Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2288

Experiment: Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0005 mg/ml
2,391,111	+		Ga0059261_2286	0.60	+0.3
2,391,111	+		Ga0059261_2286	0.60	-1.9
2,391,112	-				+0.0
2,391,112	-		Ga0059261_2286	0.61	-2.0
2,391,195	+		Ga0059261_2286	0.65	-0.3
2,391,195	+		Ga0059261_2286	0.65	+0.3
2,391,195	+		Ga0059261_2286	0.65	-0.6
2,391,195	+		Ga0059261_2286	0.65	+0.7
2,391,195	+		Ga0059261_2286	0.65	-1.2
2,391,196	-		Ga0059261_2286	0.65	+0.2
2,391,196	-		Ga0059261_2286	0.65	+0.1
2,391,196	-		Ga0059261_2286	0.65	-0.3
2,391,196	-		Ga0059261_2286	0.65	+0.4
2,391,414	+				-0.6
2,391,414	+		Ga0059261_2286	0.77	-0.1
2,391,414	+		Ga0059261_2286	0.77	+1.0
2,391,415	-		Ga0059261_2286	0.77	-0.4
2,391,415	-		Ga0059261_2286	0.77	+1.3
2,391,415	-		Ga0059261_2286	0.77	+0.3
2,391,415	-		Ga0059261_2286	0.77	+0.6
2,391,415	-		Ga0059261_2286	0.77	+1.0
2,391,451	-				-1.0
2,391,585	+		Ga0059261_2286	0.86	+0.6
2,391,585	+		Ga0059261_2286	0.86	-0.8
2,391,585	+		Ga0059261_2286	0.86	-1.7
2,391,585	+		Ga0059261_2286	0.86	-0.3
2,391,688	+				-0.6
2,391,688	+				-0.3
2,391,771	+				-1.0
2,391,771	+				-2.3
2,391,772	-				-0.2
2,391,772	-				+0.2
2,391,789	+				-1.1
2,391,789	+				+0.4
2,391,789	+				+1.0
2,391,789	+				-1.7
2,391,789	+				-1.0
2,391,789	+				-1.3
2,391,789	+				-0.9
2,391,790	-				+0.5
2,391,790	-				-0.3
2,391,810	+				+0.0
2,391,810	+				-0.5
2,391,810	+				-1.4
2,391,811	-				-2.0
2,391,811	-				+0.4
2,391,811	-				-1.6
2,391,837	+				+0.4
2,392,024	+				-0.6
2,392,024	+				-0.7
2,392,024	+				+0.6
2,392,024	+				-0.2
2,392,024	+				+1.0
2,392,024	+				+1.0
2,392,664	+				+0.8
2,392,664	+				-0.4
2,392,665	-				+0.5
2,392,774	+				+0.2
2,392,774	+				+3.0
2,392,774	+				-0.1
2,392,774	+				-0.0
2,392,774	+				-0.2
2,392,775	-				+0.7
2,392,775	-				-0.3
2,392,775	-				-0.9
2,392,775	-				-0.3
2,392,913	+		Ga0059261_2289	0.19	-1.3
2,392,913	+		Ga0059261_2289	0.19	-0.3
2,392,913	+		Ga0059261_2289	0.19	-0.1
2,392,913	+		Ga0059261_2289	0.19	+0.2
2,392,913	+		Ga0059261_2289	0.19	+0.3
2,392,913	+		Ga0059261_2289	0.19	+0.4
2,392,913	+				+0.0
2,392,914	-		Ga0059261_2289	0.19	+0.3
2,392,914	-		Ga0059261_2289	0.19	+0.4
2,392,914	-		Ga0059261_2289	0.19	+0.2
2,392,963	+		Ga0059261_2289	0.22	-0.3
2,392,963	+		Ga0059261_2289	0.22	+0.1
2,392,963	+		Ga0059261_2289	0.22	+0.2
2,392,963	+		Ga0059261_2289	0.22	+0.7
2,392,963	+		Ga0059261_2289	0.22	+0.2
2,392,964	-		Ga0059261_2289	0.22	-0.3
2,393,018	+		Ga0059261_2289	0.25	-1.5
