Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0825 and Ga0059261_0826 are separated by 152 nucleotides Ga0059261_0826 and Ga0059261_0827 are separated by 217 nucleotides Ga0059261_0827 and Ga0059261_0828 are separated by 60 nucleotides
Ga0059261_0825: Ga0059261_0825 - Uncharacterized conserved protein, at 865,829 to 866,155
_0825
Ga0059261_0826: Ga0059261_0826 - Uncharacterized protein conserved in bacteria, at 866,308 to 866,547
_0826
Ga0059261_0827: Ga0059261_0827 - hypothetical protein, at 866,765 to 867,160
_0827
Ga0059261_0828: Ga0059261_0828 - Peptidase family S41, at 867,221 to 868,315
_0828
Position (kb) 866
867
868 Strain fitness (log2 ratio) -1
0
1
2 at 865.788 kb on + strand at 865.803 kb on + strand at 865.803 kb on + strand at 865.804 kb on - strand at 865.822 kb on + strand at 865.822 kb on + strand at 865.823 kb on - strand at 865.823 kb on - strand at 865.823 kb on - strand at 865.905 kb on + strand, within Ga0059261_0825 at 866.007 kb on + strand, within Ga0059261_0825 at 866.007 kb on + strand, within Ga0059261_0825 at 866.007 kb on + strand, within Ga0059261_0825 at 866.007 kb on + strand, within Ga0059261_0825 at 866.007 kb on + strand, within Ga0059261_0825 at 866.008 kb on - strand, within Ga0059261_0825 at 866.008 kb on - strand, within Ga0059261_0825 at 866.106 kb on + strand, within Ga0059261_0825 at 866.157 kb on + strand at 866.226 kb on + strand at 866.226 kb on + strand at 866.227 kb on - strand at 866.227 kb on - strand at 866.309 kb on + strand at 866.309 kb on + strand at 866.309 kb on + strand at 866.309 kb on + strand at 866.309 kb on + strand at 866.309 kb on + strand at 866.309 kb on + strand at 866.309 kb on + strand at 866.310 kb on - strand at 866.310 kb on - strand at 866.310 kb on - strand at 866.310 kb on - strand at 866.310 kb on - strand at 866.310 kb on - strand at 866.563 kb on - strand at 866.563 kb on - strand at 866.642 kb on + strand at 866.668 kb on + strand at 866.681 kb on + strand at 866.682 kb on - strand at 866.682 kb on - strand at 866.693 kb on - strand at 866.693 kb on - strand at 866.693 kb on - strand at 866.693 kb on - strand at 866.872 kb on + strand, within Ga0059261_0827 at 866.873 kb on - strand, within Ga0059261_0827 at 867.060 kb on - strand, within Ga0059261_0827 at 867.152 kb on + strand at 867.152 kb on + strand at 867.152 kb on + strand at 867.152 kb on + strand at 867.153 kb on - strand at 867.195 kb on - strand at 867.256 kb on + strand at 867.256 kb on + strand at 867.256 kb on + strand at 867.256 kb on + strand at 867.256 kb on + strand at 867.256 kb on + strand at 867.257 kb on - strand at 867.257 kb on - strand at 867.257 kb on - strand at 867.258 kb on + strand at 867.258 kb on + strand at 867.258 kb on + strand at 867.258 kb on + strand at 867.258 kb on + strand at 867.258 kb on + strand at 867.258 kb on + strand at 867.258 kb on + strand at 867.258 kb on + strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.393 kb on + strand, within Ga0059261_0828 at 867.393 kb on + strand, within Ga0059261_0828 at 867.393 kb on + strand, within Ga0059261_0828 at 867.394 kb on - strand, within Ga0059261_0828 at 867.394 kb on - strand, within Ga0059261_0828 at 867.394 kb on - strand, within Ga0059261_0828 at 867.394 kb on - strand, within Ga0059261_0828 at 867.394 kb on - strand at 867.424 kb on - strand, within Ga0059261_0828 at 867.561 kb on + strand, within Ga0059261_0828 at 867.561 kb on + strand at 867.562 kb on - strand, within Ga0059261_0828 at 867.562 kb on - strand, within Ga0059261_0828 at 867.562 kb on - strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.564 kb on + strand, within