Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1311

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,376,290	+		Ga0059261_1309	0.75	-0.5
1,376,291	-				+1.3
1,376,291	-		Ga0059261_1309	0.75	+0.2
1,376,492	-		Ga0059261_1309	0.87	+0.7
1,376,492	-		Ga0059261_1309	0.87	-0.5
1,376,617	+				-0.3
1,376,617	+				-1.8
1,376,617	+				+0.4
1,376,617	+				+0.3
1,376,617	+				+1.4
1,376,618	-				+0.1
1,376,618	-				+1.4
1,376,618	-				-0.3
1,376,618	-				+0.3
1,376,618	-				+0.4
1,376,652	+				+0.0
1,376,652	+				+0.2
1,376,653	-				+0.0
1,376,686	+				+0.2
1,376,686	+				-0.8
1,376,687	-				-0.1
1,376,687	-				-0.5
1,376,687	-				-0.2
1,376,687	-				+1.6
1,376,687	-				-0.5
1,376,716	+				-2.2
1,376,716	+				+0.9
1,376,722	+				+0.2
1,376,722	+				-0.4
1,376,722	+				-0.2
1,376,722	+				+0.1
1,376,722	+				+0.1
1,376,723	-				-1.2
1,376,723	-				+0.4
1,376,723	-				+0.5
1,376,723	-				-0.0
1,376,723	-				+0.8
1,376,789	+				-0.1
1,376,789	+				-0.5
1,376,790	-				-0.6
1,376,790	-				+0.1
1,376,790	-				-0.6
1,376,790	-				-0.3
1,376,790	-				-0.8
1,376,903	-		Ga0059261_1310	0.15	+0.7
1,376,925	+		Ga0059261_1310	0.21	+0.4
1,376,926	-		Ga0059261_1310	0.22	+0.8
1,376,926	-		Ga0059261_1310	0.22	+0.4
1,377,018	+		Ga0059261_1310	0.47	+0.3
1,377,018	+		Ga0059261_1310	0.47	-0.3
1,377,018	+		Ga0059261_1310	0.47	+0.1
1,377,018	+		Ga0059261_1310	0.47	+0.2
1,377,019	-		Ga0059261_1310	0.48	+1.9
1,377,042	+		Ga0059261_1310	0.54	+1.0
1,377,043	-		Ga0059261_1310	0.54	+0.4
1,377,171	+				-0.5
1,377,171	+				+1.6
1,377,214	-				+0.5
1,377,217	-				-0.3
1,377,241	+				-1.0
1,377,263	+				+0.5
1,377,263	+				+0.1
1,377,448	+		Ga0059261_1311	0.32	-0.4
1,377,448	+		Ga0059261_1311	0.32	-0.2
1,377,448	+		Ga0059261_1311	0.32	+0.4
1,377,449	-		Ga0059261_1311	0.32	+0.5
1,377,449	-		Ga0059261_1311	0.32	+1.0
1,377,449	-		Ga0059261_1311	0.32	-1.3
1,377,524	+		Ga0059261_1311	0.44	+0.0
1,377,524	+		Ga0059261_1311	0.44	-1.0
1,377,524	-		Ga0059261_1311	0.44	-0.6
1,377,638	-		Ga0059261_1311	0.63	-1.0
1,377,930	-				+0.0
1,377,950	+				+0.1
1,377,950	+				+0.3
1,377,950	+				+1.0
1,377,951	-				-0.8
1,377,951	-				+0.0
1,377,951	-				-0.2
1,377,951	-				+0.1
1,377,951	-				-1.2
1,377,997	+				-0.9
1,378,038	+				+0.3
1,378,038	+				-0.0
1,378,038	+				-0.3
1,378,038	+				+0.7
1,378,038	+				+0.3
1,378,038	+				-1.3
1,378,039	-				-1.1
1,378,039	-				-0.1
1,378,042	+				-0.9
1,378,042	+				-1.3
1,378,042	+				-1.4
1,378,042	+				-0.6
1,378,043	-				-1.0
1,378,043	-				-0.9
1,378,082	-				+0.3
1,378,203	+				+1.0
1,378,203	+				+0.0
1,378,203	+				-2.6
1,378,204	-				-1.6
1,378,204	-				-0.8
1,378,204	-				-1.0
1,378,243	-		Ga0059261_1312	0.10	-2.0
1,378,243	-		Ga0059261_1312	0.10	-0.7
1,378,245	+		Ga0059261_1312	0.11	-1.6
1,378,245	+				-0.6
1,378,273	-				+2.0
1,378,320	+		Ga0059261_1312	0.15	-1.0
1,378,321	-		Ga0059261_1312	0.15	+1.0
1,378,330	-		Ga0059261_1312	0.16	-0.8
1,378,331	+				+0.4
1,378,331	+		Ga0059261_1312	0.16	-0.2
1,378,332	-		Ga0059261_1312	0.16	-0.2
1,378,332	-		Ga0059261_1312	0.16	-0.2
1,378,344	+		Ga0059261_1312	0.17	+1.3
1,378,345	-		Ga0059261_1312	0.17	-0.8
1,378,573	-		Ga0059261_1312	0.31	-0.4
1,378,607	+		Ga0059261_1312	0.33	-0.2
1,378,608	-				-0.6
1,378,617	+		Ga0059261_1312	0.34	-2.5
1,378,617	+		Ga0059261_1312	0.34	-2.2
1,378,618	-		Ga0059261_1312	0.34	+1.7
1,378,665	+				-0.3