Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0253 and Ga0059261_0254 are separated by 40 nucleotides Ga0059261_0254 and Ga0059261_0255 are separated by 121 nucleotides Ga0059261_0255 and Ga0059261_0256 are separated by 5 nucleotides
Ga0059261_0253: Ga0059261_0253 - hypothetical protein, at 243,021 to 243,452
_0253
Ga0059261_0254: Ga0059261_0254 - triosephosphate isomerase (EC 5.3.1.1), at 243,493 to 244,239
_0254
Ga0059261_0255: Ga0059261_0255 - SurA N-terminal domain/PPIC-type PPIASE domain, at 244,361 to 246,334
_0255
Ga0059261_0256: Ga0059261_0256 - anthranilate synthase component I, non-proteobacterial lineages, at 246,340 to 247,866
_0256
Position (kb) 244
245
246
247 Strain fitness (log2 ratio) -2
-1
0
1
2 at 244.261 kb on + strand at 244.262 kb on - strand at 244.277 kb on + strand at 244.327 kb on + strand at 244.328 kb on - strand at 244.676 kb on + strand, within Ga0059261_0255 at 244.794 kb on + strand, within Ga0059261_0255 at 244.795 kb on - strand, within Ga0059261_0255 at 244.795 kb on - strand at 244.904 kb on + strand, within Ga0059261_0255 at 244.904 kb on + strand, within Ga0059261_0255 at 244.905 kb on - strand, within Ga0059261_0255 at 244.973 kb on + strand at 245.036 kb on + strand, within Ga0059261_0255 at 245.057 kb on + strand at 245.157 kb on - strand, within Ga0059261_0255 at 245.158 kb on + strand at 245.159 kb on - strand, within Ga0059261_0255 at 245.231 kb on - strand, within Ga0059261_0255 at 246.365 kb on + strand at 246.365 kb on + strand at 246.365 kb on + strand at 246.365 kb on + strand at 246.365 kb on + strand at 246.365 kb on + strand at 246.366 kb on - strand at 246.366 kb on - strand at 246.366 kb on - strand at 246.669 kb on + strand at 246.670 kb on - strand, within Ga0059261_0256 at 246.670 kb on - strand, within Ga0059261_0256 at 246.670 kb on - strand, within Ga0059261_0256 at 246.677 kb on + strand, within Ga0059261_0256 at 246.739 kb on + strand, within Ga0059261_0256 at 247.045 kb on + strand, within Ga0059261_0256 at 247.045 kb on + strand, within Ga0059261_0256 at 247.045 kb on + strand, within Ga0059261_0256 at 247.045 kb on + strand, within Ga0059261_0256 at 247.046 kb on - strand, within Ga0059261_0256 at 247.046 kb on - strand, within Ga0059261_0256 at 247.058 kb on + strand, within Ga0059261_0256 at 247.075 kb on + strand, within Ga0059261_0256 at 247.075 kb on + strand, within Ga0059261_0256 at 247.076 kb on - strand, within Ga0059261_0256 at 247.076 kb on - strand, within Ga0059261_0256 at 247.092 kb on + strand, within Ga0059261_0256 at 247.093 kb on - strand, within Ga0059261_0256 at 247.093 kb on - strand, within Ga0059261_0256 at 247.093 kb on - strand, within Ga0059261_0256 at 247.093 kb on - strand, within Ga0059261_0256 at 247.093 kb on - strand, within Ga0059261_0256 at 247.156 kb on + strand, within Ga0059261_0256 at 247.195 kb on + strand at 247.195 kb on + strand, within Ga0059261_0256 at 247.196 kb on - strand, within Ga0059261_0256 at 247.196 kb on - strand, within Ga0059261_0256
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.001 mg/ml remove 244,261 + -0.2 244,262 - -1.4 244,277 + +0.1 244,327 + -0.0 244,328 - +0.3 244,676 + Ga0059261_0255 0.16 -0.7 244,794 + Ga0059261_0255 0.22 +1.9 244,795 - Ga0059261_0255 0.22 -1.9 244,795 - +0.3 244,904 + Ga0059261_0255 0.28 -1.2 244,904 + Ga0059261_0255 0.28 -0.4 244,905 - Ga0059261_0255 0.28 -0.7 244,973 + -1.4 245,036 + Ga0059261_0255 0.34 -1.4 245,057 + -0.1 245,157 - Ga0059261_0255 0.40 +0.3 245,158 + +1.9 245,159 - Ga0059261_0255 0.40 -0.8 245,231 - Ga0059261_0255 0.44 -2.1 246,365 + +0.5 246,365 + +0.3 246,365 + +0.2 246,365 + -0.1 246,365 + +0.9 246,365 + +0.1 246,366 - -0.1 246,366 - -0.5 246,366 - +0.3 246,669 + +0.9 246,670 - Ga0059261_0256 0.22 +0.1 246,670 - Ga0059261_0256 0.22 -0.1 246,670 - Ga0059261_0256 0.22 -0.3 246,677 + Ga0059261_0256 0.22 +1.2 246,739 + Ga0059261_0256 0.26 -0.1 247,045 + Ga0059261_0256 0.46 +0.7 247,045 + Ga0059261_0256 0.46 +0.8 247,045 + Ga0059261_0256 0.46 -0.3 247,045 + Ga0059261_0256 0.46 +0.0 247,046 - Ga0059261_0256 0.46 -0.1 247,046 - Ga0059261_0256 0.46 -0.4 247,058 + Ga0059261_0256 0.47 -0.2 247,075 + Ga0059261_0256 0.48 +0.4 247,075 + Ga0059261_0256 0.48 +1.9 247,076 - Ga0059261_0256 0.48 -2.3 247,076 - Ga0059261_0256 0.48 +0.1 247,092 + Ga0059261_0256 0.49 -0.0 247,093 - Ga0059261_0256 0.49 +0.7 247,093 - Ga0059261_0256 0.49 +0.6 247,093 - Ga0059261_0256 0.49 -0.7 247,093 - Ga0059261_0256 0.49 -0.1 247,093 - Ga0059261_0256 0.49 -0.9 247,156 + Ga0059261_0256 0.53 +0.2 247,195 + -1.1 247,195 + Ga0059261_0256 0.56 -0.3 247,196 - Ga0059261_0256 0.56 +0.1 247,196 - Ga0059261_0256 0.56 -0.9
Or see this region's nucleotide sequence