	0.62	+0.6
1,401,076	-		Ga0059261_1333	0.62	+0.3
1,401,076	-		Ga0059261_1333	0.62	-1.0
1,401,309	+		Ga0059261_1333	0.86	-0.1
1,401,309	+		Ga0059261_1333	0.86	-0.9
1,401,309	+		Ga0059261_1333	0.86	+0.1
1,401,309	+		Ga0059261_1333	0.86	+0.5
1,401,309	+		Ga0059261_1333	0.86	-0.6
1,401,309	+		Ga0059261_1333	0.86	+0.0
1,401,310	-		Ga0059261_1333	0.86	-0.2
1,401,310	-		Ga0059261_1333	0.86	+0.3
1,401,310	-		Ga0059261_1333	0.86	-0.9
1,401,310	-		Ga0059261_1333	0.86	-0.8
1,401,310	-		Ga0059261_1333	0.86	+0.4
1,401,390	+				+1.6
1,401,390	+				+0.3
1,401,390	+				+0.4
1,401,391	-				+0.8
1,401,391	-				-0.3
1,401,391	-				-0.6
1,401,391	-				+0.4
1,401,393	+				+0.3
1,401,393	+				+0.4
1,401,393	+				-1.0
1,401,393	+				+0.3
1,401,393	+				+1.6
1,401,393	+				-1.3
1,401,393	+				+0.2
1,401,393	+				-1.2
1,401,393	+				+0.3
1,401,393	+				-0.7
1,401,394	-				+0.6
1,401,394	-				+0.8
1,401,657	+		Ga0059261_1334	0.47	+0.7
1,401,657	+		Ga0059261_1334	0.47	+0.7
1,401,657	+		Ga0059261_1334	0.47	-0.2
1,401,657	+		Ga0059261_1334	0.47	-1.3
1,401,657	+		Ga0059261_1334	0.47	+0.6
1,401,657	+		Ga0059261_1334	0.47	+0.1
1,401,658	-		Ga0059261_1334	0.47	+0.8
1,401,658	-		Ga0059261_1334	0.47	-1.8
1,401,658	-		Ga0059261_1334	0.47	+0.5
1,401,658	-		Ga0059261_1334	0.47	+0.6
1,401,658	-		Ga0059261_1334	0.47	+0.2
1,401,895	+				-0.9
1,401,895	+				-0.4
1,401,895	+				+0.7
1,401,895	+				+0.2
1,401,895	+				+0.4
1,401,896	-				+0.7
1,401,896	-				+0.5
1,401,896	-				+0.2
1,401,896	-				-0.8
1,401,896	-				-0.6
1,401,896	-				+0.3
1,401,896	-				+0.4
1,401,896	-				+0.9
1,402,034	+		Ga0059261_1335	0.12	-1.6
1,402,034	+		Ga0059261_1335	0.12	+1.0
1,402,035	-		Ga0059261_1335	0.12	+1.0
1,402,081	+		Ga0059261_1335	0.16	+0.7
1,402,081	+		Ga0059261_1335	0.16	-0.8
1,402,081	+				+1.0
1,402,081	+		Ga0059261_1335	0.16	+0.0
1,402,081	+		Ga0059261_1335	0.16	+0.3
1,402,082	-				+3.0
1,402,082	-				+1.0
1,402,082	-		Ga0059261_1335	0.17	+0.8
1,402,409	-		Ga0059261_1335	0.46	+1.3
1,402,409	-		Ga0059261_1335	0.46	+1.0
1,402,601	-		Ga0059261_1335	0.63	-0.1
1,402,742	-		Ga0059261_1335	0.76	+0.3
1,402,853	-		Ga0059261_1335	0.86	+0.0
1,402,853	-		Ga0059261_1335	0.86	+0.6
1,402,853	-		Ga0059261_1335	0.86	-1.3