Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2641

Experiment: Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0005 mg/ml
2,735,636	+				+0.5
2,735,636	+				-0.4
2,735,637	-				-0.1
2,735,637	-				-0.1
2,735,895	+				+0.5
2,735,895	+				-0.2
2,735,895	+				-0.3
2,735,895	+				+0.4
2,735,895	+				-0.1
2,735,896	-				-1.0
2,735,896	-				-1.0
2,735,896	-				+0.5
2,735,924	+				+0.5
2,735,924	+				+0.2
2,735,932	+				-0.1
2,735,932	+				+1.2
2,735,932	+				+0.7
2,735,933	-				+0.1
2,735,939	+				+0.1
2,735,939	+				+0.9
2,735,939	+				-0.0
2,735,939	+				-0.9
2,735,939	+				+0.0
2,735,939	+				-0.5
2,735,940	-				+0.5
2,735,940	-				+0.0
2,735,940	-				-0.9
2,735,940	-				-0.2
2,735,940	-				-0.2
2,735,940	-				+0.2
2,735,940	-				-1.6
2,735,940	-				-0.2
2,735,940	-				+0.4
2,735,940	-				-0.2
2,735,940	-				-0.0
2,735,981	+				-0.4
2,735,981	+				+0.0
2,735,982	-				+0.3
2,735,982	-				-0.3
2,736,080	+		Ga0059261_2640	0.18	+0.0
2,736,080	+				+0.5
2,736,080	+		Ga0059261_2640	0.18	-0.1
2,736,080	+		Ga0059261_2640	0.18	+0.3
2,736,081	-		Ga0059261_2640	0.18	-0.1
2,736,081	-		Ga0059261_2640	0.18	-0.2
2,736,222	+		Ga0059261_2640	0.39	+0.6
2,736,223	-		Ga0059261_2640	0.40	-0.7
2,736,770	+		Ga0059261_2641	0.12	+0.5
2,736,770	+		Ga0059261_2641	0.12	+0.2
2,736,771	-		Ga0059261_2641	0.12	+0.9
2,736,771	-		Ga0059261_2641	0.12	+1.1
2,736,771	-		Ga0059261_2641	0.12	-1.4
2,736,771	-		Ga0059261_2641	0.12	+0.9
2,736,771	-		Ga0059261_2641	0.12	+0.0
2,736,771	-		Ga0059261_2641	0.12	-0.3
2,736,771	-		Ga0059261_2641	0.12	-0.4
2,736,771	-		Ga0059261_2641	0.12	-1.0
2,736,772	+		Ga0059261_2641	0.12	-2.4
2,736,772	+		Ga0059261_2641	0.12	-0.5
2,736,772	+		Ga0059261_2641	0.12	-1.3
2,736,772	+		Ga0059261_2641	0.12	-0.1
2,736,772	+		Ga0059261_2641	0.12	+0.1
2,736,773	-		Ga0059261_2641	0.12	+0.6
2,736,773	-		Ga0059261_2641	0.12	-0.2
2,736,773	-		Ga0059261_2641	0.12	-0.8
2,736,773	-		Ga0059261_2641	0.12	-0.0
2,736,773	-		Ga0059261_2641	0.12	+1.1
2,736,773	-		Ga0059261_2641	0.12	-0.8
2,736,773	-		Ga0059261_2641	0.12	+0.3
2,736,773	-		Ga0059261_2641	0.12	+0.2
2,736,773	-		Ga0059261_2641	0.12	-0.2
2,736,773	-		Ga0059261_2641	0.12	-0.5
2,736,782	+		Ga0059261_2641	0.13	-0.4
2,736,782	+		Ga0059261_2641	0.13	+0.5
2,736,783	-		Ga0059261_2641	0.13	+0.1
2,736,783	-		Ga0059261_2641	0.13	-0.2
2,736,980	+		Ga0059261_2641	0.29	-0.5
