Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2271

Experiment: Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0005 mg/ml
2,373,227	+				+0.5
2,373,228	-				-0.8
2,373,667	-		Ga0059261_2270	0.44	+2.7
2,373,708	+		Ga0059261_2270	0.48	-0.2
2,373,708	+		Ga0059261_2270	0.48	+0.1
2,373,708	+		Ga0059261_2270	0.48	-0.7
2,373,709	-		Ga0059261_2270	0.48	+0.0
2,373,756	+		Ga0059261_2270	0.53	-1.3
2,373,756	+		Ga0059261_2270	0.53	+0.7
2,373,756	+		Ga0059261_2270	0.53	+0.1
2,373,756	+		Ga0059261_2270	0.53	+0.2
2,373,756	+		Ga0059261_2270	0.53	-0.6
2,373,756	+		Ga0059261_2270	0.53	-0.3
2,373,756	-		Ga0059261_2270	0.53	-0.9
2,373,757	-		Ga0059261_2270	0.53	+1.0
2,373,757	-		Ga0059261_2270	0.53	-0.6
2,373,757	-		Ga0059261_2270	0.53	-0.5
2,373,757	-		Ga0059261_2270	0.53	-0.6
2,374,259	+				-0.0
2,374,259	+				-0.4
2,374,259	+				-0.2
2,374,259	+				-2.0
2,374,259	+				-0.2
2,374,259	+				-0.4
2,374,259	+				-0.4
2,374,259	+				-0.1
2,374,259	+				+0.8
2,374,260	-				-0.4
2,374,260	-				-1.6
2,374,260	-				-0.5
2,374,260	-				+0.0
2,374,260	-				-0.0
2,374,260	-				-1.1
2,374,260	-				-0.1
2,374,260	-				+0.3
2,374,260	-				+0.2
2,374,260	-				-0.4
2,374,335	+		Ga0059261_2271	0.10	+0.4
2,374,658	+		Ga0059261_2271	0.35	-0.1
2,374,658	+		Ga0059261_2271	0.35	-0.7
2,374,659	-		Ga0059261_2271	0.35	+2.0
2,374,659	-		Ga0059261_2271	0.35	+1.5
2,374,659	-		Ga0059261_2271	0.35	+0.4
2,374,659	-		Ga0059261_2271	0.35	-1.1
2,374,659	-		Ga0059261_2271	0.35	-1.3
2,374,659	-		Ga0059261_2271	0.35	-0.3
2,374,659	-		Ga0059261_2271	0.35	-0.8
2,374,659	-		Ga0059261_2271	0.35	+0.1
2,374,659	-		Ga0059261_2271	0.35	+1.2
2,374,659	-		Ga0059261_2271	0.35	-0.7
2,374,808	+		Ga0059261_2271	0.47	-1.2
2,374,808	+		Ga0059261_2271	0.47	+0.2
2,374,808	+		Ga0059261_2271	0.47	+0.3
2,374,808	+		Ga0059261_2271	0.47	-0.1
2,374,808	+		Ga0059261_2271	0.47	-1.4
2,374,808	+		Ga0059261_2271	0.47	+0.5
2,374,809	-		Ga0059261_2271	0.47	-0.7
2,374,809	-		Ga0059261_2271	0.47	+1.7
2,374,809	-		Ga0059261_2271	0.47	+0.1
2,374,809	-		Ga0059261_2271	0.47	-0.9
2,374,809	-		Ga0059261_2271	0.47	+0.4
2,374,809	-		Ga0059261_2271	0.47	-0.1
2,374,809	-		Ga0059261_2271	0.47	-0.2
2,374,809	-		Ga0059261_2271	0.47	-1.2
2,374,925	+		Ga0059261_2271	0.56	-0.4
2,374,926	-		Ga0059261_2271	0.56	-1.0
2,374,926	-		Ga0059261_2271	0.56	-0.0
2,374,926	-		Ga0059261_2271	0.56	-0.2
