Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1988

Experiment: Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0005 mg/ml
2,091,494	-		Ga0059261_1986	0.71	-1.3
2,091,642	+		Ga0059261_1986	0.83	-1.1
2,091,642	+		Ga0059261_1986	0.83	-0.9
2,091,643	-		Ga0059261_1986	0.83	-1.4
2,091,643	-		Ga0059261_1986	0.83	-2.1
2,091,643	-				+0.3
2,091,643	-		Ga0059261_1986	0.83	-0.2
2,091,645	+		Ga0059261_1986	0.83	+0.3
2,091,645	+				+1.9
2,091,645	+		Ga0059261_1986	0.83	-1.1
2,091,646	-		Ga0059261_1986	0.83	+1.2
2,091,672	+		Ga0059261_1986	0.85	+0.7
2,091,673	-		Ga0059261_1986	0.85	-1.0
2,091,673	-		Ga0059261_1986	0.85	-0.1
2,091,673	-		Ga0059261_1986	0.85	-0.1
2,091,673	-		Ga0059261_1986	0.85	-0.0
2,091,753	+				-0.4
2,091,792	-				+0.6
2,092,365	+				-0.8
2,092,365	+				-0.8
2,092,365	+				-2.7
2,092,366	-				-0.7
2,092,388	+				-0.7
2,092,389	-				-0.0
2,092,389	-				+0.5
2,092,389	-				+0.0
2,092,389	-				-0.2
2,092,389	-				+0.6
2,092,408	+				+0.8
2,092,408	+				-0.4
2,092,408	+				+0.3
2,092,409	-				-0.3
2,092,409	-				-0.6
2,092,561	+		Ga0059261_1988	0.29	-0.0
2,092,561	+		Ga0059261_1988	0.29	+0.3
2,092,706	+		Ga0059261_1988	0.60	+0.3
2,092,706	+		Ga0059261_1988	0.60	-2.2
2,092,706	+		Ga0059261_1988	0.60	-0.1
2,092,706	+		Ga0059261_1988	0.60	+0.7
2,092,706	+		Ga0059261_1988	0.60	+0.5
2,092,706	+		Ga0059261_1988	0.60	-0.5
2,092,706	+		Ga0059261_1988	0.60	+0.5
2,092,706	+		Ga0059261_1988	0.60	-0.2
2,092,706	+		Ga0059261_1988	0.60	+0.9
2,092,706	+		Ga0059261_1988	0.60	-0.3
2,092,706	+		Ga0059261_1988	0.60	+0.9
2,092,706	+		Ga0059261_1988	0.60	-0.1
2,092,706	+		Ga0059261_1988	0.60	+0.2
2,092,707	-		Ga0059261_1988	0.60	-1.1
2,092,707	-		Ga0059261_1988	0.60	-0.1
2,092,707	-		Ga0059261_1988	0.60	+1.1
2,092,707	-		Ga0059261_1988	0.60	+0.5
2,092,707	-		Ga0059261_1988	0.60	+0.9
2,092,832	+		Ga0059261_1988	0.87	-0.1
2,092,833	-		Ga0059261_1988	0.87	+0.6
2,092,880	+				-0.1
2,092,880	+				-0.0
2,092,881	-				+0.4
2,092,881	-				-0.3
2,092,881	-				-1.7
2,092,948	+				-1.2
2,092,948	+				+0.7
2,092,948	+				-0.2
2,092,948	+				-1.1
2,092,949	-				-0.1
2,092,949	-				+0.1
2,092,949	-				-0.4
2,092,953	+				-1.6
2,092,953	+				+0.3
2,092,953	+				+0.2
2,092,953	+				+1.2
2,092,953	+				-0.4
2,092,954	-				+0.5
2,092,954	-				-1.1
2,092,954	-				-0.6
2,092,954	-				-0.4
2,092,954	-				+0.4
2,092,954	-				+0.5
2,092,954	-				-1.0
2,093,009	+				-0.3
2,093,009	+				+0.4
2,093,010	-				-0.2
2,093,050	+				+0.1
2,093,050	+				-0.4
2,093,051	-				-0.8
