Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0643 and Ga0059261_0644 are separated by 159 nucleotides Ga0059261_0644 and Ga0059261_0645 are separated by 43 nucleotides Ga0059261_0645 and Ga0059261_0646 are separated by 103 nucleotides
Ga0059261_0643: Ga0059261_0643 - Uncharacterized protein conserved in bacteria, at 683,701 to 685,092
_0643
Ga0059261_0644: Ga0059261_0644 - peptide deformylase, at 685,252 to 685,779
_0644
Ga0059261_0645: Ga0059261_0645 - DNA replication and repair protein RecR, at 685,823 to 686,419
_0645
Ga0059261_0646: Ga0059261_0646 - methionyl-tRNA formyltransferase, at 686,523 to 687,446
_0646
Position (kb) 685
686
687 Strain fitness (log2 ratio) -2
-1
0
1
2 at 685.113 kb on + strand at 685.113 kb on + strand at 685.113 kb on + strand at 685.114 kb on - strand at 685.114 kb on - strand at 685.114 kb on - strand at 685.122 kb on + strand at 685.185 kb on + strand at 685.185 kb on + strand at 685.186 kb on - strand at 685.186 kb on - strand at 685.203 kb on + strand at 685.203 kb on + strand at 685.204 kb on - strand at 685.204 kb on - strand at 685.214 kb on + strand at 685.215 kb on - strand at 685.847 kb on + strand at 685.878 kb on + strand at 685.879 kb on - strand at 685.879 kb on - strand at 685.879 kb on - strand at 685.959 kb on + strand, within Ga0059261_0645 at 685.959 kb on + strand, within Ga0059261_0645 at 685.959 kb on + strand, within Ga0059261_0645 at 685.959 kb on + strand, within Ga0059261_0645 at 685.960 kb on - strand, within Ga0059261_0645 at 685.960 kb on - strand, within Ga0059261_0645 at 685.960 kb on - strand at 685.960 kb on - strand, within Ga0059261_0645 at 685.960 kb on - strand, within Ga0059261_0645 at 685.960 kb on - strand, within Ga0059261_0645 at 685.960 kb on - strand, within Ga0059261_0645 at 685.960 kb on - strand, within Ga0059261_0645 at 686.230 kb on + strand, within Ga0059261_0645 at 686.231 kb on - strand, within Ga0059261_0645 at 686.231 kb on - strand, within Ga0059261_0645 at 686.430 kb on + strand at 686.430 kb on + strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.431 kb on - strand at 686.528 kb on + strand at 686.528 kb on + strand at 686.528 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.001 mg/ml remove 685,113 + +0.7 685,113 + -0.7 685,113 + +0.0 685,114 - +0.0 685,114 - -0.7 685,114 - -0.4 685,122 + +0.9 685,185 + +0.5 685,185 + -0.8 685,186 - +0.3 685,186 - +0.2 685,203 + -2.3 685,203 + +0.3 685,204 - +0.9 685,204 - -0.1 685,214 + -0.4 685,215 - +0.3 685,847 + +2.5 685,878 + -0.5 685,879 - -1.3 685,879 - -0.0 685,879 - -1.0 685,959 + Ga0059261_0645 0.23 -1.5 685,959 + Ga0059261_0645 0.23 -1.6 685,959 + Ga0059261_0645 0.23 +0.5 685,959 + Ga0059261_0645 0.23 -0.6 685,960 - Ga0059261_0645 0.23 -0.9 685,960 - Ga0059261_0645 0.23 +0.2 685,960 - -0.7 685,960 - Ga0059261_0645 0.23 +1.1 685,960 - Ga0059261_0645 0.23 -0.2 685,960 - Ga0059261_0645 0.23 +0.9 685,960 - Ga0059261_0645 0.23 -2.4 685,960 - Ga0059261_0645 0.23 +0.1 686,230 + Ga0059261_0645 0.68 -0.3 686,231 - Ga0059261_0645 0.68 -0.6 686,231 - Ga0059261_0645 0.68 -1.1 686,430 + -1.8 686,430 + -0.6 686,431 - -0.1 686,431 - +0.3 686,431 - -0.6 686,431 - +0.9 686,431 - -0.1 686,431 - -0.7 686,431 - -0.4 686,431 - -0.1 686,431 - +0.3 686,431 - -0.0 686,431 - -0.1 686,431 - +1.2 686,528 + -0.8 686,528 + +0.6 686,528 + -0.3
Or see this region's nucleotide sequence