Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2837

Experiment: Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0005 mg/ml
2,946,753	+		Ga0059261_2835	0.88	+0.1
2,946,753	+		Ga0059261_2835	0.88	-1.3
2,946,753	+		Ga0059261_2835	0.88	-0.4
2,946,753	+		Ga0059261_2835	0.88	+0.4
2,946,753	+		Ga0059261_2835	0.88	-0.7
2,946,753	+		Ga0059261_2835	0.88	+0.9
2,946,753	+		Ga0059261_2835	0.88	-0.3
2,946,753	+		Ga0059261_2835	0.88	+0.4
2,946,753	+				+0.3
2,946,753	+		Ga0059261_2835	0.88	-0.6
2,946,754	-		Ga0059261_2835	0.88	-0.7
2,946,754	-		Ga0059261_2835	0.88	+0.5
2,946,754	-		Ga0059261_2835	0.88	+1.3
2,946,754	-		Ga0059261_2835	0.88	-0.2
2,946,754	-		Ga0059261_2835	0.88	-0.1
2,946,754	-		Ga0059261_2835	0.88	-0.6
2,946,754	-		Ga0059261_2835	0.88	-1.2
2,946,754	-		Ga0059261_2835	0.88	+1.0
2,946,754	-		Ga0059261_2835	0.88	-0.7
2,946,754	-		Ga0059261_2835	0.88	-0.6
2,946,776	+				-1.1
2,946,776	+				+0.4
2,946,889	-				+0.2
2,947,241	+		Ga0059261_2836	0.40	+0.2
2,947,241	+				-1.5
2,947,242	-		Ga0059261_2836	0.40	-0.3
2,947,242	-		Ga0059261_2836	0.40	-0.6
2,947,242	-		Ga0059261_2836	0.40	-0.2
2,947,347	+		Ga0059261_2836	0.52	+0.2
2,947,347	+		Ga0059261_2836	0.52	+0.1
2,947,348	-		Ga0059261_2836	0.52	+0.4
2,947,348	-		Ga0059261_2836	0.52	+0.4
2,947,588	+		Ga0059261_2836	0.79	-0.4
2,947,644	+		Ga0059261_2836	0.86	+0.1
2,947,645	-		Ga0059261_2836	0.86	+2.4
2,947,645	-		Ga0059261_2836	0.86	-0.1
2,947,743	+				+0.4
2,947,743	+				-0.3
2,947,743	+				-1.3
2,947,743	+				-0.4
2,947,743	+				+1.4
2,947,743	+				+0.0
2,947,743	+				+0.9
2,947,743	+				-0.2
2,947,743	+				+0.6
2,947,744	-				-1.4
2,947,744	-				+0.1
2,947,744	-				+0.2
2,947,744	-				+0.4
2,947,744	-				-0.6
2,947,752	+				+0.0
2,947,752	+				-0.4
2,947,752	+				-0.4
2,947,753	-				+0.0
2,947,791	-				-0.2
2,947,792	+				-0.0
2,947,792	+				+1.0
2,947,793	-				+0.4
2,947,793	-				-1.6
2,947,793	-				+0.6
2,947,793	-				-0.2
2,947,966	+		Ga0059261_2837	0.26	+0.1
2,947,966	+		Ga0059261_2837	0.26	+0.0
2,948,029	+		Ga0059261_2837	0.33	-0.0
2,948,029	+		Ga0059261_2837	0.33	-0.1
2,948,029	+		Ga0059261_2837	0.33	+0.0
2,948,029	+		Ga0059261_2837	0.33	+0.2
2,948,029	+		Ga0059261_2837	0.33	-0.1
2,948,029	+				-0.1
2,948,029	+		Ga0059261_2837	0.33	+0.5
2,948,029	+		Ga0059261_2837	0.33	+0.4
2,948,029	+		Ga0059261_2837	0.33	-2.5
2,948,030	-		Ga0059261_2837	0.33	+0.1
2,948,030	-		Ga0059261_2837	0.33	+0.5
2,948,030	-		Ga0059261_2837	0.33	+1.0
2,948,030	-		Ga0059261_2837	0.33	+0.3
2,948,030	-		Ga0059261_2837	0.33	+0.5
2,948,185	+		Ga0059261_2837	0.50	-0.5
2,948,186	-		Ga0059261_2837	0.50	-1.0
2,948,458	+		Ga0059261_2837	0.80	+0.3
2,948,459	-		Ga0059261_2837	0.80	-1.6
2,948,459	-		Ga0059261_2837	0.80	+0.6
2,948,459	-		Ga0059261_2837	0.80	+0.1
2,948,459	-		Ga0059261_2837	0.80	+0.3
2,948,499	+		Ga0059261_2837	0.85	+1.2
2,948,569	+				+0.9