2,736,980	+		Ga0059261_2641	0.29	+0.4
2,736,980	+		Ga0059261_2641	0.29	-0.2
2,736,981	-		Ga0059261_2641	0.29	-0.2
2,736,981	-		Ga0059261_2641	0.29	-1.3
2,736,981	-		Ga0059261_2641	0.29	-0.9
2,736,981	-		Ga0059261_2641	0.29	-0.1
2,736,981	-		Ga0059261_2641	0.29	-0.1
2,736,981	-		Ga0059261_2641	0.29	-0.4
2,737,163	+		Ga0059261_2641	0.43	+0.4
2,737,163	+		Ga0059261_2641	0.43	+0.0
2,737,164	-		Ga0059261_2641	0.43	-0.1
2,737,164	-		Ga0059261_2641	0.43	+0.0
2,737,164	-		Ga0059261_2641	0.43	+0.2
2,737,164	-		Ga0059261_2641	0.43	-0.1
2,737,164	-		Ga0059261_2641	0.43	-0.3
2,737,284	+		Ga0059261_2641	0.53	-0.1
2,737,284	+		Ga0059261_2641	0.53	+1.6
2,737,284	+		Ga0059261_2641	0.53	+0.7
2,737,284	+		Ga0059261_2641	0.53	-0.2
2,737,284	+		Ga0059261_2641	0.53	-0.0
2,737,284	+		Ga0059261_2641	0.53	+0.7
2,737,284	+		Ga0059261_2641	0.53	+0.6
2,737,285	-		Ga0059261_2641	0.53	+0.3
2,737,285	-		Ga0059261_2641	0.53	+0.1
2,737,285	-		Ga0059261_2641	0.53	-1.8
2,737,285	-		Ga0059261_2641	0.53	+0.8
2,737,285	-		Ga0059261_2641	0.53	+0.6
2,737,304	+		Ga0059261_2641	0.55	-0.4
2,737,304	+		Ga0059261_2641	0.55	+0.0
2,737,305	-		Ga0059261_2641	0.55	-0.6
2,737,313	+		Ga0059261_2641	0.55	+0.9
2,737,313	+		Ga0059261_2641	0.55	+0.9
2,737,313	+		Ga0059261_2641	0.55	+0.2
2,737,313	+		Ga0059261_2641	0.55	+0.9
2,737,313	+		Ga0059261_2641	0.55	+0.3
2,737,313	+		Ga0059261_2641	0.55	+0.3
2,737,313	+		Ga0059261_2641	0.55	+0.4
2,737,314	-		Ga0059261_2641	0.55	-0.3
2,737,314	-		Ga0059261_2641	0.55	-0.3
2,737,314	-		Ga0059261_2641	0.55	+0.5
2,737,314	-		Ga0059261_2641	0.55	-0.0
2,737,314	-		Ga0059261_2641	0.55	-0.1
2,737,314	-		Ga0059261_2641	0.55	-0.0
2,737,400	+		Ga0059261_2641	0.62	+0.9
2,737,400	+		Ga0059261_2641	0.62	+1.2
2,737,400	+		Ga0059261_2641	0.62	+0.3
2,737,400	+		Ga0059261_2641	0.62	+0.6
2,737,401	-		Ga0059261_2641	0.62	-0.3
2,737,401	-		Ga0059261_2641	0.62	+0.0
2,737,401	-		Ga0059261_2641	0.62	-0.1
2,737,401	-		Ga0059261_2641	0.62	-0.4
2,737,401	-		Ga0059261_2641	0.62	+0.0
2,737,401	-		Ga0059261_2641	0.62	-0.7
2,737,401	-		Ga0059261_2641	0.62	-0.8
2,737,496	+		Ga0059261_2641	0.70	+0.3
2,737,497	-		Ga0059261_2641	0.70	+0.6
2,737,497	-		Ga0059261_2641	0.70	+0.0
2,737,664	+		Ga0059261_2641	0.83	+0.2
2,737,665	-		Ga0059261_2641	0.83	+0.3
2,737,739	+		Ga0059261_2641	0.89	+0.1
2,737,740	-		Ga0059261_2641	0.90	-0.1
