Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28950 and AO356_28955 are separated by 105 nucleotides AO356_28955 and AO356_28960 are separated by 268 nucleotides AO356_28960 and AO356_28965 are separated by 59 nucleotides
AO356_28950: AO356_28950 - LysR family transcriptional regulator, at 6,731,036 to 6,731,926
_28950
AO356_28955: AO356_28955 - hypothetical protein, at 6,732,032 to 6,732,301
_28955
AO356_28960: AO356_28960 - FMN reductase, at 6,732,570 to 6,733,133
_28960
AO356_28965: AO356_28965 - monooxygenase, at 6,733,193 to 6,734,380
_28965
Position (kb)
6732
6733
6734 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 6731.598 kb on + strand, within AO356_28950 at 6731.633 kb on + strand, within AO356_28950 at 6731.663 kb on + strand, within AO356_28950 at 6731.664 kb on - strand, within AO356_28950 at 6731.664 kb on - strand, within AO356_28950 at 6731.664 kb on - strand, within AO356_28950 at 6731.767 kb on + strand, within AO356_28950 at 6731.768 kb on - strand, within AO356_28950 at 6731.805 kb on + strand, within AO356_28950 at 6731.806 kb on - strand, within AO356_28950 at 6731.885 kb on + strand at 6732.034 kb on - strand at 6732.082 kb on + strand, within AO356_28955 at 6732.141 kb on + strand, within AO356_28955 at 6732.141 kb on + strand, within AO356_28955 at 6732.142 kb on - strand, within AO356_28955 at 6732.201 kb on + strand, within AO356_28955 at 6732.333 kb on - strand at 6732.354 kb on - strand at 6732.354 kb on - strand at 6732.533 kb on - strand at 6732.533 kb on - strand at 6732.533 kb on - strand at 6732.533 kb on - strand at 6732.536 kb on + strand at 6732.566 kb on + strand at 6733.029 kb on + strand, within AO356_28960 at 6733.815 kb on + strand, within AO356_28965 at 6733.856 kb on - strand, within AO356_28965 at 6733.919 kb on - strand, within AO356_28965 at 6733.953 kb on - strand, within AO356_28965 at 6734.015 kb on + strand, within AO356_28965 at 6734.015 kb on + strand, within AO356_28965 at 6734.015 kb on + strand, within AO356_28965 at 6734.015 kb on + strand, within AO356_28965 at 6734.015 kb on + strand, within AO356_28965 at 6734.016 kb on - strand, within AO356_28965 at 6734.016 kb on - strand, within AO356_28965 at 6734.016 kb on - strand, within AO356_28965
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 6,731,598 + AO356_28950 0.63 +0.2 6,731,633 + AO356_28950 0.67 +0.4 6,731,663 + AO356_28950 0.70 +0.8 6,731,664 - AO356_28950 0.70 +1.3 6,731,664 - AO356_28950 0.70 +0.0 6,731,664 - AO356_28950 0.70 +0.7 6,731,767 + AO356_28950 0.82 +0.3 6,731,768 - AO356_28950 0.82 -2.9 6,731,805 + AO356_28950 0.86 -0.2 6,731,806 - AO356_28950 0.86 +0.3 6,731,885 + +0.2 6,732,034 - -0.3 6,732,082 + AO356_28955 0.19 +1.1 6,732,141 + AO356_28955 0.40 +0.8 6,732,141 + AO356_28955 0.40 -0.2 6,732,142 - AO356_28955 0.41 +0.2 6,732,201 + AO356_28955 0.63 +1.0 6,732,333 - +0.1 6,732,354 - -0.1 6,732,354 - +0.1 6,732,533 - -0.2 6,732,533 - +0.1 6,732,533 - -0.2 6,732,533 - +0.3 6,732,536 + -0.5 6,732,566 + +0.9 6,733,029 + AO356_28960 0.81 -0.7 6,733,815 + AO356_28965 0.52 +0.2 6,733,856 - AO356_28965 0.56 -0.5 6,733,919 - AO356_28965 0.61 +0.1 6,733,953 - AO356_28965 0.64 +0.1 6,734,015 + AO356_28965 0.69 -0.3 6,734,015 + AO356_28965 0.69 +0.4 6,734,015 + AO356_28965 0.69 +0.5 6,734,015 + AO356_28965 0.69 -0.3 6,734,015 + AO356_28965 0.69 +0.7 6,734,016 - AO356_28965 0.69 -0.2 6,734,016 - AO356_28965 0.69 +0.1 6,734,016 - AO356_28965 0.69 +0.4
Or see this region's nucleotide sequence