Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16430 and AO356_16435 are separated by 481 nucleotides AO356_16435 and AO356_16440 are separated by 3 nucleotides
AO356_16430: AO356_16430 - ABC transporter substrate-binding protein, at 3,714,235 to 3,715,248
_16430
AO356_16435: AO356_16435 - hypothetical protein, at 3,715,730 to 3,716,173
_16435
AO356_16440: AO356_16440 - hypothetical protein, at 3,716,177 to 3,716,764
_16440
Position (kb)
3715
3716
3717 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3714.755 kb on + strand, within AO356_16430 at 3714.755 kb on + strand, within AO356_16430 at 3714.755 kb on + strand, within AO356_16430 at 3714.755 kb on + strand, within AO356_16430 at 3714.756 kb on - strand, within AO356_16430 at 3714.756 kb on - strand, within AO356_16430 at 3714.756 kb on - strand, within AO356_16430 at 3714.810 kb on + strand, within AO356_16430 at 3715.010 kb on + strand, within AO356_16430 at 3715.010 kb on + strand, within AO356_16430 at 3715.011 kb on - strand, within AO356_16430 at 3715.011 kb on - strand, within AO356_16430 at 3715.076 kb on + strand, within AO356_16430 at 3715.077 kb on - strand, within AO356_16430 at 3715.077 kb on - strand, within AO356_16430 at 3715.270 kb on + strand at 3715.270 kb on + strand at 3715.270 kb on + strand at 3715.271 kb on - strand at 3715.493 kb on + strand at 3715.493 kb on + strand at 3715.493 kb on + strand at 3715.493 kb on + strand at 3715.494 kb on - strand at 3715.494 kb on - strand at 3715.494 kb on - strand at 3715.494 kb on - strand at 3715.494 kb on - strand at 3715.546 kb on + strand at 3715.549 kb on + strand at 3715.549 kb on + strand at 3715.549 kb on + strand at 3715.550 kb on - strand at 3715.550 kb on - strand at 3715.550 kb on - strand at 3715.581 kb on + strand at 3715.582 kb on - strand at 3715.598 kb on + strand at 3715.598 kb on + strand at 3715.599 kb on - strand at 3715.638 kb on - strand at 3715.688 kb on + strand at 3715.688 kb on + strand at 3715.689 kb on - strand at 3715.739 kb on + strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.740 kb on - strand at 3715.765 kb on - strand at 3716.007 kb on - strand, within AO356_16435 at 3716.007 kb on - strand, within AO356_16435 at 3716.087 kb on - strand, within AO356_16435 at 3716.125 kb on + strand, within AO356_16435 at 3716.161 kb on + strand at 3716.161 kb on + strand at 3716.162 kb on - strand at 3716.162 kb on - strand at 3716.162 kb on - strand at 3716.162 kb on - strand at 3716.172 kb on - strand at 3716.176 kb on + strand at 3716.176 kb on + strand at 3716.176 kb on + strand at 3716.176 kb on + strand at 3716.176 kb on + strand at 3716.176 kb on + strand at 3716.177 kb on - strand at 3716.177 kb on - strand at 3716.177 kb on - strand at 3716.183 kb on + strand at 3716.183 kb on + strand at 3716.183 kb on + strand at 3716.183 kb on + strand at 3716.183 kb on + strand at 3716.183 kb on + strand at 3716.183 kb on + strand at 3716.184 kb on - strand at 3716.184 kb on - strand at 3716.184 kb on - strand at 3716.184 kb on - strand at 3716.184 kb on - strand at 3716.184 kb on - strand at 3716.184 kb on - strand at 3716.222 kb on + strand at 3716.519 kb on + strand, within AO356_16440 at 3716.519 kb on + strand, within AO356_16440 at 3716.519 kb on + strand, within AO356_16440 at 3716.519 kb on + strand, within AO356_16440 at 3716.520 kb on - strand, within AO356_16440 at 3716.520 kb on - strand, within AO356_16440 at 3716.520 kb on - strand, within AO356_16440 at 3716.520 kb on - strand, within AO356_16440 at 3716.520 kb on - strand, within AO356_16440 at 3716.529 kb on + strand, within