2,737,740	-		Ga0059261_2641	0.90	+0.5
2,737,741	+		Ga0059261_2641	0.90	+1.0
2,737,741	+		Ga0059261_2641	0.90	+0.5
2,737,741	+		Ga0059261_2641	0.90	+1.5
2,737,741	+		Ga0059261_2641	0.90	+0.8
2,737,741	+		Ga0059261_2641	0.90	+1.7
2,737,741	+		Ga0059261_2641	0.90	+0.2
2,737,741	+		Ga0059261_2641	0.90	+0.0
2,737,741	+		Ga0059261_2641	0.90	-0.3
2,737,741	+		Ga0059261_2641	0.90	+0.9
2,737,742	-		Ga0059261_2641	0.90	+1.1
2,737,742	-		Ga0059261_2641	0.90	+0.8
2,737,742	-		Ga0059261_2641	0.90	+0.2
2,737,742	-		Ga0059261_2641	0.90	-1.1
2,737,742	-				+0.5
2,737,742	-		Ga0059261_2641	0.90	-1.9
2,737,763	+				+0.2
2,737,763	+				+0.3
2,737,763	+				+0.7
2,737,764	-				-0.1
2,737,764	-				+0.3
2,737,764	-				-0.0
2,737,764	-				-0.3
2,737,832	-				+0.1
2,737,987	+				-0.7
2,737,988	-				-0.8
2,738,074	+		Ga0059261_2642	0.10	+0.1
2,738,074	+		Ga0059261_2642	0.10	+0.1
2,738,075	-		Ga0059261_2642	0.10	+0.3
2,738,075	-		Ga0059261_2642	0.10	+0.1
2,738,075	-		Ga0059261_2642	0.10	-0.8
2,738,075	-		Ga0059261_2642	0.10	-0.7
2,738,110	+		Ga0059261_2642	0.12	+0.1
2,738,110	+		Ga0059261_2642	0.12	+0.3
2,738,110	+		Ga0059261_2642	0.12	+0.5
2,738,110	+		Ga0059261_2642	0.12	+0.4
2,738,111	-		Ga0059261_2642	0.12	+0.2
2,738,111	-		Ga0059261_2642	0.12	+0.0
2,738,111	-		Ga0059261_2642	0.12	+0.4
2,738,111	-				-1.1
2,738,111	-		Ga0059261_2642	0.12	+0.1
2,738,111	-		Ga0059261_2642	0.12	+0.3
2,738,155	+		Ga0059261_2642	0.14	+0.2
2,738,155	+		Ga0059261_2642	0.14	-0.7
2,738,155	+		Ga0059261_2642	0.14	-0.0
2,738,155	+		Ga0059261_2642	0.14	+0.1
2,738,155	+		Ga0059261_2642	0.14	+0.2
2,738,155	+		Ga0059261_2642	0.14	+0.5
2,738,155	+		Ga0059261_2642	0.14	-1.5
2,738,155	+		Ga0059261_2642	0.14	+0.4
2,738,155	+		Ga0059261_2642	0.14	-0.0
2,738,155	+		Ga0059261_2642	0.14	+0.1
2,738,155	+		Ga0059261_2642	0.14	-0.2
2,738,155	+		Ga0059261_2642	0.14	-0.1
2,738,156	-		Ga0059261_2642	0.14	-0.8
2,738,156	-		Ga0059261_2642	0.14	-0.3
2,738,156	-		Ga0059261_2642	0.14	+0.2
2,738,156	-				-0.7
2,738,156	-				+1.9
2,738,156	-		Ga0059261_2642	0.14	-0.3
2,738,218	+		Ga0059261_2642	0.17	-0.5
2,738,302	+		Ga0059261_2642	0.21	+0.8
2,738,407	+		Ga0059261_2642	0.26	+0.7
2,738,407	+		Ga0059261_2642	0.26	-0.8
2,738,407	+		Ga0059261_2642	0.26	+0.1
2,738,407	+		Ga0059261_2642	0.26	-0.1
2,738,407	+		Ga0059261_2642	0.26	+0.7
2,738,407	+		Ga0059261_2642	0.26	-0.3