2,093,051	-				+1.1
2,093,051	-				+0.2
2,093,051	-				+0.7
2,093,051	-				-0.1
2,093,051	-				-0.1
2,093,205	+				+0.0
2,093,205	+				+0.8
2,093,205	+				+0.9
2,093,205	+				-0.8
2,093,205	+				-1.9
2,093,206	-		Ga0059261_1989	0.10	-1.0
2,093,206	-		Ga0059261_1989	0.10	+0.5
2,093,206	-		Ga0059261_1989	0.10	-0.2
2,093,206	-		Ga0059261_1989	0.10	-0.5
2,093,206	-		Ga0059261_1989	0.10	+0.4
2,093,206	-		Ga0059261_1989	0.10	-0.3
2,093,206	-		Ga0059261_1989	0.10	-0.0
2,093,206	-		Ga0059261_1989	0.10	+0.2
2,093,206	-		Ga0059261_1989	0.10	-0.4
2,093,237	+		Ga0059261_1989	0.13	+0.2
2,093,310	+		Ga0059261_1989	0.18	-0.1
2,093,310	+		Ga0059261_1989	0.18	+0.2
2,093,310	+		Ga0059261_1989	0.18	-0.2
2,093,311	-		Ga0059261_1989	0.19	-0.4
2,093,311	-		Ga0059261_1989	0.19	+1.2
2,093,311	-		Ga0059261_1989	0.19	+0.4
2,093,311	-		Ga0059261_1989	0.19	-0.5
2,093,311	-		Ga0059261_1989	0.19	+0.1
2,093,311	-		Ga0059261_1989	0.19	+0.7
2,093,364	-				-1.7
2,093,364	-		Ga0059261_1989	0.23	+0.5
2,093,459	+		Ga0059261_1989	0.31	+0.8
2,093,460	-		Ga0059261_1989	0.31	+1.7
2,093,469	+		Ga0059261_1989	0.31	-0.1
2,093,469	+		Ga0059261_1989	0.31	-0.7
2,093,470	-		Ga0059261_1989	0.31	+1.0
2,093,514	+		Ga0059261_1989	0.35	-0.4
2,093,574	+		Ga0059261_1989	0.40	+0.5
2,093,574	+		Ga0059261_1989	0.40	-0.7
2,093,574	+		Ga0059261_1989	0.40	+1.3
2,093,574	+		Ga0059261_1989	0.40	-0.3
2,093,575	-				-0.1
2,093,575	-		Ga0059261_1989	0.40	-0.9
2,093,575	-		Ga0059261_1989	0.40	+0.8
2,093,575	-		Ga0059261_1989	0.40	-0.2
2,093,575	-		Ga0059261_1989	0.40	-0.1
2,093,631	+		Ga0059261_1989	0.44	-0.3
2,093,631	+		Ga0059261_1989	0.44	+0.7
2,093,631	+		Ga0059261_1989	0.44	-0.7
2,093,632	-		Ga0059261_1989	0.44	+0.0
2,093,632	-		Ga0059261_1989	0.44	+0.2
2,093,790	+		Ga0059261_1989	0.57	-0.6
2,093,790	+		Ga0059261_1989	0.57	-0.3
2,093,791	-		Ga0059261_1989	0.57	+0.4
2,093,886	+		Ga0059261_1989	0.65	+0.6
2,093,886	+		Ga0059261_1989	0.65	+0.1
2,093,886	+		Ga0059261_1989	0.65	-1.2
2,093,886	+		Ga0059261_1989	0.65	-0.1
2,093,887	-		Ga0059261_1989	0.65	+0.4
2,093,887	-		Ga0059261_1989	0.65	-0.1
2,093,887	-		Ga0059261_1989	0.65	+0.1
2,093,887	-		Ga0059261_1989	0.65	+0.2
2,093,887	-		Ga0059261_1989	0.65	+1.1
2,093,887	-		Ga0059261_1989	0.65	-0.6
2,093,887	-		Ga0059261_1989	0.65	-0.2
2,093,887	-		Ga0059261_1989	0.65	+0.0
2,093,887	-		Ga0059261_1989	0.65	+0.4
2,093,887	-				-0.1
2,093,887	-		Ga0059261_1989	0.65	-0.1
2,093,887	-		Ga0059261_1989	0.65	-0.1
2,093,887	-		Ga0059261_1989	0.65	-0.3