2,374,943	+		Ga0059261_2271	0.58	-2.0
2,374,943	+		Ga0059261_2271	0.58	-0.8
2,374,943	+		Ga0059261_2271	0.58	+0.1
2,374,943	+		Ga0059261_2271	0.58	+2.0
2,374,944	-		Ga0059261_2271	0.58	-0.7
2,374,944	-		Ga0059261_2271	0.58	+0.9
2,375,548	+				-1.5
2,375,548	+				+0.7
2,375,548	+				-0.5
2,375,548	+				+0.1
2,375,549	-				-2.1
2,375,549	-				+0.1
2,375,549	-				-0.4
2,375,549	-				-0.5
2,375,549	-				+0.1
2,375,549	-				+0.1
2,375,620	+		Ga0059261_2272	0.12	+0.4
2,375,620	+		Ga0059261_2272	0.12	-0.6
2,375,620	+		Ga0059261_2272	0.12	-0.0
2,375,620	+		Ga0059261_2272	0.12	-0.3
2,375,621	-		Ga0059261_2272	0.12	-0.5
2,375,621	-		Ga0059261_2272	0.12	-0.2
2,375,621	-		Ga0059261_2272	0.12	+0.4
2,375,621	-		Ga0059261_2272	0.12	-0.6
2,375,831	-		Ga0059261_2272	0.32	-0.8
2,375,831	-		Ga0059261_2272	0.32	-0.2
2,375,894	-		Ga0059261_2272	0.38	+1.6
2,375,896	+		Ga0059261_2272	0.38	-0.3
2,375,896	+		Ga0059261_2272	0.38	+1.0
2,375,896	+		Ga0059261_2272	0.38	-0.2
2,375,896	+		Ga0059261_2272	0.38	+0.7
2,375,896	+		Ga0059261_2272	0.38	-0.6
2,375,896	+		Ga0059261_2272	0.38	+0.4
2,375,897	-		Ga0059261_2272	0.38	+0.1
2,375,897	-		Ga0059261_2272	0.38	-0.4
2,375,977	+		Ga0059261_2272	0.46	-0.6
2,375,977	+		Ga0059261_2272	0.46	-1.0
2,375,977	+				+1.4
2,375,977	+		Ga0059261_2272	0.46	-0.5
2,375,977	+		Ga0059261_2272	0.46	-0.2
2,375,977	+		Ga0059261_2272	0.46	+0.1
2,375,977	+		Ga0059261_2272	0.46	-1.1
2,375,977	+		Ga0059261_2272	0.46	-0.5
2,375,977	+		Ga0059261_2272	0.46	+0.2
2,375,977	+		Ga0059261_2272	0.46	-0.0
2,375,977	+		Ga0059261_2272	0.46	-0.3
2,375,978	-		Ga0059261_2272	0.46	-0.2
2,375,978	-		Ga0059261_2272	0.46	-1.3
2,375,978	-		Ga0059261_2272	0.46	-2.3
2,375,978	-		Ga0059261_2272	0.46	+0.3
2,376,052	+		Ga0059261_2272	0.53	+0.1
2,376,053	-		Ga0059261_2272	0.53	+0.8
2,376,053	-		Ga0059261_2272	0.53	+0.1
2,376,152	-		Ga0059261_2272	0.62	+0.3
2,376,199	+		Ga0059261_2272	0.66	+0.2
2,376,244	+		Ga0059261_2272	0.71	+0.0
2,376,245	-		Ga0059261_2272	0.71	-0.9
2,376,248	+		Ga0059261_2272	0.71	-0.3
2,376,248	+		Ga0059261_2272	0.71	+0.4
2,376,248	+		Ga0059261_2272	0.71	+0.6
2,376,248	+		Ga0059261_2272	0.71	-0.3
2,376,248	+		Ga0059261_2272	0.71	-0.3
2,376,248	+		Ga0059261_2272	0.71	+0.2
2,376,248	+		Ga0059261_2272	0.71	+0.2
2,376,248	+		Ga0059261_2272	0.71	+1.8
2,376,248	+		Ga0059261_2272	0.71	-0.3
2,376,248	+		Ga0059261_2272	0.71	-0.0