2,393,018	+		Ga0059261_2289	0.25	+0.6
2,393,018	+		Ga0059261_2289	0.25	-0.1
2,393,018	+		Ga0059261_2289	0.25	+0.1
2,393,018	+		Ga0059261_2289	0.25	+1.3
2,393,019	-		Ga0059261_2289	0.26	-3.2
2,393,019	-		Ga0059261_2289	0.26	-0.1
2,393,020	+		Ga0059261_2289	0.26	+0.0
2,393,020	+		Ga0059261_2289	0.26	-0.1
2,393,020	+		Ga0059261_2289	0.26	-0.5
2,393,020	+		Ga0059261_2289	0.26	-0.2
2,393,021	-		Ga0059261_2289	0.26	-1.5
2,393,021	-		Ga0059261_2289	0.26	-0.5
2,393,021	-		Ga0059261_2289	0.26	+1.3
2,393,021	-		Ga0059261_2289	0.26	+0.3
2,393,021	-		Ga0059261_2289	0.26	+0.6
2,393,287	+		Ga0059261_2289	0.43	+1.0
2,393,287	+		Ga0059261_2289	0.43	-1.1
2,393,287	+		Ga0059261_2289	0.43	+0.3
2,393,287	+		Ga0059261_2289	0.43	+0.6
2,393,287	+		Ga0059261_2289	0.43	-0.5
2,393,287	+		Ga0059261_2289	0.43	+0.7
2,393,287	+		Ga0059261_2289	0.43	-0.4
2,393,287	+		Ga0059261_2289	0.43	+0.4
2,393,287	+		Ga0059261_2289	0.43	-2.7
2,393,288	-		Ga0059261_2289	0.43	+0.8
2,393,288	-		Ga0059261_2289	0.43	+0.5
2,393,288	-		Ga0059261_2289	0.43	-0.8
2,393,288	-		Ga0059261_2289	0.43	+0.0
2,393,363	+		Ga0059261_2289	0.48	-0.1
2,393,363	+		Ga0059261_2289	0.48	+0.4
2,393,363	+		Ga0059261_2289	0.48	+0.2
2,393,363	+				+1.0
2,393,363	+		Ga0059261_2289	0.48	-0.4
2,393,363	+		Ga0059261_2289	0.48	-0.8
2,393,363	+				+0.4
2,393,363	+		Ga0059261_2289	0.48	+0.5
2,393,363	+		Ga0059261_2289	0.48	-1.6
2,393,363	+		Ga0059261_2289	0.48	-0.2
2,393,363	+		Ga0059261_2289	0.48	-0.2
2,393,364	-		Ga0059261_2289	0.48	-0.2
2,393,364	-		Ga0059261_2289	0.48	+0.4
2,393,364	-		Ga0059261_2289	0.48	+1.3
2,393,364	-		Ga0059261_2289	0.48	-0.1
2,393,364	-		Ga0059261_2289	0.48	+0.1
2,393,364	-		Ga0059261_2289	0.48	-0.1
2,393,364	-		Ga0059261_2289	0.48	+0.2
2,393,364	-		Ga0059261_2289	0.48	+0.2
2,393,364	-		Ga0059261_2289	0.48	+0.0
2,393,364	-		Ga0059261_2289	0.48	+0.2
2,393,365	+		Ga0059261_2289	0.48	+0.7
2,393,365	+		Ga0059261_2289	0.48	+0.7
2,393,365	+		Ga0059261_2289	0.48	+0.4
2,393,365	+		Ga0059261_2289	0.48	+0.6
2,393,365	+		Ga0059261_2289	0.48	-0.3
2,393,365	+		Ga0059261_2289	0.48	+0.3
2,393,365	+		Ga0059261_2289	0.48	+0.3
2,393,366	-		Ga0059261_2289	0.48	-0.4
2,393,366	-		Ga0059261_2289	0.48	+1.2
2,393,366	-		Ga0059261_2289	0.48	+1.0
2,393,366	-		Ga0059261_2289	0.48	+0.4
2,393,366	-		Ga0059261_2289	0.48	-0.4
2,393,366	-		Ga0059261_2289	0.48	+0.4
2,393,382	+		Ga0059261_2289	0.49	-0.2
2,393,382	+		Ga0059261_2289	0.49	+0.6
2,393,383	-		Ga0059261_2289	0.49	-0.4
2,393,444	-		Ga0059261_2289	0.53	+0.2
2,393,535	+		Ga0059261_2289	0.59	+0.4