Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0929 and Ga0059261_0930 overlap by 4 nucleotides Ga0059261_0930 and Ga0059261_0931 overlap by 4 nucleotides Ga0059261_0931 and Ga0059261_0932 are separated by 80 nucleotides
Ga0059261_0929: Ga0059261_0929 - anthranilate phosphoribosyltransferase, at 960,921 to 961,916
_0929
Ga0059261_0930: Ga0059261_0930 - indole-3-glycerol phosphate synthase (EC 4.1.1.48), at 961,913 to 962,695
_0930
Ga0059261_0931: Ga0059261_0931 - molybdenum cofactor biosynthesis protein MoaC, at 962,692 to 963,168
_0931
Ga0059261_0932: Ga0059261_0932 - PilZ domain, at 963,249 to 964,196
_0932
Position (kb) 962
963
964 Strain fitness (log2 ratio) -1
0
1
2 at 961.918 kb on + strand at 961.918 kb on + strand at 961.918 kb on + strand at 961.919 kb on - strand at 962.153 kb on + strand, within Ga0059261_0930 at 962.153 kb on + strand, within Ga0059261_0930 at 962.153 kb on + strand, within Ga0059261_0930 at 962.154 kb on - strand, within Ga0059261_0930 at 962.222 kb on + strand, within Ga0059261_0930 at 962.223 kb on - strand, within Ga0059261_0930 at 962.223 kb on - strand, within Ga0059261_0930 at 962.223 kb on - strand, within Ga0059261_0930 at 962.223 kb on - strand at 962.522 kb on + strand, within Ga0059261_0930 at 962.522 kb on + strand, within Ga0059261_0930 at 962.523 kb on - strand, within Ga0059261_0930 at 962.523 kb on - strand, within Ga0059261_0930 at 962.523 kb on - strand, within Ga0059261_0930 at 962.523 kb on - strand, within Ga0059261_0930 at 962.523 kb on - strand, within Ga0059261_0930 at 962.554 kb on + strand, within Ga0059261_0930 at 962.554 kb on + strand, within Ga0059261_0930 at 962.554 kb on + strand, within Ga0059261_0930 at 962.554 kb on + strand, within Ga0059261_0930 at 962.554 kb on + strand, within Ga0059261_0930 at 962.554 kb on + strand, within Ga0059261_0930 at 962.554 kb on + strand, within Ga0059261_0930 at 962.555 kb on - strand, within Ga0059261_0930 at 963.065 kb on - strand, within Ga0059261_0931 at 963.087 kb on + strand, within Ga0059261_0931 at 963.088 kb on - strand, within Ga0059261_0931 at 963.108 kb on + strand, within Ga0059261_0931 at 963.166 kb on + strand at 963.166 kb on + strand at 963.167 kb on - strand at 963.167 kb on - strand at 963.295 kb on + strand at 963.295 kb on + strand at 963.296 kb on - strand at 963.541 kb on + strand, within Ga0059261_0932 at 963.541 kb on + strand, within Ga0059261_0932 at 963.541 kb on + strand, within Ga0059261_0932 at 963.541 kb on + strand, within Ga0059261_0932 at 963.894 kb on + strand, within Ga0059261_0932 at 963.894 kb on + strand, within Ga0059261_0932 at 963.894 kb on + strand, within Ga0059261_0932 at 963.894 kb on + strand, within Ga0059261_0932 at 963.894 kb on + strand, within Ga0059261_0932 at 963.894 kb on + strand, within Ga0059261_0932 at 963.894 kb on + strand, within Ga0059261_0932 at 963.894 kb on + strand, within Ga0059261_0932 at 963.895 kb on - strand, within Ga0059261_0932 at 963.895 kb on - strand, within Ga0059261_0932 at 963.895 kb on - strand, within Ga0059261_0932
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.001 mg/ml remove 961,918 + -0.4 961,918 + +0.3 961,918 + +0.6 961,919 - +0.4 962,153 + Ga0059261_0930 0.31 +0.2 962,153 + Ga0059261_0930 0.31 +0.1 962,153 + Ga0059261_0930 0.31 -1.4 962,154 - Ga0059261_0930 0.31 +0.2 962,222 + Ga0059261_0930 0.39 -0.8 962,223 - Ga0059261_0930 0.40 -0.3 962,223 - Ga0059261_0930 0.40 -1.0 962,223 - Ga0059261_0930 0.40 +1.7 962,223 - +1.0 962,522 + Ga0059261_0930 0.78 +0.4 962,522 + Ga0059261_0930 0.78 +0.6 962,523 - Ga0059261_0930 0.78 -0.9 962,523 - Ga0059261_0930 0.78 -0.2 962,523 - Ga0059261_0930 0.78 +1.0 962,523 - Ga0059261_0930 0.78 +0.6 962,523 - Ga0059261_0930 0.78 -0.2 962,554 + Ga0059261_0930 0.82 +0.2 962,554 + Ga0059261_0930 0.82 -0.1 962,554 + Ga0059261_0930 0.82 +0.1 962,554 + Ga0059261_0930 0.82 +2.0 962,554 + Ga0059261_0930 0.82 -0.8 962,554 + Ga0059261_0930 0.82 -0.8 962,554 + Ga0059261_0930 0.82 +0.5 962,555 - Ga0059261_0930 0.82 -1.4 963,065 - Ga0059261_0931 0.78 +0.4 963,087 + Ga0059261_0931 0.83 -0.2 963,088 - Ga0059261_0931 0.83 -1.3 963,108 + Ga0059261_0931 0.87 -0.5 963,166 + -0.4 963,166 + +0.8 963,167 - -0.5 963,167 - +2.0 963,295 + +0.2 963,295 + +0.4 963,296 - +0.5 963,541 + Ga0059261_0932 0.31 +0.4 963,541 + Ga0059261_0932 0.31 -0.1 963,541 + Ga0059261_0932 0.31 +1.7 963,541 + Ga0059261_0932 0.31 -0.2 963,894 + Ga0059261_0932 0.68 +0.6 963,894 + Ga0059261_0932 0.68 -0.6 963,894 + Ga0059261_0932 0.68 -0.8 963,894 + Ga0059261_0932 0.68 +0.4 963,894 + Ga0059261_0932 0.68 +0.4 963,894 + Ga0059261_0932 0.68 +1.1 963,894 + Ga0059261_0932 0.68 +0.1 963,894 + Ga0059261_0932 0.68 -0.0 963,895 - Ga0059261_0932 0.68 +0.1 963,895 - Ga0059261_0932 0.68 -0.3 963,895 - Ga0059261_0932 0.68 -1.5
Or see this region's nucleotide sequence