Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3693

Experiment: Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0005 mg/ml
3,804,633	+				+0.2
3,804,633	+				+0.2
3,804,698	+				-0.1
3,804,698	+				-0.1
3,804,699	-				-1.1
3,804,742	+				-1.1
3,804,901	+		Ga0059261_3692	0.23	+0.2
3,804,901	+		Ga0059261_3692	0.23	+0.0
3,804,901	+		Ga0059261_3692	0.23	+0.8
3,804,901	+		Ga0059261_3692	0.23	+0.6
3,804,901	+		Ga0059261_3692	0.23	-0.7
3,804,902	-		Ga0059261_3692	0.23	-0.5
3,804,902	-		Ga0059261_3692	0.23	+0.2
3,804,902	-		Ga0059261_3692	0.23	+0.2
3,804,988	+		Ga0059261_3692	0.34	-0.6
3,804,988	+		Ga0059261_3692	0.34	+0.7
3,804,988	+		Ga0059261_3692	0.34	+0.1
3,804,989	-		Ga0059261_3692	0.34	-0.1
3,804,989	-		Ga0059261_3692	0.34	+0.2
3,804,989	-		Ga0059261_3692	0.34	-1.8
3,804,989	-		Ga0059261_3692	0.34	-0.7
3,805,165	-		Ga0059261_3692	0.56	-0.0
3,805,206	+		Ga0059261_3692	0.61	-0.8
3,805,206	+		Ga0059261_3692	0.61	+0.0
3,805,206	+		Ga0059261_3692	0.61	-1.4
3,805,206	+		Ga0059261_3692	0.61	-0.5
3,805,206	+		Ga0059261_3692	0.61	+0.4
3,805,206	+		Ga0059261_3692	0.61	+0.2
3,805,227	+		Ga0059261_3692	0.64	-0.2
3,805,227	+		Ga0059261_3692	0.64	-1.3
3,805,227	+		Ga0059261_3692	0.64	-0.0
3,805,227	+		Ga0059261_3692	0.64	-0.5
3,805,228	-		Ga0059261_3692	0.64	+1.0
3,805,228	-		Ga0059261_3692	0.64	+0.4
3,805,270	+		Ga0059261_3692	0.69	-0.1
3,805,271	-		Ga0059261_3692	0.69	-1.1
3,805,271	-		Ga0059261_3692	0.69	-0.5
3,805,271	-		Ga0059261_3692	0.69	+0.2
3,805,271	-		Ga0059261_3692	0.69	+0.5
3,805,396	+		Ga0059261_3692	0.84	-0.6
3,805,396	+		Ga0059261_3692	0.84	-0.4
3,805,396	+		Ga0059261_3692	0.84	-0.6
3,805,396	+		Ga0059261_3692	0.84	-0.3
3,805,396	+		Ga0059261_3692	0.84	+0.3
3,805,397	-		Ga0059261_3692	0.85	+0.6
3,805,397	-		Ga0059261_3692	0.85	-0.3
3,805,397	-		Ga0059261_3692	0.85	-0.7
3,805,397	-		Ga0059261_3692	0.85	+0.7
3,805,397	-		Ga0059261_3692	0.85	+0.2
3,805,397	-		Ga0059261_3692	0.85	-0.1
3,805,412	+		Ga0059261_3692	0.86	+0.5
3,805,413	-		Ga0059261_3692	0.87	+0.1
3,805,413	-		Ga0059261_3692	0.87	+0.4
3,805,519	+				-0.8
3,805,622	+		Ga0059261_3693	0.13	+0.7
3,805,634	+		Ga0059261_3693	0.14	+0.1
3,805,634	+		Ga0059261_3693	0.14	+0.7
3,805,634	+		Ga0059261_3693	0.14	+1.2
3,805,635	-		Ga0059261_3693	0.14	+0.5
3,805,635	-		Ga0059261_3693	0.14	-0.2
3,805,635	-		Ga0059261_3693	0.14	+0.2
3,805,673	+		Ga0059261_3693	0.19	+0.9
3,805,673	+		Ga0059261_3693	0.19	+0.4
3,805,674	-		Ga0059261_3693	0.19	-0.5
3,805,679	+		Ga0059261_3693	0.20	-0.1
3,805,679	+		Ga0059261_3693	0.20	+0.7
3,805,679	+		Ga0059261_3693	0.20	+0.5
