Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3050

Experiment: Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0005 mg/ml
3,187,296	+				+1.3
3,187,296	+				-1.0
3,187,297	-				+0.4
3,187,297	-				+0.1
3,187,451	+		Ga0059261_3049	0.14	+0.3
3,187,451	+		Ga0059261_3049	0.14	+1.3
3,187,451	+		Ga0059261_3049	0.14	+0.1
3,187,451	+		Ga0059261_3049	0.14	+0.1
3,187,451	+		Ga0059261_3049	0.14	+0.5
3,187,452	-		Ga0059261_3049	0.15	-0.5
3,187,452	-		Ga0059261_3049	0.15	-0.4
3,187,452	-		Ga0059261_3049	0.15	-0.3
3,187,452	-		Ga0059261_3049	0.15	-0.9
3,187,452	-		Ga0059261_3049	0.15	-0.4
3,187,452	-		Ga0059261_3049	0.15	-0.3
3,187,452	-		Ga0059261_3049	0.15	+0.2
3,187,452	-		Ga0059261_3049	0.15	+1.2
3,187,452	-		Ga0059261_3049	0.15	+0.8
3,187,452	-		Ga0059261_3049	0.15	+0.8
3,187,452	-		Ga0059261_3049	0.15	-0.4
3,187,452	-		Ga0059261_3049	0.15	-0.6
3,187,482	-		Ga0059261_3049	0.18	+0.7
3,187,535	+		Ga0059261_3049	0.24	-0.4
3,187,535	+		Ga0059261_3049	0.24	-1.3
3,187,556	+		Ga0059261_3049	0.26	-0.1
3,187,557	-		Ga0059261_3049	0.27	+0.2
3,187,557	-		Ga0059261_3049	0.27	-0.1
3,187,805	+		Ga0059261_3049	0.55	-0.2
3,187,805	+		Ga0059261_3049	0.55	-0.2
3,187,806	-		Ga0059261_3049	0.55	+0.2
3,187,806	-		Ga0059261_3049	0.55	+0.1
3,187,836	+		Ga0059261_3049	0.58	+1.2
3,187,836	+		Ga0059261_3049	0.58	-0.3
3,187,836	+		Ga0059261_3049	0.58	-0.3
3,187,836	+		Ga0059261_3049	0.58	+0.4
3,187,836	+		Ga0059261_3049	0.58	-0.3
3,187,836	+		Ga0059261_3049	0.58	+0.6
3,187,836	+		Ga0059261_3049	0.58	-0.1
3,187,837	-		Ga0059261_3049	0.58	-2.1
3,187,837	-		Ga0059261_3049	0.58	-1.1
3,187,837	-		Ga0059261_3049	0.58	-0.1
3,187,837	-		Ga0059261_3049	0.58	-0.4
3,187,837	-		Ga0059261_3049	0.58	-0.1
3,187,837	-		Ga0059261_3049	0.58	+0.3
3,187,837	-		Ga0059261_3049	0.58	-0.6
3,187,837	-		Ga0059261_3049	0.58	-0.0
3,187,837	-		Ga0059261_3049	0.58	-0.4
3,187,837	-		Ga0059261_3049	0.58	-0.7
3,187,837	-		Ga0059261_3049	0.58	-0.2
3,187,855	+		Ga0059261_3049	0.60	+1.8
3,187,855	+		Ga0059261_3049	0.60	-0.1
3,187,855	+		Ga0059261_3049	0.60	+1.2
3,188,033	+		Ga0059261_3049	0.81	-0.2
3,188,033	+		Ga0059261_3049	0.81	-0.4
3,188,033	+		Ga0059261_3049	0.81	+0.8
3,188,033	+		Ga0059261_3049	0.81	+1.2
3,188,034	-		Ga0059261_3049	0.81	-0.2
3,188,034	-		Ga0059261_3049	0.81	-1.2
3,188,040	+		Ga0059261_3049	0.81	+0.5
3,188,040	+		Ga0059261_3049	0.81	-0.4
3,188,041	-		Ga0059261_3049	0.82	-0.2
3,188,041	-		Ga0059261_3049	0.82	+0.6
3,188,041	-		Ga0059261_3049	0.82	-0.2
3,188,041	-		Ga0059261_3049	0.82	+1.0
3,188,301	-		Ga0059261_3050	0.13	+1.3
3,188,429	+		Ga0059261_3050	0.33	+0.4
3,188,429	+		Ga0059261_3050	0.33	+0.8
3,188,430	-		Ga0059261_3050	0.33	-0.2
3,188,430	-		Ga0059261_3050	0.33	+1.3
3,188,430	-		Ga0059261_3050	0.33	-2.3
3,188,431	+		Ga0059261_3050	0.33	-0.9
3,188,431	+		Ga0059261_3050	0.33	+0.6
3,188,431	+		Ga0059261_3050	0.33	+0.7
3,188,432	-		Ga0059261_3050	0.34	-0.5
3,188,593	+		Ga0059261_3050	0.60	+0.2
3,188,609	+		Ga0059261_3050	0.62	-0.7
3,188,610	-		Ga0059261_3050	0.62	-0.9
3,188,610	-		Ga0059261_3050	0.62	+0.1
3,188,610	-		Ga0059261_3050	0.62	-0.3
3,188,610	-		Ga0059261_3050	0.62	-0.1