2,738,407	+		Ga0059261_2642	0.26	-0.5
2,738,407	+		Ga0059261_2642	0.26	+0.5
2,738,407	+		Ga0059261_2642	0.26	+1.0
2,738,407	+		Ga0059261_2642	0.26	-0.3
2,738,407	+		Ga0059261_2642	0.26	+0.4
2,738,407	+		Ga0059261_2642	0.26	+0.3
2,738,408	-		Ga0059261_2642	0.26	-0.6
2,738,408	-		Ga0059261_2642	0.26	-0.2
2,738,408	-		Ga0059261_2642	0.26	-1.1
2,738,408	-		Ga0059261_2642	0.26	+0.3
2,738,408	-		Ga0059261_2642	0.26	-1.3
2,738,408	-		Ga0059261_2642	0.26	+0.2
2,738,408	-		Ga0059261_2642	0.26	-0.0
2,738,408	-		Ga0059261_2642	0.26	+0.2
2,738,497	+		Ga0059261_2642	0.31	-0.2
2,738,497	+		Ga0059261_2642	0.31	-0.3
2,738,497	+		Ga0059261_2642	0.31	+0.2
2,738,498	-		Ga0059261_2642	0.31	+0.6
2,738,498	-		Ga0059261_2642	0.31	+0.1
2,738,498	-		Ga0059261_2642	0.31	+1.1
2,738,498	-		Ga0059261_2642	0.31	-0.3
2,738,498	-		Ga0059261_2642	0.31	-0.7
2,738,512	+		Ga0059261_2642	0.31	-0.4
2,738,512	+		Ga0059261_2642	0.31	+1.5
2,738,512	+		Ga0059261_2642	0.31	-0.5
2,738,513	-		Ga0059261_2642	0.31	-0.6
2,738,513	-		Ga0059261_2642	0.31	+1.5
2,738,513	-		Ga0059261_2642	0.31	-0.1
2,738,513	-		Ga0059261_2642	0.31	-0.6
2,738,513	-		Ga0059261_2642	0.31	+0.2
2,738,513	-		Ga0059261_2642	0.31	+0.1
2,738,514	+		Ga0059261_2642	0.31	-0.8
2,738,514	+		Ga0059261_2642	0.31	+0.2
2,738,616	+		Ga0059261_2642	0.36	+1.3
2,738,616	+		Ga0059261_2642	0.36	+1.6
2,738,617	-		Ga0059261_2642	0.36	+0.3
2,738,710	+		Ga0059261_2642	0.41	-0.2
2,738,711	-		Ga0059261_2642	0.41	-0.1
2,738,752	+		Ga0059261_2642	0.43	-0.1
2,738,752	+		Ga0059261_2642	0.43	+0.4
2,738,752	+		Ga0059261_2642	0.43	+0.3
2,738,752	+		Ga0059261_2642	0.43	+2.0
2,738,752	+		Ga0059261_2642	0.43	+1.0
2,738,752	+		Ga0059261_2642	0.43	-0.3
2,738,752	+		Ga0059261_2642	0.43	+0.2
2,738,752	+		Ga0059261_2642	0.43	+0.5
2,738,752	+		Ga0059261_2642	0.43	+0.2
2,738,752	+		Ga0059261_2642	0.43	+0.4
2,738,752	+		Ga0059261_2642	0.43	-0.0
2,738,752	+		Ga0059261_2642	0.43	-1.1
2,738,752	+		Ga0059261_2642	0.43	+0.7
2,738,752	+		Ga0059261_2642	0.43	-0.4
2,738,752	+		Ga0059261_2642	0.43	+0.6
2,738,752	+		Ga0059261_2642	0.43	+0.3
2,738,753	-		Ga0059261_2642	0.43	-1.0
2,738,753	-		Ga0059261_2642	0.43	-0.2
2,738,753	-		Ga0059261_2642	0.43	+0.0
2,738,753	-		Ga0059261_2642	0.43	-0.9
2,738,753	-		Ga0059261_2642	0.43	+0.5
2,738,753	-		Ga0059261_2642	0.43	-0.7
2,738,753	-		Ga0059261_2642	0.43	-0.2
2,738,779	+		Ga0059261_2642	0.44	+0.7