3,805,679	+		Ga0059261_3693	0.20	+0.5
3,805,679	+		Ga0059261_3693	0.20	+0.7
3,805,679	+		Ga0059261_3693	0.20	-0.1
3,805,680	-				-0.6
3,805,680	-		Ga0059261_3693	0.20	+0.2
3,805,680	-		Ga0059261_3693	0.20	+0.3
3,805,775	+		Ga0059261_3693	0.32	+0.5
3,805,775	+		Ga0059261_3693	0.32	+0.2
3,805,775	+		Ga0059261_3693	0.32	+0.5
3,805,775	+		Ga0059261_3693	0.32	+0.9
3,805,776	-		Ga0059261_3693	0.32	+0.0
3,805,776	-		Ga0059261_3693	0.32	+0.3
3,805,776	-		Ga0059261_3693	0.32	+0.5
3,805,868	+		Ga0059261_3693	0.44	+0.3
3,805,868	+		Ga0059261_3693	0.44	+0.5
3,805,868	+		Ga0059261_3693	0.44	-0.6
3,805,868	+				-0.3
3,805,868	+		Ga0059261_3693	0.44	+1.0
3,805,868	+		Ga0059261_3693	0.44	+0.7
3,805,868	+		Ga0059261_3693	0.44	+1.1
3,805,868	+		Ga0059261_3693	0.44	+1.0
3,805,869	-		Ga0059261_3693	0.44	+1.1
3,805,869	-		Ga0059261_3693	0.44	+0.6
3,805,869	-		Ga0059261_3693	0.44	-0.4
3,805,869	-				+2.7
3,805,869	-		Ga0059261_3693	0.44	+0.3
3,805,869	-		Ga0059261_3693	0.44	-0.6
3,805,869	-		Ga0059261_3693	0.44	-0.4
3,805,869	-		Ga0059261_3693	0.44	-1.1
3,805,869	-		Ga0059261_3693	0.44	+0.7
3,805,869	-		Ga0059261_3693	0.44	+1.2
3,805,869	-		Ga0059261_3693	0.44	+0.3
3,805,869	-		Ga0059261_3693	0.44	+0.1
3,805,869	-		Ga0059261_3693	0.44	+0.4
3,805,869	-				+0.4
3,805,869	-		Ga0059261_3693	0.44	+0.6
3,805,958	+		Ga0059261_3693	0.56	+0.2
3,805,959	-		Ga0059261_3693	0.56	+0.6
3,806,240	+				+1.0
3,806,241	-				+1.1
3,806,263	+				+0.6
3,806,263	+				-0.5
3,806,301	+				+1.3
3,806,302	-				+0.1
3,806,302	-				-0.0
3,806,302	-				+0.4
3,806,349	-				+0.6
3,806,349	-				-0.1
3,806,408	-				-0.2
3,806,461	+				-0.3
3,806,461	+				+1.0
3,806,461	+				+0.0
3,806,461	+				+0.3
3,806,461	+				+0.8
3,806,551	+				-0.1
3,806,552	-				-0.1
3,806,554	+				-1.2
3,806,554	+				-0.1
3,806,555	-				+1.1
3,806,555	-				+0.6
3,806,720	+				+0.6
3,806,720	+				-0.6
3,806,721	-				-0.0
3,806,747	+				-1.2
3,806,747	+				+0.3
3,806,747	+				-0.1
3,806,748	-				+0.0
3,806,748	-				+0.7
3,806,748	-				+0.0
3,806,748	-				-1.3
3,806,748	-				+0.0
3,806,748	-				+0.4
3,806,748	-				-0.3
3,806,915	+		Ga0059261_3694	0.16	+0.1
3,806,915	+		Ga0059261_3694	0.16	-0.6
3,806,915	+		Ga0059261_3694	0.16	+0.5
3,806,915	+		Ga0059261_3694	0.16	+0.6
3,806,915	+		Ga0059261_3694	0.16	-0.0
3,806,915	+		Ga0059261_3694	0.16	+0.2
3,806,916	-		Ga0059261_3694	0.16	-0.0
3,806,916	-		Ga0059261_3694	0.16	+0.8
3,806,916	-		Ga0059261_3694	0.16	-0.1
3,807,125	+		Ga0059261_3694	0.32	+0.6
3,807,244	-		Ga0059261_3694	0.42	+0.1
3,807,244	-		Ga0059261_3694	0.42	+0.7