2,376,248	+		Ga0059261_2272	0.71	-0.8
2,376,248	+		Ga0059261_2272	0.71	-0.5
2,376,248	+		Ga0059261_2272	0.71	-0.0
2,376,248	+		Ga0059261_2272	0.71	-0.2
2,376,248	+		Ga0059261_2272	0.71	+0.3
2,376,248	+		Ga0059261_2272	0.71	-0.5
2,376,248	+		Ga0059261_2272	0.71	+0.3
2,376,248	+		Ga0059261_2272	0.71	-1.6
2,376,248	+		Ga0059261_2272	0.71	+0.1
2,376,248	+		Ga0059261_2272	0.71	+0.2
2,376,248	+		Ga0059261_2272	0.71	-0.6
2,376,248	+		Ga0059261_2272	0.71	-0.0
2,376,249	-		Ga0059261_2272	0.71	+0.8
2,376,249	-		Ga0059261_2272	0.71	+0.2
2,376,249	-		Ga0059261_2272	0.71	-0.5
2,376,249	-		Ga0059261_2272	0.71	-1.9
2,376,249	-		Ga0059261_2272	0.71	-0.5
2,376,249	-		Ga0059261_2272	0.71	+0.4
2,376,249	-		Ga0059261_2272	0.71	-0.4
2,376,249	-		Ga0059261_2272	0.71	-0.3
2,376,249	-		Ga0059261_2272	0.71	-1.1
2,376,249	-		Ga0059261_2272	0.71	+1.3
2,376,249	-		Ga0059261_2272	0.71	-0.5
2,376,249	-		Ga0059261_2272	0.71	+0.1
2,376,249	-		Ga0059261_2272	0.71	+0.4
2,376,249	-		Ga0059261_2272	0.71	-0.1
2,376,249	-		Ga0059261_2272	0.71	-0.9
2,376,249	-		Ga0059261_2272	0.71	-0.3
2,376,249	-		Ga0059261_2272	0.71	-2.9
2,376,249	-		Ga0059261_2272	0.71	-1.1
2,376,249	-		Ga0059261_2272	0.71	-0.2
2,376,249	-		Ga0059261_2272	0.71	+1.0
2,376,249	-		Ga0059261_2272	0.71	-0.5
2,376,249	-		Ga0059261_2272	0.71	+0.1
2,376,249	-		Ga0059261_2272	0.71	-0.2
2,376,249	-		Ga0059261_2272	0.71	+1.0
2,376,249	-		Ga0059261_2272	0.71	-0.8
2,376,249	-		Ga0059261_2272	0.71	-0.5
2,376,249	-		Ga0059261_2272	0.71	-0.2
2,376,249	-		Ga0059261_2272	0.71	+1.0
2,376,250	+		Ga0059261_2272	0.71	+0.2
2,376,250	+		Ga0059261_2272	0.71	-0.6
2,376,250	+		Ga0059261_2272	0.71	-1.3
2,376,250	+		Ga0059261_2272	0.71	+0.3
2,376,250	+		Ga0059261_2272	0.71	-1.2
2,376,250	+		Ga0059261_2272	0.71	-0.3
2,376,250	+		Ga0059261_2272	0.71	+0.2
2,376,250	+		Ga0059261_2272	0.71	-0.9
2,376,251	-		Ga0059261_2272	0.71	-1.1
2,376,251	-		Ga0059261_2272	0.71	+0.4
2,376,251	-		Ga0059261_2272	0.71	-0.8
2,376,251	-		Ga0059261_2272	0.71	-0.1
2,376,251	-		Ga0059261_2272	0.71	+1.0
2,376,251	-		Ga0059261_2272	0.71	-1.8
2,376,251	-		Ga0059261_2272	0.71	+0.4
2,376,251	-		Ga0059261_2272	0.71	-0.0
2,376,251	-		Ga0059261_2272	0.71	-0.4
2,376,251	-		Ga0059261_2272	0.71	-0.0
2,376,290	-		Ga0059261_2272	0.75	+0.1
2,376,409	+		Ga0059261_2272	0.86	-0.8
2,376,410	-		Ga0059261_2272	0.86	-0.1