3,188,680	+		Ga0059261_3050	0.74	+0.4
3,188,680	+		Ga0059261_3050	0.74	+0.3
3,188,680	+		Ga0059261_3050	0.74	+0.8
3,188,680	+		Ga0059261_3050	0.74	-1.6
3,188,680	+		Ga0059261_3050	0.74	+1.1
3,188,680	+		Ga0059261_3050	0.74	-0.2
3,188,680	+		Ga0059261_3050	0.74	-0.3
3,188,680	+		Ga0059261_3050	0.74	+0.2
3,188,680	+		Ga0059261_3050	0.74	+0.0
3,188,680	+		Ga0059261_3050	0.74	-0.1
3,188,681	-		Ga0059261_3050	0.74	-1.1
3,188,681	-		Ga0059261_3050	0.74	+0.0
3,188,681	-		Ga0059261_3050	0.74	+0.4
3,188,681	-		Ga0059261_3050	0.74	+0.9
3,188,681	-		Ga0059261_3050	0.74	-0.2
3,188,681	-		Ga0059261_3050	0.74	+0.7
3,188,681	-		Ga0059261_3050	0.74	+0.3
3,188,716	+		Ga0059261_3050	0.79	-0.3
3,188,716	+		Ga0059261_3050	0.79	+0.6
3,188,902	-				-0.7
3,188,917	+				-0.4
3,188,917	+				-0.0
3,188,917	+				-0.5
3,188,917	+				-0.4
3,188,917	+				+0.5
3,188,917	+				-0.1
3,188,918	-				+0.5
3,188,918	-				+0.1
3,188,918	-				+0.7
3,188,918	-				+0.8
3,188,918	-				+0.2
3,188,919	+				+1.3
3,188,919	+				-0.2
3,188,919	+				-2.2
3,188,919	+				+0.8
3,188,919	+				+0.4
3,188,920	-				-0.1
3,188,920	-				-0.4
3,188,920	-				+0.1
3,188,920	-				+0.6
3,188,920	-				-0.2
3,188,920	-				-1.0
3,188,920	-				+0.1
3,188,920	-				-2.0
3,188,920	-				+0.3
3,188,920	-				+0.1
3,188,937	-				+1.2
3,188,997	+		Ga0059261_3051	0.10	-0.4
3,188,997	+		Ga0059261_3051	0.10	-1.6
3,188,997	+		Ga0059261_3051	0.10	+2.1
3,188,997	+		Ga0059261_3051	0.10	+0.8
3,188,998	-		Ga0059261_3051	0.10	-0.5
3,188,998	-		Ga0059261_3051	0.10	+0.1
3,189,004	+		Ga0059261_3051	0.11	+0.5
3,189,026	+		Ga0059261_3051	0.14	+0.3
3,189,026	+		Ga0059261_3051	0.14	+0.5
3,189,026	+		Ga0059261_3051	0.14	-1.2
3,189,027	-		Ga0059261_3051	0.14	-0.7
3,189,027	-		Ga0059261_3051	0.14	-0.7
3,189,027	-		Ga0059261_3051	0.14	-0.6
3,189,037	-		Ga0059261_3051	0.15	-2.3
3,189,037	-		Ga0059261_3051	0.15	+0.4
3,189,291	+		Ga0059261_3051	0.49	+0.4
3,189,291	+		Ga0059261_3051	0.49	-0.7
3,189,292	-		Ga0059261_3051	0.50	-0.0
3,189,469	+		Ga0059261_3051	0.73	+1.0
3,189,469	+		Ga0059261_3051	0.73	+0.2
3,189,469	+		Ga0059261_3051	0.73	-0.5
3,189,469	+		Ga0059261_3051	0.73	-1.0
3,189,469	+		Ga0059261_3051	0.73	+0.1
3,189,469	+		Ga0059261_3051	0.73	-0.3
3,189,470	-		Ga0059261_3051	0.73	-0.5
3,189,470	-		Ga0059261_3051	0.73	+0.8
3,189,470	-		Ga0059261_3051	0.73	-0.1
3,189,470	-		Ga0059261_3051	0.73	+0.8
3,189,470	-		Ga0059261_3051	0.73	-0.4
3,189,472	+		Ga0059261_3051	0.74	+0.5
3,189,472	+		Ga0059261_3051	0.74	-0.9
3,189,472	+		Ga0059261_3051	0.74	+0.2
3,189,472	+		Ga0059261_3051	0.74	-0.3
3,189,473	-		Ga0059261_3051	0.74	-0.1
3,189,473	-		Ga0059261_3051	0.74	-0.3
3,189,473	-		Ga0059261_3051	0.74	-0.2
3,189,473	-		Ga0059261_3051	0.74	-2.2
3,189,493	+		Ga0059261_3051	0.76	-0.1
3,189,494	-		Ga0059261_3051	0.77	+0.6
3,189,494	-		Ga0059261_3051	0.77	-0.3
3,189,494	-		Ga0059261_3051	0.77	-0.2
3,189,494	-		Ga0059261_3051	0.77	-1.2
3,189,559	+		Ga0059261_3051	0.85	-0.2
3,189,559	+		Ga0059261_3051	0.85	-0.6
3,189,559	+		Ga0059261_3051	0.85	+0.6
3,189,560	-		Ga0059261_3051	0.85	+0.2
3,189,574	-		Ga0059261_3051	0.87	-0.2
3,189,653	+				-0.2
3,189,801	-				+0.5