2,948,569	+				+0.9
2,948,569	+				+0.2
2,948,569	+				-1.1
2,948,569	+				+0.2
2,948,569	+				-0.2
2,948,569	+				-0.6
2,948,570	-				+2.1
2,948,570	-				+0.9
2,948,570	-				-0.3
2,948,570	-				+0.4
2,948,570	-				+0.5
2,948,570	-				-0.1
2,948,570	-				+0.5
2,948,570	-				+0.3
2,948,570	-				-0.4
2,948,583	+				+1.0
2,948,607	+				+0.9
2,948,607	+				-0.0
2,948,607	+				-0.1
2,948,607	+				-0.7
2,948,608	-				+1.0
2,948,608	-				+0.4
2,948,667	-				+0.8
2,948,723	+		Ga0059261_2838	0.16	-0.2
2,948,723	+		Ga0059261_2838	0.16	+0.5
2,948,723	+		Ga0059261_2838	0.16	+0.0
2,948,723	+		Ga0059261_2838	0.16	-0.3
2,948,723	+		Ga0059261_2838	0.16	+0.0
2,948,723	+				+0.1
2,948,724	-		Ga0059261_2838	0.16	-0.1
2,948,724	-		Ga0059261_2838	0.16	-0.1
2,948,724	-		Ga0059261_2838	0.16	-0.1
2,948,724	-		Ga0059261_2838	0.16	-0.9
2,948,724	-				-0.5
2,948,724	-		Ga0059261_2838	0.16	-0.4
2,948,724	-		Ga0059261_2838	0.16	+0.4
2,948,792	+				-1.1
2,948,792	+		Ga0059261_2838	0.29	+0.1
2,948,793	-		Ga0059261_2838	0.29	+0.2
2,948,793	-		Ga0059261_2838	0.29	-0.1
2,948,793	-		Ga0059261_2838	0.29	-0.7
2,948,793	-		Ga0059261_2838	0.29	+0.1
2,948,793	-		Ga0059261_2838	0.29	-0.1
2,948,832	+		Ga0059261_2838	0.36	-0.1
2,948,957	+		Ga0059261_2838	0.60	-0.4
2,948,957	+		Ga0059261_2838	0.60	-0.2
2,948,957	+		Ga0059261_2838	0.60	+0.1
2,948,957	+		Ga0059261_2838	0.60	+1.0
2,948,957	+				+0.3
2,948,957	+		Ga0059261_2838	0.60	+0.5
2,948,957	+		Ga0059261_2838	0.60	+0.1
2,948,958	-		Ga0059261_2838	0.60	+0.4
2,949,004	+		Ga0059261_2838	0.69	+0.4
2,949,005	-		Ga0059261_2838	0.69	-1.4
2,949,005	-		Ga0059261_2838	0.69	-0.1
2,949,035	+		Ga0059261_2838	0.75	+0.2
2,949,035	+		Ga0059261_2838	0.75	+0.1
2,949,035	+		Ga0059261_2838	0.75	+0.6
2,949,035	+		Ga0059261_2838	0.75	-0.4
2,949,035	+		Ga0059261_2838	0.75	+0.3
2,949,035	+		Ga0059261_2838	0.75	-0.6
2,949,035	+		Ga0059261_2838	0.75	+0.8
2,949,035	+		Ga0059261_2838	0.75	-0.1
2,949,035	+		Ga0059261_2838	0.75	-0.4
2,949,036	-		Ga0059261_2838	0.75	+0.0
2,949,036	-		Ga0059261_2838	0.75	+0.3
2,949,036	-		Ga0059261_2838	0.75	-0.5
2,949,036	-		Ga0059261_2838	0.75	+1.0
2,949,036	-		Ga0059261_2838	0.75	+0.7
2,949,036	-		Ga0059261_2838	0.75	-0.6
2,949,036	-		Ga0059261_2838	0.75	-3.1
2,949,036	-		Ga0059261_2838	0.75	+0.3
2,949,300	+				+0.3
2,949,300	+				+1.0
2,949,300	+				+0.3
2,949,300	+				+0.1
2,949,301	-				+0.0
2,949,470	+		Ga0059261_2839	0.16	-0.9
2,949,470	+		Ga0059261_2839	0.16	+1.7
2,949,470	+		Ga0059261_2839	0.16	+0.7
2,949,470	+		Ga0059261_2839	0.16	-0.1
2,949,470	+		Ga0059261_2839	0.16	-0.1
2,949,470	+		Ga0059261_2839	0.16	-0.1
2,949,470	+		Ga0059261_2839	0.16	+0.2
2,949,471	-		Ga0059261_2839	0.16	-0.5
2,949,471	-		Ga0059261_2839	0.16	-0.1
2,949,471	-		Ga0059261_2839	0.16	-0.3
2,949,471	-		Ga0059261_2839	0.16	+0.6
2,949,471	-		Ga0059261_2839	0.16	-0.7
2,949,547	-		Ga0059261_2839	0.21	-0.1