AO356_16440 at 3716.530 kb on - strand, within AO356_16440 at 3716.530 kb on - strand, within AO356_16440 at 3716.706 kb on + strand at 3716.706 kb on + strand at 3716.744 kb on + strand at 3716.744 kb on + strand at 3716.745 kb on - strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.748 kb on + strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.749 kb on - strand at 3716.753 kb on + strand at 3716.754 kb on - strand at 3716.754 kb on - strand at 3716.754 kb on - strand at 3716.762 kb on + strand at 3716.763 kb on - strand at 3716.778 kb on + strand at 3716.778 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 3,714,755 + AO356_16430 0.51 +0.1 3,714,755 + AO356_16430 0.51 -1.3 3,714,755 + AO356_16430 0.51 +0.5 3,714,755 + AO356_16430 0.51 +0.3 3,714,756 - AO356_16430 0.51 -0.3 3,714,756 - AO356_16430 0.51 -1.6 3,714,756 - AO356_16430 0.51 -0.2 3,714,810 + AO356_16430 0.57 +1.3 3,715,010 + AO356_16430 0.76 -0.2 3,715,010 + AO356_16430 0.76 +0.5 3,715,011 - AO356_16430 0.77 +0.1 3,715,011 - AO356_16430 0.77 +0.6 3,715,076 + AO356_16430 0.83 -1.7 3,715,077 - AO356_16430 0.83 +0.0 3,715,077 - AO356_16430 0.83 +0.5 3,715,270 + -1.9 3,715,270 + +0.8 3,715,270 + -0.7 3,715,271 - +0.3 3,715,493 + +0.8 3,715,493 + -1.0 3,715,493 + -0.1 3,715,493 + -0.4 3,715,494 - -0.4 3,715,494 - +0.5 3,715,494 - -1.7 3,715,494 - +1.2 3,715,494 - -0.8 3,715,546 + +0.5 3,715,549 + +0.8 3,715,549 + +0.1 3,715,549 + -0.7 3,715,550 - +0.5 3,715,550 - +0.7 3,715,550 - +0.4 3,715,581 + -0.6 3,715,582 - +0.2 3,715,598 + +0.4 3,715,598 + -0.3 3,715,599 - +0.7 3,715,638 - +0.2 3,715,688 + -0.2 3,715,688 + -0.5 3,715,689 - -0.4 3,715,739 + -0.2 3,715,740 - +0.2 3,715,740 - -0.2 3,715,740 - +0.7 3,715,740 - +0.6 3,715,740 - +0.1 3,715,740 - +0.8 3,715,740 - -1.8 3,715,740 - -0.5 3,715,740 - -1.4 3,715,740 - +1.1 3,715,740 - -0.4 3,715,765 - -0.5 3,716,007 - AO356_16435 0.62 -0.4 3,716,007 - AO356_16435 0.62 -0.3 3,716,087 - AO356_16435 0.80 -0.6 3,716,125 + AO356_16435 0.89 -0.3 3,716,161 + +0.6 3,716,161 + +1.0 3,716,162 - +0.1 3,716,162 - -1.3 3,716,162 - +0.2 3,716,162 - -0.3 3,716,172 - -2.8 3,716,176 + +0.1 3,716,176 + -0.4 3,716,176 + -0.3 3,716,176 + -1.0 3,716,176 + +0.0 3,716,176 + -0.3 3,716,177 - +0.8 3,716,177 - +0.1 3,716,177 - +0.8 3,716,183 + +0.9 3,716,183 + +1.0 3,716,183 + +0.0 3,716,183 + +0.5 3,716,183 + +0.8 3,716,183 + +0.7 3,716,183 + -0.9 3,716,184 - -1.1 3,716,184 - -0.6 3,716,184 - -0.5 3,716,184 - +0.3 3,716,184 - +0.6 3,716,184 - -0.0 3,716,184 - +0.2 3,716,222 + -0.3 3,716,519 + AO356_16440 0.58 +0.0 3,716,519 + AO356_16440 0.58 -0.1 3,716,519 + AO356_16440 0.58 +0.8 3,716,519 + AO356_16440 0.58 -0.4 3,716,520 - AO356_16440 0.58 -0.6 3,716,520 - AO356_16440 0.58 -0.1 3,716,520 - AO356_16440 0.58 +0.6 3,716,520 - AO356_16440 0.58 +0.6 3,716,520 - AO356_16440 0.58 +0.4 3,716,529 + AO356_16440 0.60 +0.5 3,716,530 - AO356_16440 0.60 -0.3 3,716,530 - AO356_16440 0.60 +0.4 3,716,706 + -0.5 3,716,706 + +0.2 3,716,744 + -0.1 3,716,744 + -0.4 3,716,745 - +0.1 3,716,748 + +0.8 3,716,748 + +0.4 3,716,748 + +0.3 3,716,748 + -0.6 3,716,748 + +0.2 3,716,748 + -0.3 3,716,748 + +0.6 3,716,748 + +0.1 3,716,748 + -0.0 3,716,748 + -1.1 3,716,748 + -0.4 3,716,749 - -2.1 3,716,749 - -2.5 3,716,749 - -0.1 3,716,749 - -0.3 3,716,749 - +0.1 3,716,749 - +0.5 3,716,749 - +0.6 3,716,749 - -0.1 3,716,749 - +1.1 3,716,749 - -0.3 3,716,749 - +0.9 3,716,749 - -1.0 3,716,749 - -0.1 3,716,753 + +0.1 3,716,754 - +0.4 3,716,754 - -0.6 3,716,754 - +0.0 3,716,762 + -0.9 3,716,763 - -0.4 3,716,778 + +1.6 3,716,778 + +0.1
Or see this region's nucleotide sequence