Ga0059261_0828 at 867.565 kb on - strand, within Ga0059261_0828 at 867.565 kb on - strand, within Ga0059261_0828 at 867.873 kb on + strand, within Ga0059261_0828 at 867.873 kb on + strand, within Ga0059261_0828 at 867.873 kb on + strand, within Ga0059261_0828 at 867.874 kb on - strand, within Ga0059261_0828 at 867.950 kb on + strand, within Ga0059261_0828 at 867.951 kb on - strand, within Ga0059261_0828 at 868.093 kb on - strand, within Ga0059261_0828 at 868.093 kb on - strand, within Ga0059261_0828 at 868.132 kb on - strand, within Ga0059261_0828 at 868.132 kb on - strand, within Ga0059261_0828 at 868.132 kb on - strand, within Ga0059261_0828
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.001 mg/ml remove 865,788 + +2.0 865,803 + +1.0 865,803 + -0.7 865,804 - -0.4 865,822 + +0.2 865,822 + +0.1 865,823 - -0.3 865,823 - -1.0 865,823 - +0.5 865,905 + Ga0059261_0825 0.23 -0.0 866,007 + Ga0059261_0825 0.54 +0.5 866,007 + Ga0059261_0825 0.54 +0.6 866,007 + Ga0059261_0825 0.54 +1.0 866,007 + Ga0059261_0825 0.54 +0.2 866,007 + Ga0059261_0825 0.54 -0.1 866,008 - Ga0059261_0825 0.55 -1.6 866,008 - Ga0059261_0825 0.55 -0.8 866,106 + Ga0059261_0825 0.85 -0.3 866,157 + +0.1 866,226 + -0.0 866,226 + +2.0 866,227 - -1.4 866,227 - -0.4 866,309 + +0.6 866,309 + -0.5 866,309 + -0.9 866,309 + +0.2 866,309 + +0.4 866,309 + +0.1 866,309 + +0.1 866,309 + +0.3 866,310 - -0.1 866,310 - +0.2 866,310 - -1.6 866,310 - -0.5 866,310 - -1.0 866,310 - +0.2 866,563 - +0.2 866,563 - +0.4 866,642 + +0.4 866,668 + +0.8 866,681 + +0.1 866,682 - -0.4 866,682 - -0.6 866,693 - -0.9 866,693 - -0.9 866,693 - +1.0 866,693 - +0.3 866,872 + Ga0059261_0827 0.27 +0.5 866,873 - Ga0059261_0827 0.27 -0.7 867,060 - Ga0059261_0827 0.74 -1.4 867,152 + +0.7 867,152 + -0.2 867,152 + +0.2 867,152 + +0.1 867,153 - -0.2 867,195 - +0.2 867,256 + +0.7 867,256 + -0.5 867,256 + -0.0 867,256 + -0.1 867,256 + -0.5 867,256 + -0.2 867,257 - +1.7 867,257 - -0.0 867,257 - +0.5 867,258 + +1.3 867,258 + -1.0 867,258 + -0.5 867,258 + +0.6 867,258 + -0.8 867,258 + +0.2 867,258 + +0.1 867,258 + +1.0 867,258 + +0.1 867,259 - -0.4 867,259 - -0.3 867,259 - +0.4 867,259 - -1.0 867,259 - -0.3 867,259 - +0.2 867,259 - -0.5 867,259 - -0.7 867,259 - -0.1 867,259 - -0.3 867,259 - +0.3 867,259 - -1.2 867,259 - -0.9 867,259 - +0.5 867,393 + Ga0059261_0828 0.16 +1.2 867,393 + Ga0059261_0828 0.16 -0.5 867,393 + Ga0059261_0828 0.16 -0.4 867,394 - Ga0059261_0828 0.16 +1.0 867,394 - Ga0059261_0828 0.16 -0.3 867,394 - Ga0059261_0828 0.16 -1.5 867,394 - Ga0059261_0828 0.16 -0.3 867,394 - +2.0 867,424 - Ga0059261_0828 0.19 +0.7 867,561 + Ga0059261_0828 0.31 +1.0 867,561 + -0.0 867,562 - Ga0059261_0828 0.31 -0.1 867,562 - Ga0059261_0828 0.31 -0.4 867,562 - Ga0059261_0828 0.31 +0.1 867,564 + Ga0059261_0828 0.31 +0.3 867,564 + Ga0059261_0828 0.31 -0.6 867,564 + Ga0059261_0828 0.31 +0.1 867,564 + Ga0059261_0828 0.31 -0.0 867,564 + Ga0059261_0828 0.31 +0.5 867,564 + Ga0059261_0828 0.31 +0.5 867,564 + Ga0059261_0828 0.31 -0.9 867,564 + Ga0059261_0828 0.31 -0.4 867,564 + Ga0059261_0828 0.31 +0.2 867,564 + Ga0059261_0828 0.31 +0.5 867,564 + Ga0059261_0828 0.31 -0.2 867,565 - Ga0059261_0828 0.31 -0.4 867,565 - Ga0059261_0828 0.31 -0.7 867,873 + Ga0059261_0828 0.60 +0.1 867,873 + Ga0059261_0828 0.60 -0.5 867,873 + Ga0059261_0828 0.60 -0.8 867,874 - Ga0059261_0828 0.60 -1.0 867,950 + Ga0059261_0828 0.67 -0.4 867,951 - Ga0059261_0828 0.67 +0.7 868,093 - Ga0059261_0828 0.80 +1.0 868,093 - Ga0059261_0828 0.80 +0.9 868,132 - Ga0059261_0828 0.83 -0.2 868,132 - Ga0059261_0828 0.83 +0.4 868,132 - Ga0059261_0828 0.83 +0.5
Or see this region's nucleotide sequence